EBG00000313325 - n.1438T>C
Drug resistance types
23 Sensitive
29 RR-TB
20 HR-TB
43 MDR-TB
28 Pre-XDR-TB
1 XDR-TB
129 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 10 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.1 | 4 |
| lineage4.3.3 | 10 |
| lineage1.1.3.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 3 |
| lineage3 | 8 |
| lineage2.2.1 | 39 |
| lineage4.7 | 3 |
| lineage4.8 | 19 |
| lineage4.2.1 | 7 |
| lineage4.6 | 3 |
| lineage4.1.2.1 | 17 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.9 | 41 |
| lineage1.1.1.1 | 2 |
| lineage2.2.2 | 3 |
| lineage4.3.4 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4 | 10 |
| 7 | |
| lineage4.4.1.1 | 7 |
| lineage4.9;La1.8.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.2.2.1 | 3 |
| La1.2 | 1 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.5 | 2 |
| lineage6 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2.2 | 3 |
| lineage1.2.1.2 | 2 |
| lineage4.6.1.2 | 5 |
| lineage1.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.5 | 3 |
| lineage4.6.2.2 | 1 |
| lineage2.2 | 3 |
| lineage3.1.3 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.1.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 273 |
Geographic prevalence
Country level data for this variant is available for 24 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5087846 | Other | La1.8.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR7131296 | Other | lineage4.3.3 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131132 | Other | lineage1.1.3.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645974 | Other | lineage4.3.4.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR036207 | Other | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3439225 | Other | La1.8.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR400319 | Other | lineage4.8 | gb | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4352121 | MDR-TB | lineage2.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4407557 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR6197028 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6397174 | MDR-TB | lineage4.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR6397203 | MDR-TB | lineage4.1.2.1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972435 | Sensitive | lineage1.1.1 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR12830402 | Sensitive | lineage4.3.3 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16370616 | Sensitive | lineage4.5 | None | SRR16156775 | Other | lineage4.9 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR1792025 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19317530 | Sensitive | lineage4.5 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | ERR4815118 | Other | lineage2.2 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR4814312 | Other | lineage4 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR181744 | HR-TB | None | ERR4815310 | Other | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR1750883 | Sensitive | lineage3 | zw | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675236 | HR-TB | None | ERR1750907 | RR-TB | None | ERR4814821 | Other | lineage2.2.1 | None | ERR1750885 | Sensitive | lineage2.2.1 | zw | ERR1750926 | Other | lineage4.3.2.1 | za | ERR4815040 | Other | lineage4.2.2.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815577 | Other | lineage3.1.3 | None | SRR3675547 | Other | lineage4.9 | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817127 | Other | lineage4.1.2.1 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4817382 | Other | lineage4.9 | gb | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4817189 | Other | lineage4.7 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816781 | Sensitive | lineage4.8 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4817948 | Other | lineage3 | gb | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818694 | RR-TB | lineage2.2.1 | gb | ERR2512961 | Sensitive | lineage4.1.1 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR4818180 | Other | lineage4.8 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR2513223 | Other | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818930 | Other | lineage4.1.2.1 | None | ERR2512689 | Other | lineage4.3.3 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2513688 | Other | lineage1.1.2 | gb | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR4820266 | RR-TB | lineage3 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR2513949 | Other | lineage3 | gb | ERR2514345 | Other | lineage4.8 | gb | ERR4820369 | Other | lineage2.2.1 | None | ERR4819588 | Other | lineage4.8 | gb | ERR4820338 | Other | lineage4.2.2.2 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821276 | Other | lineage3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4829336 | Other | lineage4 | None | ERR4829232 | Other | lineage1.1.3.1 | None | SRR6045396 | Other | lineage4.3.1.1 | None | ERR4828805 | Other | lineage4.6 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828811 | Other | lineage4.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3 | None |
|---|
