EBG00000313325 - n.1181T>C
Drug resistance types
173 Sensitive
14 RR-TB
23 HR-TB
16 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 9 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.8.1 | 1 |
| lineage2.2.1 | 17 |
| lineage4.3.2.1 | 4 |
| lineage4.9 | 219 |
| lineage4.7 | 1 |
| La1.3 | 7 |
| lineage4 | 1 |
| lineage4.8 | 10 |
| lineage1.2.2.2 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1.2.1 | 8 |
| La1.8.1 | 4 |
| lineage4.1.1.3 | 8 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.3 | 6 |
| lineage1.1.3.1 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1.1 | 3 |
| lineage4.9.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| La1.7.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La2 | 1 |
| lineage2.2.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage1.1.2 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.2.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 338 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR228175 | Sensitive | lineage3 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1202451 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR1208969 | Sensitive | lineage4.9 | None | SRR1208575 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR1208917 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1202702 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR10305656 | Other | lineage2.2.1 | None | SRR1182880 | Other | lineage4.9 | None | SRR1208477 | Sensitive | lineage4.9 | None | SRR1208824 | Other | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR1208553 | Other | lineage4.9 | None | SRR1202735 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1202555 | Sensitive | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1202489 | Other | lineage4.9 | None | SRR1208526 | Sensitive | lineage4.9 | None | SRR1208682 | Other | lineage4.9 | None | SRR1202740 | Other | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SRR1181214 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1208325 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR1202613 | Other | lineage4.9 | None | SRR1208837 | Sensitive | lineage4.9 | None | SRR2101423 | Sensitive | lineage4.3.2.1 | None | ERR4769552 | Sensitive | La1.3 | None | SRR1710088 | Sensitive | lineage2.2.1 | cn | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1208750 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR1208195 | Sensitive | lineage4.9 | None | SRR1208990 | Sensitive | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR1202583 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR1208880 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1208452 | Sensitive | lineage4.9 | None | SRR1208444 | Sensitive | lineage4.9 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR1208284 | Sensitive | lineage4.9 | None | SRR1208302 | Sensitive | lineage4.9 | None | SRR1209050 | Other | lineage4.9 | None | SRR1208645 | Sensitive | lineage4.9 | None | SRR12199400 | Sensitive | lineage4.9 | None | SRR1209038 | Sensitive | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | SRR1208536 | Other | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1202404 | Other | lineage4.9 | None | SRR1208604 | Sensitive | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1208872 | Sensitive | lineage4.9 | None | SRR1208488 | Sensitive | lineage4.9 | None | SRR1202503 | Sensitive | lineage4.9 | None | SRR1208533 | Sensitive | lineage4.9 | None | SRR1208539 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR1208797 | Sensitive | lineage4.9 | None | SRR1202627 | Other | lineage4.9 | None | SRR1183520 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1208891 | Other | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1202562 | Sensitive | lineage4.9 | None | SRR1208462 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1202383 | Sensitive | lineage4.9 | None | SRR1208424 | Other | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR1208552 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR1815538 | Other | La1.7.1 | None | SRR1202721 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1202733 | Sensitive | lineage4.9 | None | SRR1209021 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1202589 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1202442 | Sensitive | lineage4.9 | None | SRR1202406 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR1208236 | Other | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR1208675 | Sensitive | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1208946 | Other | lineage4.9 | None | SRR1202380 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1202680 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1208756 | Other | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | SRR1180250 | Other | lineage4.9 | None | SRR1208587 | Sensitive | lineage4.9 | None | SRR1208525 | Sensitive | lineage4.9 | None | SRR1208563 | Sensitive | lineage4.9 | None | SRR1208290 | Sensitive | lineage4.9 | None | SRR1208233 | Other | lineage4.9 | None | SRR1208999 | Sensitive | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR1208332 | Other | lineage4.9 | None | SRR1208925 | Other | lineage4.9 | None | SRR1202628 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR1173719 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1208222 | Sensitive | lineage4.9 | None | SRR1208648 | Sensitive | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208836 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1202425 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1208958 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR12708392 | Other | lineage2.2.1 | None | SRR1208486 | Other | lineage4.9 | None | SRR1208956 | Sensitive | lineage4.9 | None | SRR1202378 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1208611 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1208456 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1208476 | Other | lineage4.9 | None | SRR1202708 | Other | lineage4.9 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR1202417 | Other | lineage4.9 | None | SRR1208765 | Sensitive | lineage4.9 | None | SRR1208174 | Other | lineage4.9 | None | SRR1209020 | Sensitive | lineage4.9 | None | SRR1208467 | Sensitive | lineage4.9 | None | SRR1208826 | Sensitive | lineage4.9 | None | SRR1208297 | Other | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR1202689 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1183212 | Other | lineage4.9 | None | SRR1208405 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | SRR1208463 | Sensitive | lineage4.9 | None | SRR2100532 | Sensitive | lineage3 | None | SRR1208804 | Sensitive | lineage4.9 | None | SRR1208249 | Sensitive | lineage4.9 | None | SRR1208710 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR11465581 | MDR-TB | lineage4.4.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1208670 | Sensitive | lineage4.9 | None | SRR1202430 | Sensitive | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | SRR1208301 | Sensitive | lineage4.9 | None | SRR1208792 | Other | lineage4.9 | None | SRR1208643 | Sensitive | lineage4.9 | None | SRR1208788 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4817840 | Other | lineage3.1.2.2 | gb | SRR7070153 | Sensitive | lineage4.1.2.1 | None | SRR1208588 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR1202610 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1208978 | Sensitive | lineage4.9 | None | SRR1208861 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR1208769 | Sensitive | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1208173 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1209014 | Sensitive | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1208398 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1208433 | Sensitive | lineage4.9 | None | SRR6045574 | Sensitive | lineage1.1.2 | gb | SRR1180420 | Sensitive | lineage4.9 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR9786076 | Other | lineage3 | None | SRR1208277 | Other | lineage4.9 | None | ERR3468613 | Other | La1.8.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR13180204 | Other | lineage3 | None | ERR2815536 | Other | La1.7.X-unk4 | None | SRR1208431 | Sensitive | lineage4.9 | None | SRR1202431 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR1202728 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1208464 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1208447 | Sensitive | lineage4.9 | None | SRR1208534 | Sensitive | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR1209022 | Other | lineage4.9 | None | SRR1208562 | Other | lineage4.9 | None | ERR228180 | Sensitive | lineage3 | None | SRR1208694 | Sensitive | lineage4.9 | None | SRR1208338 | Sensitive | lineage4.9 | None | SRR1202570 | Sensitive | lineage4.9 | None | ERR9117747 | Sensitive | lineage4.8 | None | ERR502523 | Other | lineage6.3.1 | None | SRR1202538 | Sensitive | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1208441 | Sensitive | lineage4.9 | None | SRR1202706 | Other | lineage4.9 | None | SRR1208498 | Sensitive | lineage4.9 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1202405 | Sensitive | lineage4.9 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | SRR1208886 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR5864272 | MDR-TB | lineage2.2.1 | None | ERR4769408 | Other | La1.3 | None | ERR3797067 | Other | La1.8.1 | None | SRR1202414 | Sensitive | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR1208689 | Sensitive | lineage4.9 | None | SRR1208892 | Sensitive | lineage4.9 | None | SRR1202434 | Sensitive | lineage4.9 | None | SRR1208721 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | SRR1208755 | Sensitive | lineage4.9 | None | SRR1208432 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1209019 | Sensitive | lineage4.9 | None | SRR1202656 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1238559 | Other | lineage4.9 | None | ERR3077969 | Other | La1.3 | None | SRR1202384 | Other | lineage4.9 | None | SRR1208758 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR2100537 | Sensitive | lineage3 | None | SRR1208774 | Sensitive | lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR1208196 | Sensitive | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None |
|---|
