EBG00000313339 - n.1096_1097delACinsG
Drug resistance types
8 Sensitive
11 RR-TB
2 HR-TB
17 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.8 | 13 |
| lineage3 | 1 |
| lineage4.1.1.1 | 4 |
| lineage2.2.1 | 10 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| 1 | |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9 | 7 |
| lineage4.5 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.3 | 9 |
| lineage4.1.2.1 | 3 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.2 | 1 |
| lineage4 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3.1.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR4817060 | Other | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR10796560 | Other | lineage4.9 | None | ERR2514173 | Other | lineage4.5 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | SRR22424765 | HR-TB | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR2514943 | Sensitive | lineage4.8 | gb | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4816758 | Other | lineage4.8 | gb | SRR16156188 | Sensitive | lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796580 | Other | lineage4 | None | SRR7069319 | Other | lineage4.5 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4820318 | Other | lineage4.2.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002927 | XDR-TB | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR1173385 | Sensitive | lineage4.9 | None |
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