EBG00000313339 - n.2550T>C


Drug resistance types
13 Sensitive 37 RR-TB 12 HR-TB 14 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 162 Other
lineage Counts
lineage Count
lineage3 26
lineage1.1.2 5
lineage4.3.1.1 3
lineage4.9 36
lineage4.6.5 2
lineage2.2.1 35
lineage5.1.1 1
lineage2.2.1.1 1
lineage4.8 18
lineage4.3.3 15
lineage4.1.2 3
lineage4.1.2.1 25
lineage4.3.4 1
lineage4.6.2.2 7
lineage4.3.4.2.1 3
lineage4.3 1
lineage1.2.2.2 4
lineage2.2.2 2
lineage1.2.2 1
lineage4.4.2 2
lineage4 6
lineage4.1.3 1
lineage4.1 3
lineage4.3.4.2 3
lineage5 1
lineage3.1.3 1
8
lineage3.1.1 3
lineage4.7 1
lineage1.1.3.1 4
lineage1.1.1 1
lineage1 2
lineage3.1.2.1 1
lineage4.3.2 3
lineage4.4.1.1 7
lineage4.1.1.3.1 2
lineage4.8.2 2
lineage4.3.4.1 1
lineage3.1.2 1
lineage4.5 1
lineage6.1.3 1
lineage4.3.2.1 1
lineage4.1.1 1
lineage4.1.1.3 1
lineage4.2.1 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 249
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046815 Other lineage3 None
SRR6046534 Other lineage1.1.2 None
SRR6046616 Other lineage4.3.1.1 None
ERR2851359 Other lineage4.9 None
SRR6046737 Other lineage4.9 None
SRR6046852 MDR-TB lineage3 None
SRR6046848 Other lineage4.6.5 None
ERR4815784 Other lineage2.2.1 gb
ERR4819166 Other lineage3 gb
ERR502517 MDR-TB lineage5.1.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
ERR4819324 Other lineage4.8 gb
ERR10796563 Other lineage4.3.3 None
ERR10796626 Other lineage4.1.2 None
ERR10796565 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796564 Other lineage4.3.3 None
ERR4820736 Sensitive lineage4.1.2.1 gb
ERR10796576 RR-TB lineage4.9 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796636 Other lineage4.1.2.1 None
ERR4821318 HR-TB lineage4.6.2.2 gb
ERR2513082 Other lineage4.1.2.1 gb
ERR5864044 Pre-XDR-TB lineage2.2.1 None
ERR2514351 Sensitive lineage3 gb
ERR9117812 Other lineage4.3.1.1 None
ERR9117711 Other lineage4.3.4.2.1 None
ERR9117763 HR-TB lineage3 None
ERR9117760 HR-TB lineage4.3 None
ERR9117788 Other lineage3 None
ERR9117827 Other lineage1.2.2.2 None
SRR15276982 Pre-XDR-TB lineage3 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR1172282 Other lineage4.9 None
SRR18002896 Pre-XDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002976 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
ERR4815171 HR-TB lineage1.1.2 None
SRR18003042 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
ERR4815104 Other lineage4.8 None
ERR4815165 Other lineage4.1.2.1 None
ERR4815268 Other lineage4.8 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4815301 Other lineage4.4.2 None
ERR4814362 Other lineage4.8 None
ERR4814312 Other lineage4 None
ERR4814623 Other lineage4.8 None
ERR4815777 Other lineage4.9 None
ERR4814584 Sensitive lineage4.4.2 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4814681 Other lineage2.2.1 None
ERR4815452 Other lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
ERR4814714 Other lineage3 None
ERR4815467 Other lineage3 None
ERR1665404 Pre-XDR-TB lineage2.2.1 None
SRR3675230 RR-TB lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4815517 Other lineage1.2.2.2 None
ERR4814841 Other lineage4.1 None
ERR4814763 Other lineage2.2.1 None
ERR4815502 Other lineage4.1 None
ERR4814952 Sensitive lineage3 None
ERR4814911 Other lineage4.3.3 None
ERR4814986 Other lineage4.3.4.2 None
ERR4815005 Other lineage4.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4816954 Other lineage4.1.2.1 None
ERR4815956 Other lineage1.1.2 None
ERR4815898 Other lineage3 None
ERR4815910 Other lineage4.1.2.1 None
ERR4815919 Other lineage4.8 None
ERR4816967 RR-TB lineage5 None
ERR2027291 Sensitive lineage3.1.3 None
ERR4816087 Other lineage4.1.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816183 Other None
ERR4816232 Other lineage4 None
ERR4816243 Sensitive lineage3 None
ERR4817070 Other lineage1.1.2 None
ERR4817055 Other lineage4.1.2.1 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816270 Other lineage4.1.2.1 None
ERR4817131 Pre-XDR-TB None
ERR4816464 Other lineage3 None
ERR4816510 Other lineage4.1.2.1 None
ERR4816493 Other lineage4.1.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816531 Other lineage4.1.2 None
ERR2229233 Sensitive lineage4 None
ERR4816549 Other lineage2.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR4817134 HR-TB lineage2.2.1 None
ERR2229234 RR-TB lineage4.8 None
ERR4817189 Other lineage4.7 None
ERR4817175 Other lineage4.8 None
ERR4816692 Other lineage4.1.2.1 None
ERR4816690 Other None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816696 Other lineage3 None
ERR4817435 Other lineage1.1.3.1 None
ERR4816856 Other lineage4.1.2.1 None
SRR5818426 Other None
ERR4816804 Other lineage4.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4818691 Other lineage4.8 None
ERR4817294 Other lineage4.1.2 None
ERR4817665 Other lineage4.8 None
ERR4818655 Other lineage4.3.3 None
ERR4816907 Other lineage1.1.1 None
ERR4818685 Other lineage4.6.2.2 None
ERR4818988 Other lineage1 None
ERR4816425 Other lineage2.2.2 None
ERR4819007 Other lineage2.2.1 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4819017 RR-TB lineage3 None
ERR4818752 Other lineage3 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4818064 Other lineage4.8 None
ERR4819087 Other lineage4.3.3 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818126 RR-TB lineage1 None
ERR4818407 Other lineage4.3.2 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR2513231 RR-TB lineage4.3.4.2 None
ERR4818190 Other lineage4.8 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4818548 Other lineage4.3.3 None
ERR4818570 Other lineage4.3.3 None
ERR4818449 Other lineage4.3.3 None
ERR4818556 Other lineage3 None
SRR5007168 RR-TB lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007170 RR-TB lineage4.9 None
ERR4819133 Other lineage1.2.2.2 None
ERR4819096 Other lineage4.4.1.1 None
ERR4819192 Other lineage3 None
ERR4819217 Other lineage1.2.2.2 None
ERR4819191 Other lineage4.6.2.2 None
ERR4819198 Other lineage2.2.1 None
ERR4820720 Other lineage4.1.2.1 None
ERR4820256 Other lineage2.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR2513830 RR-TB lineage4.8 None
ERR4819491 Other lineage4.1.2.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4820324 Other lineage4 None
ERR4819533 Other lineage1.1.2 None
ERR4819528 RR-TB lineage3 None
ERR4820369 Other lineage2.2.1 None
ERR2514261 Other lineage3 None
ERR4820746 RR-TB lineage3 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819636 Other lineage3.1.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819567 Other lineage2.2.1 None
ERR4820404 Other lineage4.3.2 None
ERR4819593 Other lineage4.5 None
ERR4819615 Other lineage4.3.4.2.1 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819766 Other lineage4.4.1.1 None
ERR2515032 Other lineage3 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819982 RR-TB lineage2.2.1 None
ERR2514968 Other lineage4.3.3 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820833 HR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR4820107 RR-TB None
ERR4820161 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
ERR4821775 Other lineage4 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045496 Other lineage6.1.3 None
ERR4821286 Other lineage4.8 None
ERR4821214 RR-TB None
SRR6045553 RR-TB lineage4.9 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821360 Other lineage4.1.2.1 None
ERR4821981 Other lineage4.1.2.1 None
ERR4822043 Other lineage4.1.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821417 Other lineage1.1.3.1 None
ERR4821584 Other lineage4.8.2 None
ERR4822114 Other lineage4.1.2.1 None
ERR4821526 Other lineage4.3.2 None
ERR4822261 RR-TB lineage2.2.1 None
SRR5818397 Other lineage4.9 None
ERR4821679 Other lineage4.3.3 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR5818395 Sensitive lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
ERR4821712 HR-TB None
SRR6045664 Other lineage4.2.1 None
SRR5818391 Other lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818434 Sensitive lineage4.9 None
SRR6045705 Other lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818466 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045726 Other lineage3 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045957 Other lineage4.9 None
SRR6044958 Other lineage4.4.1.1 None
SRR6046208 Other lineage4 None
SRR6046343 Other lineage2.2.1 None