EBG00000313325 - n.1438T>C


Drug resistance types
21 Sensitive 28 RR-TB 19 HR-TB 43 MDR-TB 28 Pre-XDR-TB 1 XDR-TB 116 Other
lineage Counts
lineage Count
lineage4.9 40
lineage4.2.2 1
lineage4.2.2.2 3
lineage4.8 15
lineage2.2.1 38
lineage4.1.2.1 17
lineage2.2.1.1 3
lineage4.1.1 2
lineage6.1.3 1
lineage3 5
lineage4.3.3 8
lineage3.1.2.2 1
lineage4.3.1.1 3
lineage4.1 1
lineage1.1.3.1 3
lineage4.6 3
lineage4.2.1.1 1
lineage4 10
lineage4.1.1.3 3
La1.8.1 10
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.2.1 7
lineage4.3.4.1 4
lineage4.7 3
lineage4.3.4.2.1 3
lineage1.1.1.1 2
lineage2.2.2 3
lineage4.2.1;lineage2.2.1 1
lineage4.3.4 2
lineage6.2.3;lineage1.1.2 1
7
lineage4.4.1.1 6
lineage4.9;La1.8.1 1
lineage3.1.1 3
lineage4.2.2.1 3
La1.2 1
La1.3 6
lineage4.9;La1.3 1
lineage4.4.2 2
lineage4.5;lineage2.2.1 1
lineage4.3.2 1
lineage4.6.5 2
lineage1.2.2.2 1
lineage5.1.1 1
lineage4.1.1.2 1
lineage6 1
lineage1.2.1.2 2
lineage4.6.1.2 5
lineage1.1.1 1
lineage4.5 3
lineage4.4 1
lineage4.6.2.2 1
lineage2.2 3
lineage3.1.3 1
lineage1.1.2 1
lineage4.1.1.3.1 2
lineage4.8.2 1
spoligotype Counts
spoligotype Count
None 256
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820284 Other lineage4.9 None
ERR4820318 Other lineage4.2.2 None
ERR4820338 Other lineage4.2.2.2 None
ERR4820484 Other lineage4.8 None
ERR4820369 Other lineage2.2.1 None
ERR4819842 Other lineage4.1.2.1 None
SRR6152838 Other lineage2.2.1.1 ca
SRR6046089 Other lineage4.1.2.1 None
ERR4819910 Other lineage4.9 None
ERR4821796 Other lineage4.1.1 None
ERR4821811 RR-TB lineage4.9 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6045496 Other lineage6.1.3 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR4821276 Other lineage3 None
SRR5818388 Other lineage4.9 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045642 Other lineage3.1.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045396 Other lineage4.3.1.1 None
ERR2517074 Pre-XDR-TB lineage3 gb
ERR4829232 Other lineage1.1.3.1 None
ERR4828805 Other lineage4.6 None
ERR4830888 Pre-XDR-TB lineage2.2.1 None
SRR6397640 Other lineage4.2.1.1 None
SRR6045002 MDR-TB lineage4.9 None
ERR4829336 Other lineage4 None
ERR4828811 Other lineage4.1.1 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR7585400 MDR-TB lineage3 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR4816800 Other lineage4.8 gb
ERR4831863 HR-TB lineage2.2.1.1 None
ERR5087486 Other La1.8.1 None
ERR5087596 Other La1.8.1 None
SRR7131132 Other lineage1.1.3.1 None
SRR7131296 Other lineage4.3.3 None
SRR9970980 Other lineage4.1.2 None
SRR6982246 Sensitive lineage4 None
SRR6832644 Other lineage4.3.3 None
ERR5087846 Other La1.8.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645973 Other lineage4.3.4.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645971 Other lineage2.2.1 None
SRR7645974 Other lineage4.3.4.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971065 RR-TB lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR8649119 Other lineage4.6 None
SRR9971080 RR-TB lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR036207 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755657 Other lineage4.8 None
SRR9971113 Other lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
DRR185000 Other lineage1.1.1.1 None
DRR185024 Other lineage2.2.2 None
SRR7755652 Pre-XDR-TB lineage4.2.1;lineage2.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR037234 Sensitive lineage4.9 None
ERR10796563 Other lineage4.3.3 None
ERR10762318 Pre-XDR-TB lineage2.2.1 None
ERR10796580 RR-TB lineage4.6 None
ERR10796576 RR-TB lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796574 Other lineage4.9 None
ERR10796626 Other lineage4.1.2 None
ERR3283033 Sensitive lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR10796633 RR-TB lineage4.3.4 None
ERR3283008 Other lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3283051 Other lineage4.9 None
ERR4822150 Other lineage4.8 gb
ERR3439265 Other lineage4.9 None
ERR3283043 Other lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439225 Other La1.8.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR3797063 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR4352121 MDR-TB lineage2.2.1 None
ERR4187652 Other lineage4.9 None
ERR4187671 Other lineage4.9;La1.8.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4407557 Pre-XDR-TB lineage4.2.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769423 Other La1.3 None
ERR4769436 Other La1.3 None
ERR4769472 Other lineage4.9 None
ERR4769453 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769495 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4796351 MDR-TB lineage4.9 None
ERR4769518 Sensitive lineage4.9 None
ERR4769539 Sensitive lineage4.9 None
ERR4769553 RR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4811101 Other lineage4.4.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR6397174 MDR-TB lineage4.1.2.1 None
ERR6397203 MDR-TB lineage4.1.2.1 None
ERR6197028 Other lineage4.9 None
ERR6865446 Other lineage4.4.1.1 None
ERR6866241 Other lineage4.3.2 None
ERR7801176 RR-TB lineage4.6.5 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR751345 Other lineage5.1.1 None
ERR7801175 RR-TB lineage4.6.5 None
ERR212114 Other lineage4.3.4.2.1 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR9117676 Other lineage4.2.2.2 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9787033 Sensitive lineage6 None
ERR987707 MDR-TB lineage4.7 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR1173515 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1175474 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175491 MDR-TB lineage4 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR11972435 Sensitive lineage1.1.1 None
SRR11972327 Pre-XDR-TB lineage2.2.1 None
SRR14801720 RR-TB lineage4.8 None
SRR12830402 Sensitive lineage4.3.3 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR16149126 MDR-TB lineage4.2.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR15508556 Other lineage4.3.4.1 None
SRR16157123 Other lineage4.9 None
SRR16156804 RR-TB lineage4.9 None
SRR16370616 Sensitive lineage4.5 None
SRR16627752 RR-TB lineage4.4 None
SRR1792022 Other La1.8.1 None
SRR1792011 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
SRR1792025 Other La1.8.1 None
SRR1792012 Other La1.8.1 None
SRR19317530 Sensitive lineage4.5 None
SRR18909918 Other lineage2.2.1.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR18213721 Other lineage4.8 None
SRR21240055 Other lineage4.1.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969542 Other lineage4.4.2 None
SRR22424765 MDR-TB lineage4 None
SRR21240161 Sensitive lineage4.1.2.1 None
ERR4815310 Other None
ERR4815193 MDR-TB lineage4.8 None
ERR4814312 Other lineage4 None
ERR4815118 Other lineage2.2 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR161039 Sensitive lineage4.3.4 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR1750889 Other lineage4.4.1.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR181744 HR-TB None
SRR3675236 HR-TB None
ERR4814821 Other lineage2.2.1 None
ERR1750907 RR-TB None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR212123 Other None
ERR4815550 Other lineage4 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815040 Other lineage4.2.2.2 None
ERR4815577 Other lineage3.1.3 None
ERR2027257 Other lineage4.1.2.1 None
ERR212034 HR-TB None
ERR4815572 Other lineage4.1.2.1 None
SRR3675547 Other lineage4.9 None
ERR4816549 Other lineage2.2.1 None
ERR4816397 Other lineage1.1.2 None
ERR4816548 MDR-TB lineage4.5 None
ERR4817127 Other lineage4.1.2.1 None
ERR2229198 MDR-TB lineage4.8 None
ERR2229233 Sensitive lineage4 None
ERR2229234 RR-TB lineage4.8 None
ERR4816781 Sensitive lineage4.8 None
ERR4817189 Other lineage4.7 None
ERR4816755 Other lineage4.1.1.3 None
ERR4818646 Sensitive lineage4.1.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4819002 HR-TB lineage4.8 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR2513223 Other lineage4.1.2.1 None
ERR2513401 HR-TB lineage3 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR1750885 Sensitive lineage2.2.1 zw
ERR4818930 Other lineage4.1.2.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818583 Other lineage4.3.3 None
SRR5007168 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4819096 Other lineage4.4.1.1 None
ERR4820265 Other lineage4.1.2.1 None
ERR4820266 RR-TB lineage3 None