EBG00000313339 - n.1052G>A
Drug resistance types
45 Sensitive
14 RR-TB
5 HR-TB
21 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
73 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 14 |
| lineage4.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.1 | 23 |
| lineage4.2.2.2 | 3 |
| lineage4.9 | 39 |
| lineage4.1.2.1 | 7 |
| lineage2.2.2 | 3 |
| 1 | |
| lineage4.8.1 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8 | 8 |
| lineage4.4.1.1.1 | 3 |
| lineage4.5 | 1 |
| lineage4.3.3 | 6 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.1 | 3 |
| lineage4.7 | 3 |
| lineage4.1.2 | 3 |
| lineage3.1.2.1 | 3 |
| lineage6.1.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage1.1.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.1.1.3 | 3 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage5.1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070461 | Other | lineage3 | None | ERR10796593 | Other | lineage4.3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7070548 | Other | lineage4.1.2.1 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | ERR4796577 | HR-TB | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR7069319 | Other | lineage4.5 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR7070553 | Other | lineage3 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR10796634 | Other | lineage4.7 | None | SRR7070479 | Other | lineage4.1.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR18213736 | Other | lineage3 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR1175513 | Sensitive | lineage4.9 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046064 | Other | lineage3 | gb | ERR10796577 | Other | lineage4.9 | None | SRR7070458 | Sensitive | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR7069518 | Other | lineage4.8 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR18913750 | Other | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR5007165 | Other | lineage3 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR6046729 | Other | lineage3 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR7068875 | Other | lineage3.1.2.2 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR3675552 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1181349 | Sensitive | lineage4 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR9971222 | RR-TB | lineage2.2.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR7069797 | Sensitive | lineage3 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR7069999 | Sensitive | lineage5.1.3 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR2513913 | Sensitive | lineage3 | gb | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675491 | Other | lineage4.7 | None | ERR10796589 | Other | lineage4.9 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR7070181 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR3675256 | Other | lineage4.7 | None | ERR10796596 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR18213726 | Other | lineage3 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR19304109 | Sensitive | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None |
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