Rv0668 - c.-399G>C


Drug resistance types
43 Sensitive 57 RR-TB 18 HR-TB 27 MDR-TB 17 Pre-XDR-TB 0 XDR-TB 90 Other
lineage Counts
lineage Count
La1.4 1
lineage2.2.1 26
lineage4.9 83
8
lineage4.4 1
lineage2.2.2 5
lineage4.8 23
lineage3 16
lineage4.1.1.3 4
lineage1.2.1.2 1
lineage4 16
lineage3.1.2 1
lineage4.9;lineage3.1.1 1
lineage4.1.2.1 5
lineage1.2.1.1 1
lineage3.1 1
lineage4.2.2.2 1
lineage1.1.2 4
lineage4.5 1
lineage4.4.1.1 5
lineage4.1.1.3.1 3
lineage4;lineage3 1
lineage4.8.2 1
lineage1.2.1.2.1 1
lineage3.1.1 5
lineage4.3.4.2.1 1
lineage4.1.1 2
lineage4.2.1 3
lineage1.2.2.2 1
lineage4.3.1.1 1
lineage3.1.2.2 1
lineage4.3.3 4
lineage4.7 2
lineage4.4.2 1
lineage4.8.1 1
La1.2 2
lineage4.3.4.1 1
lineage4.3.4 1
lineage6.2.3;lineage1.1.2 1
La1.3 1
lineage4.9;La1.3 2
lineage3.1.3 1
lineage4.3 1
lineage2.2 3
lineage2.2.1.1 1
lineage4.9;lineage2.2.1 2
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2 1
La2 1
spoligotype Counts
spoligotype Count
None 252
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16278274 Other La1.4 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR1735596 RR-TB lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002976 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003049 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SAMEA3501065 RR-TB lineage4.8 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR20969475 Other lineage1.2.1.2 None
SRR19303820 RR-TB lineage4.8 None
SRR20632814 Sensitive lineage4 None
SRR22424765 MDR-TB lineage4 None
ERR4814690 Sensitive lineage2.2.1 None
ERR4815310 Other None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4814976 Other lineage4.9 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4815550 Other lineage4 None
SRR3675509 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR2228965 Other lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
SAMEA3501015 Other lineage4.8 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR2229198 MDR-TB lineage4.8 None
SRR3675552 RR-TB lineage4.9 None
ERR2229147 Other lineage4.8 None
ERR4816470 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816688 Other lineage4.2.2.2 gb
ERR2228838 RR-TB lineage4.8 None
ERR2228810 RR-TB lineage4 None
ERR4816756 RR-TB None
ERR2228815 RR-TB lineage4.8 None
ERR4817301 Other lineage4.9 None
ERR2228899 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR4818261 Other lineage1.1.2 None
ERR4815816 Other lineage4.5 gb
ERR2228900 RR-TB lineage4.8 None
ERR2228910 Other lineage4.8 None
ERR2229810 Other lineage4.8 None
ERR4819073 Other lineage4.1.2.1 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4818039 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR2513259 Other lineage3 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5007170 RR-TB lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4820324 Other lineage4 None
SAMEA3501067 RR-TB lineage4.8 None
ERR2513830 RR-TB lineage4.8 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2514181 Other lineage1.2.1.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
SAMN02598978 HR-TB lineage1.1.2 None
ERR4821796 Other lineage4.1.1 None
SAMEA3501070 RR-TB lineage4.8 None
ERR4820833 HR-TB None
ERR4819910 Other lineage4.9 None
ERR4821214 RR-TB None
ERR4821811 RR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR6045450 Other lineage4.9 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4821143 RR-TB lineage4.9 None
SRR6045516 Other lineage3.1.1 None
SRR6046117 RR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4822104 RR-TB lineage3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045832 HR-TB lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR5818672 Other lineage1.2.2.2 None
SRR6045928 Other lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044936 Other lineage4 None
SRR6045957 Other lineage4.9 None
SRR6046020 Other lineage3 None
SRR6044983 Other lineage3.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6045399 Other None
SRR6045424 Other lineage1.1.2 None
SRR6046385 Other lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
ERR2851356 Sensitive lineage4.9 None
SRR6397815 Other lineage4.4.1.1 None
SRR6046815 Other lineage3 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR6896545 Other lineage4.9 None
SRR6982246 Sensitive lineage4 None
SRR7645899 RR-TB lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6832644 Other lineage4.3.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645927 Other lineage4.8 None
SRR7645906 Other lineage2.2.1 None
SRR7755657 Other lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7645936 Sensitive lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
ERR323068 Sensitive lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR7851312 Other La1.2 None
ERR019855 Other lineage3 None
ERR017781 Other lineage3 None
ERR037234 Sensitive lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796559 Other lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1063855 Other lineage4 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796564 Other lineage4.3.3 None
ERR10796576 RR-TB lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR10796628 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283008 Other lineage4.9 None
ERR10796627 Other lineage4 None
ERR4596910 Sensitive lineage4 None
ERR3283043 Other lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439265 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769419 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769472 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796577 MDR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9117788 Other lineage3 None
ERR9117826 Other lineage3.1.3 None
ERR9117760 HR-TB lineage4.3 None
ERR9285979 RR-TB lineage3.1.1 None
SRR1013527 RR-TB lineage2.2 None
ERR987707 MDR-TB lineage4.7 None
SRR1013609 HR-TB lineage4 None
SRR1013530 HR-TB lineage4.9 None
SRR1013528 Pre-XDR-TB lineage2.2 None
SRR1013531 MDR-TB lineage4.9 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR1013610 HR-TB lineage4 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR10315579 Other lineage2.2.1.1 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062868 HR-TB lineage4.9 None
SRR1062865 HR-TB lineage2.2.2 None
SRR1106670 Other lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1141261 MDR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1173310 MDR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1172987 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173421 RR-TB lineage4.9 None
SRR1173566 Other lineage1.1.2 None
SRR1173833 Other lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1175506 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR13888750 Other La2 None
SRR1184021 Sensitive lineage4.9 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR15315797 RR-TB lineage2.2.1 None