EBG00000313339 - n.2058G>C


Drug resistance types
28 Sensitive 51 RR-TB 18 HR-TB 31 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 209 Other
lineage Counts
lineage Count
lineage4.4.1.1 9
La1.8.1 1
lineage4.9 37
lineage4.6.2.2 11
lineage4.1.2.1 35
lineage1.2.2.2 4
lineage3 39
lineage4.3.2 4
lineage4.2.2.2 6
lineage4.8 13
lineage3.1.1 8
lineage4.3 2
lineage3.1.3 1
lineage1.1.2 9
lineage4.8.2 2
lineage4.4.1.1.1 2
lineage2.2.1 39
lineage2.2.1.1 4
lineage4.1.2 4
lineage4.3.4.1 6
lineage4.1.1 6
lineage4.3.3 17
lineage4.3.2.1 4
lineage4.8.1 2
lineage2.2.2 2
lineage4.9;lineage3.1.1 1
lineage4.2.2 2
lineage4.5 5
lineage4.1.1.3 6
lineage4.4.2 2
lineage4.4.1.2 1
lineage6 2
lineage3.1.2 4
lineage4.6 4
lineage4.4.1 1
lineage1.2.1.1 2
lineage4.6.5 2
lineage1.1.3 1
lineage4 9
lineage5 1
lineage4.3.4.2 1
lineage3.1 2
5
lineage4.7 2
lineage1.1.1 1
lineage1 2
lineage3.1.2.1 1
lineage4.1.1.3.1 3
lineage4;lineage3 1
lineage6.3.1 1
lineage4.3.4.2.1 2
lineage4.1 1
lineage1.1.3.1 3
lineage4.3.1.1 5
lineage6.1.3 1
lineage4.1.3 2
La1.6 1
lineage4.2.1 1
lineage3.1.2.2 2
lineage1.1.3.3 1
lineage4.3.1 1
lineage1.2.1.2.1 1
lineage4.9;lineage1.1 1
lineage4.3.4 2
spoligotype Counts
spoligotype Count
None 353
Geographic prevalence
Country level data for this variant is available for 44 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9896153 RR-TB lineage4.4.1.1 None
ERR4586795 Other La1.8.1 None
ERR6197030 Other lineage4.9 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117763 HR-TB lineage3 None
ERR9117805 Other lineage4.3.2 None
ERR9117827 Other lineage1.2.2.2 None
ERR6197024 RR-TB lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117675 Other lineage4.8 None
ERR9117740 Other lineage3.1.1 None
ERR9117760 HR-TB lineage4.3 None
ERR9117781 Other lineage3.1.3 None
ERR9117788 Other lineage3 None
ERR9117818 Sensitive lineage1.1.2 None
ERR9117841 Other lineage4.8.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR10851715 Sensitive lineage4.3.4.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342690 Sensitive lineage4.1.2.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349153 RR-TB lineage4.1.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349166 Pre-XDR-TB lineage4.3.3 None
SRR11349178 MDR-TB lineage4.4.1.1.1 None
SRR1181250 Other lineage4.9 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1175304 MDR-TB lineage4.3.3 None
SRR1181161 Other lineage4.9 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR1180252 Other lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR1183080 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002896 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002899 RR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003038 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18911555 Other lineage4.1.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR19303820 RR-TB lineage4.8 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR19325559 Sensitive lineage4.3.2 None
ERR4815281 Other lineage4.4.2 None
ERR4815777 Other lineage4.9 None
SRR18002954 Other lineage2.2.1 None
SRR18002961 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR19241806 Sensitive lineage4.1.2.1 None
SRR19303815 Other lineage4.8 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304094 Other lineage6 None
SRR19304115 Other lineage4.1.2.1 None
SRR19317568 Sensitive lineage4.5 None
SRR21658553 Sensitive lineage4.3.3 None
SRR22048536 Other lineage4.3.3 None
SRR3675474 Other lineage4.1.1 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR4815669 HR-TB lineage1.2.2.2 None
SRR3675227 Other lineage4.9 None
SRR3675291 Sensitive lineage4.6 gb
SRR3675230 RR-TB lineage3 None
ERR4815488 HR-TB lineage4.4.1 None
SRR3675261 Other lineage1.2.1.1 None
ERR4814951 Pre-XDR-TB lineage3.1.2 gb
ERR4814745 Other lineage4.6.5 None
ERR4815572 Other lineage4.1.2.1 None
SRR3675454 Other lineage3 gb
ERR4816610 RR-TB lineage4.3.3 None
ERR4815077 Other lineage2.2.1.1 gb
ERR4815921 Other lineage4.3.3 gb
ERR4815944 HR-TB lineage4.1.2.1 None
SRR3675527 RR-TB lineage4.9 None
ERR4816093 Other lineage1.1.3 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2027304 Sensitive lineage4.1.2.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816231 Other lineage4 None
SRR3675565 Other lineage3 None
ERR4816373 Other lineage4.1.2 gb
SRR3675509 Other lineage4.9 None
ERR4815870 HR-TB lineage4.6.2.2 gb
SRR3675511 Sensitive lineage4.6 None
ERR4816967 RR-TB lineage5 None
ERR4816988 Other lineage3 gb
ERR4816009 Other lineage1.1.2 None
ERR2027232 Other lineage4.3.4.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4817349 Other lineage4.9 None
ERR4817060 RR-TB None
ERR4817903 Other lineage4.1.2.1 gb
ERR4818671 Other lineage4.8 gb
ERR2512986 Other lineage3 None
ERR4817189 Other lineage4.7 None
ERR4816882 Other lineage4.8 None
ERR4816883 Other lineage4.5 None
ERR4817306 Other lineage3 gb
ERR4817703 Other lineage1.1.1 None
ERR4817709 HR-TB lineage4.6.2.2 gb
ERR4818655 Other lineage4.3.3 None
ERR4818988 Other lineage1 None
ERR4817826 RR-TB lineage4.5 None
ERR2513413 Other lineage3.1.2.1 None
ERR2513082 Other lineage4.1.2.1 gb
SAMN02585982 MDR-TB lineage4.3.3 None
ERR4818797 Other lineage4.5 None
ERR4818126 RR-TB lineage1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR4818407 Other lineage4.3.2 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818570 Other lineage4.3.3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007165 MDR-TB lineage3 None
ERR2513296 Other lineage4.1.2.1 gb
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007170 RR-TB lineage4.9 None
SRR5007186 Other lineage4.6 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4818897 Other lineage4.1.2.1 gb
ERR4818393 RR-TB lineage3 None
ERR4818440 Other lineage6.3.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4819166 Other lineage3 gb
ERR4819140 Other lineage4.1.2.1 None
ERR4819622 Other lineage4.1.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819324 Other lineage4.8 gb
ERR4819329 Sensitive lineage4.6.2.2 None
ERR2514261 Other lineage3 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4819423 Other lineage4.6.2.2 None
ERR4820742 Other lineage4.3.4.2.1 None
ERR4819491 Other lineage4.1.2.1 None
ERR4820746 RR-TB lineage3 None
ERR4819533 Other lineage1.1.2 None
ERR4820397 Other lineage4.9 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4820777 Other lineage4.1.2.1 None
ERR2514514 RR-TB lineage3 gb
ERR2514692 Other None
ERR4819765 Other lineage4.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR2514619 Sensitive lineage3.1.1 gb
SRR6045422 Other lineage4.3.1.1 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4820829 Other lineage4.8 None
ERR4820833 HR-TB None
ERR4820075 Other lineage4.1.2.1 None
ERR2514926 Other lineage4.6.2.2 gb
ERR4820846 RR-TB lineage4.6.2.2 gb
SRR6045424 Other lineage1.1.2 None
ERR4820922 Other lineage4.1.2.1 gb
ERR4820959 Other lineage4.1.2.1 None
ERR4820968 Other lineage4.1.2.1 gb
ERR4821054 Other lineage3 None
SRR6045447 Other lineage3 gb
SRR6045445 Other lineage4.3.1.1 None
SRR6045458 Sensitive lineage4.1.2.1 gb
SRR6045464 Other lineage4.1.1.3 None
ERR4821848 Other lineage2.2.1 None
SRR6045485 Other lineage4.9 None
SRR6045496 Other lineage6.1.3 None
SRR6045516 Other lineage3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045565 Other lineage4.6.2.2 None
SRR6046117 RR-TB lineage4.9 None
ERR4821263 Other lineage4.1.3 gb
ERR4821981 Other lineage4.1.2.1 None
ERR4821325 Other lineage3 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821417 Other lineage1.1.3.1 None
ERR4822104 RR-TB lineage3 None
ERR4822114 Other lineage4.1.2.1 None
ERR4821563 HR-TB lineage1.1.2 gb
ERR4821773 Other La1.6 None
SRR6045553 RR-TB lineage4.9 None
SRR6045599 Other lineage4.8 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR6045683 Other lineage3.1.2 None
SRR6045705 Other lineage4.9 None
SRR6045743 Other lineage3 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR6045749 Other lineage4.1.1 gb
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045778 Other lineage3.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR5818612 Other lineage4.2.2.2 None
SRR5818660 Sensitive lineage4.1.1.3 dj
SRR5818672 Other lineage1.2.2.2 None
SRR6044983 Other lineage3.1.1 None
SRR6045859 Other lineage3 None
SRR6044784 MDR-TB lineage3 None
SRR6044817 Other lineage3 None
SRR6044841 Other lineage4.9 None
SRR6044857 Other lineage4.8.1 gb
SRR6044904 Other lineage3 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044936 Other lineage4 None
SRR6045064 Other lineage4.3.1.1 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045056 Other lineage2.2.1 gb
SRR6045159 Other lineage3.1.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6046159 Other lineage4.8.2 None
SRR6045986 Other lineage3 None
SRR6045110 Other lineage3 None
SRR6045125 Other lineage1.1.2 None
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045248 Other lineage3.1.1 None
SRR6045267 RR-TB lineage4 None
SRR6045321 Other lineage1.1.3.1 None
SRR6045335 Other lineage4.1.2.1 None
SRR6045376 HR-TB lineage4.1.2.1 gb
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR6046246 Other lineage3 None
SRR6046273 Other lineage3.1.2 None
SRR6046291 Other lineage3 None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
ERR2851359 Other lineage4.9 None
ERR4829039 RR-TB lineage4.3.1 None
ERR4829208 RR-TB lineage4.8 None
ERR4829835 HR-TB lineage4.8 it
SRR6046440 Other lineage3.1.2.2 None
SRR6046447 Sensitive lineage4.8 gb
SRR6046457 Other lineage3 gb
SRR6046463 Other lineage4.4.1.1 None
SRR6153150 Other lineage3.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046634 Other lineage3 gb
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046679 Other lineage3 gb
SRR6046737 Other lineage4.9 None
SRR6046739 Other lineage1.1.2 None
SRR6046766 Other lineage3.1.1 None
SRR6046852 MDR-TB lineage3 None
SRR6046905 Other lineage3 gb
SRR6046534 Other lineage1.1.2 None
SRR6046729 Other None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6153166 Other lineage1.2.1.2.1 ca
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
SRR6398013 Other lineage4.1.2 ca
ERR2886463 Sensitive lineage2.2.1 None
SRR9971229 RR-TB lineage4.3.2.1 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131030 Other lineage4.1.2.1 None
SRR7131121 Other lineage4.3.3 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR9971185 Pre-XDR-TB lineage4.3.2.1 None
SRR9971293 Sensitive lineage4.1.2 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971223 Other lineage2.2.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796558 Sensitive lineage4 None
ERR10796559 Other lineage4.9 None
ERR10796561 Other lineage4.3.2 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796573 Other lineage4.8 None
ERR10796574 Other lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796580 RR-TB lineage4.6 None
ERR10796582 HR-TB lineage4.3 None
ERR10796583 Other lineage2.2.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796599 Other lineage4 None
ERR3806588 Other lineage6 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796627 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR10796630 HR-TB None
ERR10796631 Other lineage4.3.4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796635 Other lineage4 None
ERR10796640 Other lineage4.1.2.1 None
ERR3283008 Other lineage4.9 None
ERR3283043 Other lineage4.9 None
ERR3283051 Other lineage4.9 None