EBG00000313325 - n.413A>G
Drug resistance types
9 Sensitive
22 RR-TB
7 HR-TB
22 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
130 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 14 |
| lineage2.2.2 | 4 |
| lineage4.4.1.1 | 8 |
| lineage4.1.2.1 | 17 |
| lineage4.3.3 | 10 |
| lineage4.8 | 15 |
| lineage5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 22 |
| lineage1.2.2 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.2.2.2 | 4 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3 | 3 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage4.1 | 2 |
| lineage4.9 | 18 |
| lineage4.1.3 | 1 |
| lineage4 | 2 |
| lineage4.3.2 | 2 |
| 2 | |
| lineage6.2.3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8.1 | 3 |
| lineage6.3.1 | 1 |
| lineage3.1.2.1 | 4 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.1 | 4 |
| lineage4.8.2 | 1 |
| lineage3;lineage4 | 2 |
| lineage3.1.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.2.1 | 3 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage3;lineage4.9 | 3 |
| lineage4.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.6.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 199 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815613 | Other | lineage3 | None | ERR4815901 | Other | lineage2.2.2 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR4816227 | Other | lineage3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR10796624 | Other | lineage4.8 | None | ERR4816967 | Other | lineage5 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4816667 | Other | lineage2.2.2 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | ERR4818988 | Other | lineage1.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4819217 | Other | La1.3;lineage1.2.2.2 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR4814312 | Other | lineage4 | None | ERR10796592 | Other | lineage4.9 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4816493 | Other | lineage4.1.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816690 | Other | None | ERR10796630 | Other | lineage6.2.3 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR10796634 | Other | lineage4.7 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR10796559 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4814356 | Other | lineage3.1.2 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6046020 | Other | lineage3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4814671 | Other | lineage3 | gb | ERR867572 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4818691 | Other | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR2515032 | Other | lineage3 | None | SRR26937099 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | Other | lineage2.2.1;lineage4 | None | ERR10796577 | Other | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR2514565 | Sensitive | lineage3.1.2.1 | gb | ERR4814775 | Other | lineage1.1.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4820151 | Other | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | DRR184607 | MDR-TB | lineage2.2.1 | vn | ERR4817134 | HR-TB | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR10796573 | Other | lineage4.8 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815467 | Other | lineage3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4816183 | Other | lineage3;lineage4.9 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR26937153 | RR-TB | lineage2.2.1 | None | ERR4817060 | Other | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4821007 | Other | lineage1.2.2.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4815811 | Other | lineage4.2.1.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4820324 | Other | lineage4 | None | ERR4821409 | Other | lineage4.8 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6046815 | Other | lineage3 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR6045957 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4820266 | Sensitive | lineage3 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR4821198 | Other | lineage3 | gb | ERR867567 | RR-TB | lineage3 | None |
|---|
