EBG00000313325 - n.1275C>T
Drug resistance types
13 Sensitive
26 RR-TB
4 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 42 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 9 |
| lineage2.2.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2.1 | 2 |
| La1.3 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3 | 2 |
| lineage3.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR978694 | Other | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR3283033 | Sensitive | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR978747 | Other | lineage4.8 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR7236134 | Other | La1.8.1 | None | ERR978762 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR978727 | Other | lineage4.8 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR9787000 | Sensitive | lineage4.1.2.1 | None | ERR978751 | Other | lineage4.8 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR911929 | Other | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4769517 | Other | La1.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR323048 | Sensitive | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR987719 | HR-TB | lineage3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR978735 | Other | lineage4.8 | None | ERR4814610 | Sensitive | lineage3 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR978693 | Other | lineage4.8 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR978752 | Other | lineage4.8 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None |
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