EBG00000313339 - n.540C>T
Drug resistance types
62 Sensitive
84 RR-TB
51 HR-TB
40 MDR-TB
35 Pre-XDR-TB
0 XDR-TB
487 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 64 |
| lineage4.1.2.1 | 79 |
| lineage4.6.2.2 | 12 |
| lineage4.6 | 6 |
| lineage3.1.1 | 9 |
| lineage1.2.2.2 | 8 |
| lineage3 | 79 |
| lineage4.3.2 | 6 |
| lineage4.3.1.1 | 7 |
| lineage1.1.1 | 5 |
| lineage2.2.1 | 94 |
| lineage4.4.1.1 | 18 |
| lineage2.2 | 7 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.2 | 7 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.1.2 | 13 |
| lineage4.2.2.2 | 5 |
| lineage4.8.1 | 1 |
| lineage4.6.1 | 2 |
| lineage4.3.3 | 27 |
| La1.4 | 1 |
| lineage2.2.1.1 | 8 |
| lineage4.2.2 | 2 |
| lineage4.4.2 | 4 |
| lineage4.1.1.3 | 10 |
| lineage4.3.4.2 | 8 |
| lineage4.8 | 77 |
| lineage4.4.1.2 | 1 |
| lineage1.2.1.2 | 1 |
| 15 | |
| lineage1.1.2 | 19 |
| lineage1.1.3.2 | 2 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4 | 26 |
| La1.6 | 2 |
| lineage4.7 | 7 |
| lineage3.1.2 | 6 |
| lineage4.1 | 5 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 6 |
| lineage4.5 | 4 |
| lineage3.1 | 2 |
| lineage4.1.3 | 3 |
| lineage4.1.1 | 5 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage3.1.2.1 | 6 |
| lineage4.3.4.1 | 11 |
| lineage4.2.1.1 | 2 |
| lineage5 | 2 |
| lineage4.2.1 | 5 |
| lineage1.1.3.3 | 4 |
| lineage3.1.3 | 3 |
| lineage1.1.3 | 2 |
| lineage1.2.1.1 | 2 |
| La1.8.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.1.1.3.1 | 6 |
| lineage4.8.2 | 2 |
| lineage1 | 2 |
| lineage6 | 2 |
| lineage4.3.2.1 | 2 |
| lineage1.2.1.2.1 | 5 |
| lineage3.1.2.2 | 4 |
| lineage2.2.1.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.2.2.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.3;lineage1.1.3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.4 | 1 |
| lineage5.1.1 | 1 |
| La1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 759 |
Geographic prevalence
Country level data for this variant is available for 134 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6197030 | Other | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117788 | Other | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117823 | Other | lineage1.1.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18213726 | Other | lineage3 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18912064 | Sensitive | lineage4.3.2 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22048377 | Sensitive | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22048352 | Sensitive | lineage4.2.2.2 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR176771 | Sensitive | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4815118 | Other | lineage2.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815184 | Other | lineage4.8 | gb | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4815204 | Other | lineage2.2.1.1 | gb | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815613 | Other | lineage3 | None | ERR4814300 | HR-TB | lineage4.4.1.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4814329 | Other | lineage4.1.2.1 | None | ERR4814312 | Other | lineage4 | None | ERR4814355 | Other | La1.6 | gb | ERR4814341 | Other | lineage4.7 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814362 | Other | lineage4.8 | None | ERR4814416 | HR-TB | lineage1.1.2 | gb | ERR4814472 | Other | lineage4.1 | None | ERR4814415 | Other | lineage3.1.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4815684 | Other | lineage5.1.4 | gb | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815425 | Other | lineage4.5 | gb | ERR4815698 | RR-TB | lineage4.7 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4815452 | Other | lineage4.3.3 | None | ERR4814637 | Other | lineage4.1.3 | gb | SAMN02567676 | MDR-TB | lineage4.6.1 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4814681 | Other | lineage2.2.1 | None | ERR4814714 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815467 | Other | lineage3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814742 | Sensitive | lineage2.2.1 | gb | ERR4814748 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815787 | Other | lineage2.2.1 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4815499 | Other | lineage4.3.4.2 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675265 | Other | lineage4 | None | ERR4815729 | Other | lineage4.1.2.1 | None | ERR4815534 | Other | lineage4 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4814951 | Pre-XDR-TB | lineage3.1.2 | gb | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR176718 | Sensitive | lineage2.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815584 | Other | lineage4.3.4.2.1 | gb | ERR4817308 | Other | lineage4.3.4.1 | None | ERR4815101 | Other | lineage3 | gb | ERR4816944 | RR-TB | lineage2.2 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4817313 | HR-TB | lineage4.2.1.1 | None | ERR4816951 | HR-TB | lineage4.1.2.1 | gb | ERR2229541 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | ERR4817309 | Other | lineage4.5 | gb | SRR3675509 | Other | lineage4.9 | None | ERR4815901 | Other | lineage2.2 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | ERR4815910 | Other | lineage4.1.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815919 | Other | lineage4.8 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4817464 | Other | lineage3.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815920 | Other | lineage3 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4815956 | Other | lineage1.1.2 | None | ERR4815949 | Sensitive | lineage2.2.1 | gb | SRR3675513 | Other | lineage4.8 | None | ERR4816008 | Other | lineage1.1.3.3 | gb | ERR4816988 | Other | lineage3 | gb | ERR4816001 | Other | lineage3 | None | ERR4816982 | Other | lineage4 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2027220 | Other | lineage3.1.3 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4816015 | HR-TB | lineage4.4.1.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816089 | Other | lineage4.2.2.2 | gb | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816186 | Sensitive | lineage3 | gb | ERR4816191 | Other | lineage3.1.2 | gb | ERR2027277 | Other | lineage4.8 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816183 | Other | None | ERR4816232 | Other | lineage4 | None | ERR4817060 | RR-TB | None | ERR4817478 | Other | lineage3 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816373 | Other | lineage4.1.2 | gb | ERR2229147 | Other | lineage4.8 | None | SRR3675565 | Other | lineage3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4817475 | Other | lineage4.1.1.3 | gb | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816464 | Other | lineage3 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4817392 | Other | lineage4.1.2.1 | gb | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4816511 | Other | lineage3 | gb | ERR2229204 | Other | lineage4.8 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR2229249 | Sensitive | lineage4.8 | dk | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816571 | Other | lineage1.1.2 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816627 | Other | lineage2.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816665 | HR-TB | lineage4.4.1.1 | gb | ERR2229366 | Other | lineage4.8 | None | ERR4816696 | Other | lineage3 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816691 | Other | lineage4.1.2.1 | gb | ERR4816699 | Other | lineage4.6 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229436 | Other | lineage4.8 | None | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR6280215 | Sensitive | lineage2.2.1 | cn | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | RR-TB | None | ERR4817426 | Other | lineage4.1 | gb | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816818 | Other | lineage4.8.2 | None | ERR4817434 | Other | lineage3 | None | ERR2228813 | Other | lineage4.8 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4817293 | Sensitive | lineage4.1.2 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2228890 | Other | lineage4 | None | ERR4816883 | Other | lineage4.5 | None | ERR4817452 | Other | lineage4.8 | None | ERR4817290 | Other | lineage3 | gb | ERR2228838 | RR-TB | lineage4.8 | None | ERR4817704 | Sensitive | lineage4.9 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817688 | Other | lineage4.3.4.2 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4817708 | Sensitive | lineage4.8 | None | ERR4817780 | Other | lineage4.7 | None | ERR4817710 | Other | lineage1.1.2 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4816425 | Other | lineage2.2.2 | None | ERR4817822 | Other | lineage4.6 | None | ERR4818698 | HR-TB | lineage2.2.1 | gb | ERR4817874 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817828 | Other | lineage4.2.2.2 | gb | ERR2513018 | Other | lineage3 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818718 | Other | lineage4.8 | gb | ERR2510749 | Sensitive | lineage4.1.2.1 | it | ERR4818714 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4817917 | Other | lineage2.2.1 | None | ERR4817926 | HR-TB | lineage4.6.2.2 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR2510764 | Pre-XDR-TB | lineage4.8 | it | ERR4818752 | Other | lineage3 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4818000 | Other | lineage3.1.1 | gb | ERR4818763 | Other | lineage3 | gb | ERR4818013 | Other | lineage4.3.3 | gb | ERR4818776 | Other | lineage2.2.1 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR4818064 | Other | lineage4.8 | None | ERR2513430 | Other | lineage4.1.2.1 | gb | ERR4818787 | MDR-TB | lineage6 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2513167 | Sensitive | lineage4.8 | gb | ERR2512443 | Other | lineage4.8 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818219 | Other | lineage4.3.2.1 | gb | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818831 | Other | lineage3 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818237 | Other | lineage4.3.3 | None | ERR4818853 | Other | lineage4.1.2 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818274 | Other | lineage4 | None | ERR4818296 | Other | lineage4.2.2 | None | ERR4818313 | Other | lineage2.2.1 | None | ERR4818912 | Other | lineage4.8 | gb | ERR4818355 | Other | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR4818370 | Other | lineage4.1.1 | None | ERR4818538 | Other | lineage3 | gb | ERR4818925 | Other | lineage1.2.1.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818436 | Other | lineage4.8 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818930 | Other | lineage4.1.2.1 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818565 | Other | lineage4.8 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818952 | Other | lineage3 | None | ERR4819087 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | SRR5007168 | RR-TB | lineage4.9 | None | ERR2512846 | Sensitive | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4817579 | Other | lineage2.2.1 | gb | ERR4817584 | MDR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4817634 | Other | lineage3.1.2.1 | None | ERR4819082 | Other | lineage1.1.2 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819125 | Other | lineage2.2.1 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4819131 | Other | lineage4 | None | SRR5152914 | MDR-TB | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819142 | Other | lineage4.7 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820717 | Other | lineage1.1.3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819192 | Other | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820713 | HR-TB | lineage4.8 | None | ERR4819224 | Other | lineage1.2.1.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819287 | Other | lineage1.1.3.3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819307 | RR-TB | lineage4 | None | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819379 | Sensitive | lineage4.1.2.1 | gb | ERR4820729 | Other | lineage2.2.1 | None | ERR4819348 | Sensitive | lineage4.1.2.1 | gb | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820324 | Other | lineage4 | None | ERR4819404 | Other | lineage4.1.2.1 | gb | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820328 | Other | lineage3 | gb | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4819456 | Other | lineage4.8 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4820350 | Other | lineage4.8 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514267 | MDR-TB | lineage2.2.1.2 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819525 | Other | lineage3 | None | ERR2514301 | Sensitive | lineage2.2.1 | gb | ERR4820748 | Other | lineage3 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4819597 | Other | lineage2.2.1.1 | None | ERR4820397 | Other | lineage4.9 | None | ERR4819550 | Other | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819613 | Sensitive | lineage4.3.1.1 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4820769 | Other | lineage4.8 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4820778 | Other | lineage4.1.2 | gb | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR2514514 | RR-TB | lineage3 | gb | ERR2515848 | Sensitive | lineage2.2.1 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819770 | Other | lineage4.8 | gb | ERR4819790 | Other | lineage4.6 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR4819834 | Other | lineage4.8 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR4819868 | MDR-TB | lineage4.2.2.1 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820604 | Other | lineage4.1.1.3 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR2514949 | Sensitive | lineage3 | gb | ERR4820820 | Other | lineage1.2.1.1 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR4820026 | Other | lineage3 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR4820161 | Other | lineage3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820116 | Sensitive | lineage2.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | ERR4820193 | Other | lineage3 | None | ERR4820909 | HR-TB | lineage4.3.4.1 | gb | ERR4820188 | Other | lineage3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821775 | Other | lineage4 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | SRR6045432 | Other | lineage3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821812 | Other | lineage4.8 | gb | ERR4821051 | Other | lineage1.2.1.2.1 | None | SRR6046087 | Other | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821011 | Other | lineage6 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR2652952 | HR-TB | lineage4.8 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821865 | Other | lineage2.2.1 | gb | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821879 | Other | lineage4.6.1.1 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4821159 | MDR-TB | lineage4.2.2.1 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821198 | Other | lineage3 | gb | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821232 | HR-TB | lineage4.8 | gb | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821295 | Other | lineage2.2.1 | gb | ERR4821310 | Other | lineage5 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821325 | Other | lineage3 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821373 | HR-TB | lineage4.1.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4822021 | Other | lineage4.8 | gb | ERR4822044 | Other | lineage3 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4821466 | Sensitive | lineage4.6 | gb | ERR4822085 | Other | lineage4.8 | gb | ERR4822104 | RR-TB | lineage3 | None | ERR4821432 | HR-TB | lineage4.1.3;lineage1.1.3.1 | None | ERR4821530 | HR-TB | lineage4.3.4.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821519 | Other | lineage3 | gb | ERR4822189 | Other | lineage4.8 | None | ERR4821610 | Other | lineage4.3.2 | None | ERR4822200 | Other | lineage4.3.4.1 | gb | ERR4821572 | Other | lineage2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822280 | Other | lineage4.1.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | ERR4821712 | HR-TB | None | SRR6045600 | Other | lineage3.1.2 | gb | ERR4821773 | Other | La1.6 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6046210 | Other | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818404 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044904 | Other | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6044993 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045952 | HR-TB | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045976 | Sensitive | lineage4.9 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045102 | Sensitive | lineage4.6.2.2 | gb | SRR6045986 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045178 | Other | lineage3 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046208 | Other | lineage4 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | SRR6045243 | Sensitive | lineage4.1.1 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6045289 | Other | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | SRR6045379 | Other | None | SRR6045358 | Sensitive | lineage4.9 | None | SRR6045365 | Other | lineage3 | gb | SRR6046275 | Other | lineage3.1.1 | None | SRR6046064 | Other | lineage3 | gb | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046291 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | SRR6046384 | Other | lineage4.3.1.1 | gb | SRR6046343 | Other | lineage2.2.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR6046482 | HR-TB | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046497 | Other | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046761 | Other | lineage3 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046729 | Other | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046848 | Other | lineage4.6.5 | None | SRR6046815 | Other | lineage3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046864 | Other | lineage3 | gb | ERR502482 | Sensitive | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6964650 | Sensitive | lineage3 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6855708 | Sensitive | lineage2.2.1 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7851312 | Other | La1.2 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8600232 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR017781 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR019855 | Other | lineage3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796627 | Other | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None |
|---|
