EBG00000313339 - n.1052G>A


Drug resistance types
54 Sensitive 23 RR-TB 9 HR-TB 20 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 141 Other
lineage Counts
lineage Count
lineage4.6.2.2 2
lineage4.8 13
lineage4.1.1.3 6
lineage4.1.2.1 20
lineage4.9;lineage1.1 1
lineage4.3.3 8
lineage2.2.1 20
lineage4.8.1 2
lineage2.2.1.1 2
lineage4 10
lineage4.3.2 2
lineage4.9 55
lineage4.3.4.1 3
lineage4.3 1
lineage4.1.2 2
lineage4.1.1 4
lineage4.3.4 2
5
La1.8.1 1
lineage4.2.2.2 5
lineage5.1.4 1
lineage4.6 3
lineage3.1.1 5
lineage3 21
lineage4.3.1.1 5
lineage1.2.2.2 2
lineage4.4.1.1 12
lineage4.3.2.1 2
lineage4.8.2 1
lineage4.4.1.1.1 2
lineage4.6.3 1
lineage2.2.2 1
lineage4.9;lineage2.2 1
lineage2.2 1
lineage2 1
lineage6 1
lineage4.4.1.2 2
lineage1.1.2 4
lineage4.7 4
lineage3.1.2 4
lineage1.2.1.1 1
lineage4;lineage3 1
lineage4.1.1.3.1 2
lineage4.3.4.2.1 1
lineage1.2.2 1
lineage6.1.3 1
lineage3.1.3 1
lineage4.2.1 3
lineage3.1 1
lineage4.2 1
lineage1.1.3.3 1
lineage3.1.2.2 1
lineage1.2.1.2.1 1
spoligotype Counts
spoligotype Count
None 254
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7131004 Other lineage4.6.2.2 None
SRR7131123 Other lineage4.8 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131030 Other lineage4.1.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
SRR7131121 Other lineage4.3.3 None
SRR9971032 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR9971222 RR-TB lineage2.2.1.1 None
SRR7131174 Other lineage4 None
SRR9971088 RR-TB lineage2.2.1 None
SRR9971144 RR-TB lineage2.2.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796558 Sensitive lineage4 None
ERR10796557 Other lineage4 None
ERR10796575 RR-TB lineage4.9 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796577 RR-TB lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796583 Other lineage2.2.1 None
ERR10796589 Other lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796586 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796594 Other lineage4.9 None
ERR10796626 Other lineage4.1.2 None
ERR10796615 Other lineage4 None
ERR10796599 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796631 Other lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR4796577 MDR-TB None
ERR10796640 Other lineage4.1.2.1 None
ERR4188013 Other La1.8.1 None
ERR3957933 Sensitive lineage4.1.1.3 None
ERR6197034 Other lineage4.9 None
ERR6197022 Other lineage4.9 None
ERR6197038 HR-TB lineage4.9 None
ERR6197036 Other lineage4 None
ERR9117676 Other lineage4.2.2.2 None
ERR751296 Sensitive lineage5.1.4 gh
ERR6197040 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR9117704 Other lineage4.6 None
ERR9117740 Other lineage3.1.1 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117763 HR-TB lineage3 None
ERR9117806 Other lineage4.8 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR9117822 Sensitive lineage4.1.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR1180300 Sensitive lineage4.9 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349135 XDR-TB lineage4.3.3 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1175304 MDR-TB lineage4.3.3 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180252 Other lineage4.9 None
ERR9117841 Other lineage4.8.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR11342679 Other lineage4.6.3 None
SRR11349153 RR-TB lineage4.1.1 None
SRR11349159 MDR-TB lineage2.2.2 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1175487 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR1735591 Other lineage4.1.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002908 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18213721 Other lineage4.8 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18337398 Sensitive lineage4.4.1.1 None
SRR18912070 Sensitive lineage4.8 None
SRR19304094 Other lineage6 None
SRR18913750 Other lineage2.2.1 None
SRR19303808 Sensitive lineage4.1.2.1 None
SRR19303985 Other lineage4.8 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304109 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22048377 Sensitive lineage4.8 None
SRR22048392 Other lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR3675496 Other lineage4.1.1.3 gb
SRR22048374 Sensitive lineage4.8 None
SRR24035891 Sensitive lineage4.1.2.1 None
SRR3675474 Other lineage4.1.1 None
SRR3675491 Other lineage4.7 None
ERR2027250 Other lineage3.1.2 None
SRR3675234 Other None
SRR3675256 Other lineage4.7 None
SRR3675261 Other lineage1.2.1.1 None
SRR3675291 Sensitive lineage4.6 gb
SRR3675230 RR-TB lineage3 None
SRR1735628 Sensitive lineage4.1.2.1 gb
ERR2027255 HR-TB lineage4.4.1.1 None
SRR3675552 RR-TB lineage4.9 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007165 MDR-TB lineage3 None
SRR5007170 RR-TB lineage4.9 None
SRR5007178 Pre-XDR-TB lineage4.1.1.3.1 None
SRR5007183 MDR-TB lineage4.3.4.1 None
SRR5007186 Other lineage4.6 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2027230 Other lineage4.2.2.2 None
ERR3276170 Other lineage4.1.2.1 nl
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR2513913 Sensitive lineage3 gb
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820801 Other lineage1.2.2 None
SRR6045422 Other lineage4.3.1.1 None
SRR6045432 Other lineage3 gb
SRR6045445 Other lineage4.3.1.1 None
SRR6046089 Other lineage4.1.2.1 None
SRR6045496 Other lineage6.1.3 None
SRR6045485 Other lineage4.9 None
SRR6045526 HR-TB None
SRR6045565 Other lineage4.6.2.2 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR6045614 Other lineage4.8 None
SRR6046135 Other lineage4.1.2.1 None
SRR6045618 Other lineage3.1.2 None
SRR6045616 Other lineage4.4.1.2 gb
SRR6045664 Other lineage4.2.1 None
SRR6045705 Other lineage4.9 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR6045743 Other lineage3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045749 Other lineage4.1.1 gb
SRR6045778 Other lineage3.1 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR5818667 Sensitive lineage4.4.1.1 dj
SRR5818672 Other lineage1.2.2.2 None
SRR6045894 Other lineage4.8 None
ERR2851359 Other lineage4.9 None
SRR6044817 Other lineage3 None
SRR6044993 Other lineage3 None
SRR6046173 Other lineage3 None
SRR6045158 Other lineage4.9 None
SRR6045248 Other lineage3.1.1 None
SRR6045289 Other None
SRR6045295 Other lineage4.7 None
SRR6045376 HR-TB lineage4.1.2.1 gb
SRR6046064 Other lineage3 gb
SRR6045424 Other lineage1.1.2 None
SRR6046291 Other lineage3 None
SRR6044784 MDR-TB lineage3 None
SRR6044857 Other lineage4.8.1 gb
SRR6045925 Other lineage4.2 None
SRR6045957 Other lineage4.9 None
SRR6044945 HR-TB lineage4.1.2.1 gb
SRR6044958 Other lineage4.4.1.1 None
SRR6045056 Other lineage2.2.1 gb
SRR6045989 Other lineage2.2.1 gb
SRR6045159 Other lineage3.1.1 None
SRR6046177 Other lineage3.1.2 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046246 Other lineage3 None
SRR6046273 Other lineage3.1.2 None
SRR6046442 Other lineage3 None
SRR6046457 Other lineage3 gb
SRR6046447 Sensitive lineage4.8 gb
SRR6046463 Other lineage4.4.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046508 Sensitive lineage3.1.2.2 gb
SRR6046616 Other lineage4.3.1.1 None
SRR6046607 Other lineage3 None
SRR6046641 Other lineage4.8 None
SRR6046646 Other lineage4.7 gb
SRR6046729 Other None
SRR6046655 Other lineage4.1.2.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046766 Other lineage3.1.1 None
SRR6046737 Other lineage4.9 None
SRR6046739 Other lineage1.1.2 None
SRR6046818 Other lineage4.2.1 gb
SRR6046852 MDR-TB lineage3 None
SRR6153150 Other lineage3.1.1 None
SRR6046905 Other lineage3 gb
SRR6367397 Other lineage4.1.2.1 None
SRR6153166 Other lineage1.2.1.2.1 ca
SRR6398010 Sensitive lineage4.2.1 ca
SRR6046679 Other lineage3 gb