EBG00000313339 - n.977T>G
Drug resistance types
8 Sensitive
31 RR-TB
9 HR-TB
8 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
113 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 14 |
| lineage4.3.3 | 5 |
| lineage4.6 | 1 |
| lineage4 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 3 |
| lineage4.3 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.2.2 | 5 |
| lineage2.2.1 | 25 |
| La2 | 1 |
| lineage4.8 | 10 |
| lineage4.2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 24 |
| lineage1.1.2 | 4 |
| lineage1.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.3 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage4.7 | 4 |
| lineage3.1.1 | 4 |
| lineage3 | 12 |
| lineage1.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.3.4.2 | 2 |
| lineage2.2 | 1 |
| 3 | |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.9;lineage4.8 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR3797060 | Other | La1.8.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR9117678 | Other | lineage4.6.2.2 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR10315513 | Sensitive | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR15316059 | Sensitive | lineage2.2.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081770 | Other | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4814341 | Other | lineage4.7 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4814415 | Other | lineage3.1.1 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4814843 | Other | lineage1.1.3 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816120 | MDR-TB | lineage4.1.3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816231 | Other | lineage4 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4816417 | Other | lineage4.9 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816696 | Other | lineage3 | None | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4816756 | RR-TB | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR2513378 | Other | lineage3 | None | ERR4818988 | Other | lineage1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4817993 | Other | lineage1.2.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818355 | Other | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818930 | Other | lineage4.1.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR3275415 | Sensitive | lineage2.2.1 | nl | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007196 | HR-TB | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819183 | Other | lineage3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819655 | Other | lineage4.8 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4819955 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820193 | Other | lineage3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821209 | Sensitive | lineage4.1.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4822035 | Other | lineage4.8 | None | ERR2446366 | Sensitive | lineage2.2.1 | nl | ERR4822173 | Other | lineage4.7 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4822105 | Other | lineage4.1 | None | ERR4821595 | Other | lineage4.1.1.3 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822232 | Other | lineage4.3.4.2 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045726 | Other | lineage3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | ERR2517174 | Sensitive | lineage2.2.1 | nl | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046050 | Other | lineage4.3.3 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4829903 | Sensitive | lineage4.7 | it | SRR6046641 | Other | lineage4.8 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046739 | Other | lineage1.1.2 | None |
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