EBG00000313325 - n.1275C>T
Drug resistance types
16 Sensitive
14 RR-TB
11 HR-TB
8 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| lineage4.8 | 14 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage3 | 5 |
| lineage4 | 5 |
| lineage4.1.2 | 3 |
| lineage2.2.1 | 5 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2.1 | 4 |
| lineage4.3.3 | 3 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 2 |
| La1.8.1 | 1 |
| lineage4.2.1 | 2 |
| La1.3 | 3 |
| lineage3.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176780 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4814610 | Sensitive | lineage3 | None | ERR2228965 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4816001 | Other | lineage3 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR2229801 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820484 | Other | lineage4.8 | None | ERR2514679 | HR-TB | lineage2.2.1 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045432 | Other | lineage3 | gb | SRR6045683 | Other | lineage3.1.2 | None | SRR6045572 | Sensitive | lineage4.6.3 | gb | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046737 | Other | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR6982246 | Sensitive | lineage4 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR8600288 | Other | La1.8.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR4769516 | Other | La1.3 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769453 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4797971 | XDR-TB | lineage2.2.1 | in | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR987719 | HR-TB | lineage3 | None | ERR9787000 | Sensitive | lineage4.1.2.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR10272566 | Other | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972206 | HR-TB | lineage1.1.3.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR20139552 | MDR-TB | lineage4.1.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None |
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