EBG00000313325 - n.829T>A
Drug resistance types
6 Sensitive
9 RR-TB
4 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 7 |
| La1.8.1 | 4 |
| lineage4.1.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.2.1 | 2 |
| lineage2.2.1 | 9 |
| lineage4.2.1.1 | 2 |
| lineage3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797062 | RR-TB | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR5163959 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR7236399 | Other | La1.8.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR6044952 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR10809005 | Sensitive | lineage4.9 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4769517 | Other | La1.3 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR14801720 | Other | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za |
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