EBG00000313325 - n.828_837delTTTCCTTCCTinsGGCCACCCG
Drug resistance types
16 Sensitive
6 RR-TB
1 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3 | 3 |
| lineage4.9 | 17 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage2.2.1 | 6 |
| lineage4.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3806588 | Other | lineage6.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR5818437 | RR-TB | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR5818408 | Other | lineage4.9 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5818426 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5818469 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR5818394 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR5818410 | Sensitive | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None |
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