Rv1630 - c.471G>C


Drug resistance types
94 Sensitive 60 RR-TB 74 HR-TB 66 MDR-TB 19 Pre-XDR-TB 1 XDR-TB 132 Other
lineage Counts
lineage Count
lineage2.2.1 51
lineage4.2.1 3
lineage4.9 127
lineage1.1.1 1
lineage3.1.1 3
lineage4.2.2.1 2
lineage4.3.3 6
73
La1.4 1
lineage4.4 1
lineage4.4.1.1 4
lineage2.2.2 3
lineage3.1.3 1
lineage3 15
lineage2.2.1.1 1
La1.7.1 1
lineage4.8 9
lineage4 47
lineage4.1 2
lineage4.2;La1.7 1
lineage4.3.4.2.1 5
lineage4.1.1.3 3
lineage4.9;lineage3.1.1 1
lineage3.1 1
lineage1.1.2 1
lineage4.1.2.1 6
lineage4.5 3
lineage4;lineage2 1
lineage3.1.2.1 2
lineage4.3 1
lineage4.6.1.2 5
lineage1 1
lineage5.1.4 1
lineage4.1.1.3.1 3
lineage4.8.2 1
lineage4.2.2 1
lineage1.2.2.2 1
lineage1.2.1.2.1 1
lineage4.3.4.2 1
lineage1.1.3.1 3
lineage4.7 5
lineage4.9;lineage4.2.1 1
lineage4.2.2.2 1
lineage4.1.4 1
lineage4.6.2.2 3
lineage5.2 2
lineage2.2 6
lineage4.4.1.1;lineage1.2.2.1 2
lineage5.1.1 2
La1.8.1 4
lineage4.6.1.1 1
lineage4.8.1 1
lineage4.4.1.2 2
lineage4.3.4.1;La1.7 1
La1.7.X-unk4 1
lineage4;lineage3.1 1
La1.3 8
lineage4.9;La1.3 3
La1 1
lineage6.1.3 1
lineage6 1
lineage4.3.2.1 1
lineage4.9;lineage2.2 1
lineage2 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 446
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12416829 MDR-TB lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16149129 MDR-TB lineage4.2.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR16156832 RR-TB None
SRR16156188 HR-TB lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156751 RR-TB lineage4.9 None
SRR16156804 RR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR16157123 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR21469201 Other La1.7.1 None
SRR19303820 RR-TB lineage4.8 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR22424765 MDR-TB lineage4 None
SRR12708416 Sensitive lineage4.1 None
SRR8692879 HR-TB lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692887 Other None
SRR23961559 Other lineage4.2;La1.7 None
SRR3675472 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675477 Other lineage4.9 None
ERR4815310 Other None
SRR3675475 Other lineage4.1.1.3 None
SRR3675222 Other None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675488 HR-TB None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3675210 Sensitive lineage4.9 None
ERR1750907 RR-TB None
ERR4815471 Other lineage4.9 None
SRR3675229 Other lineage4 None
ERR3275450 Other lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4814841 Other lineage4.1 None
ERR4814767 MDR-TB lineage2.2.1 None
SRR3675266 Sensitive lineage4.9 None
SRR3675234 Other None
SRR3675249 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675501 HR-TB None
SRR3675270 HR-TB None
SRR3675283 Sensitive lineage4.9 None
SRR3675279 Other None
ERR4815550 Other lineage4 None
ERR4815079 RR-TB lineage3 None
SRR3675318 Other lineage4.9 None
ERR4815556 RR-TB lineage3 None
SRR3675312 HR-TB lineage4 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675387 Sensitive None
SRR3675541 Sensitive lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR4816964 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675522 Other None
SRR3675537 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
ERR212001 HR-TB None
SRR3675553 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
ERR4816397 Other lineage1.1.2 None
ERR4816231 Other lineage4 None
ERR4817069 RR-TB None
ERR4816417 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
SRR3675574 HR-TB None
ERR4816464 Other lineage3 None
ERR4817127 Other lineage4.1.2.1 None
ERR212138 HR-TB lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229198 MDR-TB lineage4.8 None
ERR2229233 Sensitive lineage4 None
ERR4816656 HR-TB None
ERR4816762 Other lineage4;lineage2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4818710 Sensitive lineage4.9 None
ERR2515055 Other lineage3 None
ERR4818126 RR-TB lineage1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818536 Other lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818929 HR-TB None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR2509886 RR-TB lineage3 None
ERR2513259 Other lineage3 None
ERR4818561 HR-TB lineage4 None
ERR2512770 Other lineage4.2.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007165 MDR-TB lineage3 None
ERR2513283 Other lineage5.1.4 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR3275709 HR-TB lineage3 nl
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5007170 RR-TB lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4820318 Other lineage4.2.2 None
ERR4819217 Other lineage1.2.2.2 None
SRR5341396 Other lineage4 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4820324 Other lineage4 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR1035138 MDR-TB None
ERR4819546 HR-TB lineage3 None
ERR4820369 Other lineage2.2.1 None
SRR5341437 Sensitive lineage4.9 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR2514552 Sensitive lineage3 None
SRR5341296 Sensitive lineage4.9 None
ERR2514692 Other None
ERR4820503 Other lineage2.2.1 None
ERR2693257 Other None
ERR4819863 RR-TB lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
SRR5341323 Sensitive lineage4 None
ERR4820107 RR-TB None
SRR5341345 Sensitive lineage4.9 None
SRR6045516 Other lineage3.1.1 None
ERR4819933 Other lineage4.9 None
ERR2446382 Other lineage4 None
ERR2693231 Other None
ERR2517475 Other lineage4 None
ERR4821811 RR-TB lineage4.9 None
ERR4821119 Other lineage4.4.1.1 None
ERR2693230 Other None
ERR2693254 Other None
SRR6045526 HR-TB None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821288 Other lineage4.7 None
ERR4821172 RR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821550 Other lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6044876 Sensitive lineage4 None
SRR6045909 Other lineage4.8 None
SRR6045957 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045053 Other None
SRR6045233 HR-TB None
SRR6045191 Sensitive lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6045327 HR-TB None
SRR6046046 Other None
SRR6046225 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
SRR6046259 Sensitive lineage4.9 None
ERR4828628 MDR-TB lineage4.5 None
SRR6046397 Other None
ERR4829333 RR-TB lineage4 None
ERR323037 HR-TB lineage4 None
ERR4830353 Other None
SRR6046482 HR-TB None
ERR4828962 Sensitive lineage4.1.4 it
SRR6046644 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR4831739 MDR-TB lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831638 Sensitive None
SRR6789628 HR-TB lineage4.9 None
ERR11465711 Other lineage4.4.1.1;lineage1.2.2.1 None
SRR6982246 Sensitive lineage4 None
SRR6832644 Other lineage4.3.3 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR502517 MDR-TB lineage5.1.1 None
ERR4817047 Sensitive lineage4.2.2.1 gb
SRR7496471 Sensitive None
ERR502943 HR-TB None
ERR5087846 Other La1.8.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7496523 Other lineage4.7 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR7585435 Other lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR9971112 Other lineage2.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323108 HR-TB lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1063857 HR-TB None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034634 HR-TB None
ERR1034652 Other None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10748430 MDR-TB lineage2.2.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796569 Other lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR10796598 RR-TB lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR11465714 Other lineage4.4.1.1;lineage1.2.2.1 None
ERR10796629 Other lineage4 None
ERR3283014 HR-TB None
ERR3283006 RR-TB lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3283028 Other None
ERR3283033 Sensitive lineage4.9 None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283047 HR-TB None
ERR3283031 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3797043 HR-TB None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3468488 RR-TB La1.8.1 None
ERR3797014 Other None
ERR3797048 HR-TB None
ERR3797044 Other None
ERR3797061 Other None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797062 RR-TB lineage4.9 None
ERR3797080 HR-TB lineage4.9 None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR405209 Sensitive lineage4 None
ERR4596910 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR473334 HR-TB lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR473303 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR473367 Sensitive lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769495 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769521 HR-TB None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769554 RR-TB lineage4.9 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4796351 MDR-TB lineage4.9 None
ERR4796577 MDR-TB None
ERR2514712 Sensitive lineage4.7 gb
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798262 HR-TB La1 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR12015085 Other lineage4.8 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4811030 Sensitive None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4810624 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR6359070 Other lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4812155 Sensitive None
ERR736835 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866807 HR-TB lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR736839 Other None
ERR736848 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9119669 HR-TB None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR987707 MDR-TB lineage4.7 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9787033 Sensitive lineage6 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR1172885 HR-TB lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1172717 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173310 MDR-TB None
SRR1175500 MDR-TB lineage4 None
SRR1173740 Other None
SRR1175052 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None