EBG00000313325 - n.1318C>A
Drug resistance types
23 Sensitive
18 RR-TB
7 HR-TB
21 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
121 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 25 |
| lineage2.2.1 | 28 |
| lineage4.4.1.1 | 6 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 22 |
| lineage4.1.1.1 | 5 |
| lineage4.5 | 4 |
| lineage1.2.2 | 2 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage3.1.2.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage2.2.2 | 2 |
| lineage3 | 16 |
| lineage1.2.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2 | 4 |
| lineage4.2.2.2 | 2 |
| lineage4.3.3 | 12 |
| lineage3;lineage4.9 | 2 |
| lineage4.9 | 12 |
| lineage1.1.1.1 | 2 |
| lineage3.1.1 | 5 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.2 | 3 |
| lineage4 | 2 |
| lineage4.3 | 2 |
| lineage4.7 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.8.1 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.6.5 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1.4 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1 | 1 |
| 1 | |
| lineage4.1.3 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4822150 | Other | lineage4.8 | gb | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4817194 | Sensitive | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR7069319 | Other | lineage4.5 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818988 | Other | lineage1.2.2 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4818507 | Other | lineage4.1.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR6046291 | Other | lineage3 | None | ERR10796635 | Other | lineage4.8 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7070458 | Sensitive | lineage3 | None | SRR6045778 | Other | lineage3.1 | None | ERR4815118 | Other | lineage2.2.2 | None | ERR4821286 | Other | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4820151 | Other | lineage4.8 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4818104 | Sensitive | lineage4.1.2 | gb | SRR5818572 | Sensitive | lineage4.2.2.2 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | SRR7069347 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4818180 | Other | lineage4.8 | gb | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4819017 | Other | lineage3 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR2513619 | Sensitive | lineage4.8 | gb | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2514949 | Sensitive | lineage3 | gb | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4814508 | Sensitive | lineage1.1.1.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR4821796 | Other | lineage4.1.1.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | ERR10796580 | Other | lineage4 | None | ERR10796593 | Other | lineage4.3 | None | ERR4815467 | Other | lineage3 | None | ERR4817189 | Other | lineage4.7 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4814623 | Sensitive | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4820256 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | SRR18003023 | Other | lineage2.2.1 | None | SRR5007170 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR10796565 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR2515055 | Sensitive | lineage3 | None | ERR4816907 | Other | lineage1.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | ERR4814745 | Other | lineage4.6.5 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4817555 | Sensitive | lineage3 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4815572 | Other | lineage4.1.2.1 | None | ERR2514834 | Sensitive | lineage4.7 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR2514645 | Sensitive | lineage4.3.4.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4829337 | Sensitive | lineage4.8 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4822105 | Other | lineage4.1.4 | None | ERR502517 | Other | lineage5.1.1 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR3675527 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | SRR6046541 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR4816464 | Other | lineage3 | None | ERR4819166 | Other | lineage3 | gb | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817060 | Other | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4820746 | Other | lineage3 | None | ERR4820787 | Other | lineage3.1.1 | gb | SRR7069179 | Sensitive | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4819593 | Sensitive | lineage4.5 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4817874 | Other | lineage3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4818548 | Other | lineage4.3.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR18213721 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR4816692 | Other | lineage4.1.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR4815425 | Other | lineage4.5 | gb | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4817464 | Sensitive | lineage3.1.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None |
|---|
