EBG00000313339 - n.528G>A


Drug resistance types
119 Sensitive 11 RR-TB 65 HR-TB 27 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 195 Other
lineage Counts
lineage Count
lineage4 2
lineage4.9 308
lineage2.2.1 19
lineage4.3.4.2 2
lineage4.1.1.1 3
lineage4.3.4.2.1 4
La1.7;lineage4.9;lineage7 3
lineage6.1.3 1
lineage5.2 2
La1.7;lineage3.1;lineage4 1
La1.8.1 2
lineage1;lineage4.9 1
La3;lineage4.9 5
lineage4.2.2.2 3
lineage4.2.1 2
lineage4.3.3;lineage4.9 1
lineage4.3.3 7
La1;lineage4.9 2
lineage4.8 8
La1;lineage4.1.2 1
lineage2.2.1.1 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 2
lineage3 2
La1.7.1 1
La3;M.canetti;lineage4.9 1
lineage4.9;lineage7 3
La2;lineage4.9 1
lineage4.1.3 1
lineage1.1.2 2
lineage4.1.2.1 3
lineage4.1.2.1;lineage4.9 1
lineage4.3.2.1 1
lineage3.1.1;lineage4.9 1
lineage4.4.1.1 1
lineage6 1
La1.7;lineage4.9 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1.1.3 1
lineage4.9.1 1
lineage4.1;lineage4.9 1
lineage1.1.3.1 1
1
lineage1.2.1.1 1
lineage4.3.4 1
lineage4.4.2 2
lineage2.2.2 2
La2;lineage2.2 1
lineage2.2.1;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage5.1.1 1
lineage3.1.3 2
La1.7.1;lineage4.9 1
lineage4.4.1.2 2
lineage4.4.1.1.1 1
lineage4.8.1 1
spoligotype Counts
spoligotype Count
None 427
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675265 Other lineage4 None
SRR1183345 Sensitive lineage4.9 None
SRR1182904 Sensitive lineage4.9 None
SRR1183195 Sensitive lineage4.9 None
SRR1183683 Sensitive lineage4.9 None
SRR1183362 Other lineage4.9 None
SRR1180123 Sensitive lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
SRR1183617 Other lineage4.9 None
SRR1181542 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR1183603 Other lineage4.9 None
SRR1180729 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR1180475 Sensitive lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR1183061 Other lineage4.9 None
SRR1181190 Sensitive lineage4.9 None
SRR1180580 Other lineage4.9 None
SRR1181232 Sensitive lineage4.9 None
SRR1180563 Sensitive lineage4.9 None
SRR1183417 Sensitive lineage4.9 None
SRR1183720 Other lineage4.9 None
SRR1181579 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR10796571 Other lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1182963 Sensitive lineage4.9 None
SRR1183396 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1180657 Other lineage4.9 None
SRR1183451 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR7236177 Other La1.8.1 None
SRR1180046 Other lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1183422 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR1182900 Sensitive lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR11342688 Other lineage4.2.2.2 None
SRR1183292 Sensitive lineage4.9 None
SRR6046087 Sensitive lineage4.9 None
SRR1180643 Other lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR1180555 Other lineage4.9 None
SRR1181597 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1181487 Sensitive lineage4.9 None
SRR1183050 Other lineage4.9 None
SRR1183224 Other lineage4.9 None
ERR10796615 Other lineage4.3.3;lineage4.9 None
SRR1181281 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR1180668 Other lineage4.9 None
SRR1181143 Other lineage4.9 None
SRR1180647 Other lineage4.9 None
SRR1181489 Sensitive lineage4.9 None
SRR1180094 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR1180073 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1181200 Sensitive lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR1183599 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR1183270 Other lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR1181519 Sensitive lineage4.9 None
SRR1181233 Other lineage4.9 None
SRR1181422 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR1183339 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR1183681 Other lineage4.9 None
SRR1180105 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR1181573 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1180101 Sensitive lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR1183300 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1183458 Sensitive lineage4.9 None
SRR1182971 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR1180026 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1181386 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR10796566 Other lineage4.9 None
SRR1183705 Other lineage4.9 None
SRR5341319 Other lineage3 None
SRR1183695 Sensitive lineage4.9 None
SRR1180066 Sensitive lineage4.9 None
SRR1183294 Sensitive lineage4.9 None
SRR1183450 Other lineage4.9 None
SRR1180631 Other lineage4.9 None
SRR1181575 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
SRR22048536 Other lineage4.3.3 None
SRR1180771 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1183185 Other lineage4.9 None
SRR1183427 Sensitive lineage4.9 None
ERR10796628 Other lineage4.3.3 None
SRR1181199 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR1183069 Other lineage4.9 None
ERR926165 Other lineage4.9 None
SRR1181486 Sensitive lineage4.9 None
SRR6046117 Other lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR1183688 Sensitive lineage4.9 None
SRR1183606 Sensitive lineage4.9 None
SRR1181236 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR1183334 Other lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1180017 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1182992 Other lineage4.9 None
SRR1183677 Sensitive lineage4.9 None
SRR1181591 Sensitive lineage4.9 None
SRR1183613 Other lineage4.9 None
SRR1183227 Other lineage4.9 None
SRR1181586 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
SRR1183031 Other lineage4.9 None
SRR1183102 Sensitive lineage4.9 None
SRR1181509 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR867573 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR1183259 Sensitive lineage4.9 None
SRR1182874 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1183718 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR16156817 Other lineage4.9 None
SRR18002963 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR1181272 Sensitive lineage4.9 None
SRR1183020 Other lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR1180124 Sensitive lineage4.9 None
SRR1183188 Other lineage4.9 None
SRR1183504 Sensitive lineage4.9 None
ERR10796565 Other lineage4.9 None
SRR6982141 Other lineage4.3.3 None
ERR4815709 Sensitive lineage4.1.2.1 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
ERR926160 Other lineage4.9 None
SRR1183236 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR1180115 Other lineage4.9 None
SRR1180214 Sensitive lineage4.9 None
SRR1180083 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1183014 Sensitive lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SRR1181286 Other lineage4.9 None
ERR867572 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1180646 Sensitive lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR1183389 Sensitive lineage4.9 None
SRR1182908 Other lineage4.9 None
SRR1183223 Sensitive lineage4.9 None
SRR1181588 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR1183394 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR1183359 Other lineage4.9 None
ERR9787362 Sensitive lineage6 None
ERR10796577 Other lineage4.9 None
SRR19303907 Other lineage4.8 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1182977 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR1183461 Other lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR1180642 Sensitive lineage4.9 None
SRR1182903 Sensitive lineage4.9 None
SRR1180661 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR1181184 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1183495 Other lineage4.9 None
SRR1180031 Other lineage4.9 None
SRR1182901 Other lineage4.9 None
SRR1182916 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1180196 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR5341467 Other lineage4.9 None
SRR1180525 Other lineage4.9 None
SRR1180466 Sensitive lineage4.9 None
SRR1183412 Other lineage4.9 None
SRR18003045 Other lineage2.2.1 None
ERR037504 Other lineage4.9.1 None
SRR1180659 Sensitive lineage4.9 None
ERR867571 Other lineage4.9 None
SRR1183518 Other lineage4.9 None
SRR1183212 Other lineage4.9 None
SRR1181508 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1183485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1182955 Sensitive lineage4.9 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR1183520 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1181229 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR1181500 Sensitive lineage4.9 None
SRR1181245 Other lineage4.9 None
SRR1181359 Sensitive lineage4.9 None
SRR1180815 Other lineage4.9 None
SRR1183669 Other lineage4.9 None
SRR1180081 Other lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR245675 Sensitive lineage1.1.2 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR1183096 Sensitive lineage4.9 None
ERR10796635 Other lineage4.8 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR1180119 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1183600 Sensitive lineage4.9 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR1183438 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
SRR7131123 Other lineage4.8 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1159378 Other lineage4.9 None
SRR1181495 Sensitive lineage4.9 None
SRR1180494 Sensitive lineage4.9 None
SRR1181176 Other lineage4.9 None
SRR1181590 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR1180752 Other lineage4.9 None
SRR1180786 Sensitive lineage4.9 None
SRR1183476 Sensitive lineage4.9 None
SRR1180222 Other lineage4.9 None
SRR18002974 Other lineage2.2.1 None
SRR1183499 Other lineage4.9 None
SRR1181224 Other lineage4.9 None
SRR11342669 Other lineage4.8 None
SRR1182958 Other lineage4.9 None
SRR1180114 Other lineage4.9 None
SRR1183672 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1180128 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR5341400 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR1182924 Sensitive lineage4.9 None
SRR1183418 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR1183664 Other lineage4.9 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR1183616 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR1180103 Sensitive lineage4.9 None
SRR1180653 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR19304104 Other lineage4.8 None
ERR176778 HR-TB lineage4.9 None
SRR1183482 Other lineage4.9 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR1183021 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1183712 Other lineage4.9 None
ERR10796591 Other lineage4.9 None
SRR1183137 Other lineage4.9 None
SRR1180041 Sensitive lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR1183402 Other lineage4.9 None
SRR1183018 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR502517 Other lineage5.1.1 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR1182919 Sensitive lineage4.9 None
SRR1183442 Other lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR2027220 Sensitive lineage3.1.3 None
SRR1183708 Other lineage4.9 None
SRR1180807 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183614 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1180822 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1183475 Sensitive lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1183268 Other lineage4.9 None
SRR1180587 Sensitive lineage4.9 None
SRR1183452 Other lineage4.9 None
SRR1180014 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR1180497 Sensitive lineage4.9 None
SRR1180765 Sensitive lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR6045158 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR1180476 Sensitive lineage4.9 None
SRR1181147 Other lineage4.9 None
ERR10796598 Other lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR1180594 Sensitive lineage4.9 None
SRR1181572 Sensitive lineage4.9 None
SRR18003042 Other lineage2.2.1 None
SRR1180047 Other lineage4.9 None
SRR1183400 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1181270 Sensitive lineage4.9 None
SRR1180095 Other lineage4.9 None
SRR1182921 Other lineage4.9 None
SRR1183129 Other lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR1180456 Other lineage4.9 None
SRR1183128 Other lineage4.9 None
SRR1183619 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1181303 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
SRR1183288 Other lineage4.9 None
SRR1183432 Other lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR1183682 Other lineage4.9 None
SRR1181581 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
SRR1183385 Other lineage4.9 None
SRR1180530 Other lineage4.9 None
SRR1181358 Other lineage4.9 None
ERR137286 Other lineage4.9 None
SRR1180667 Other lineage4.9 None
SRR1180486 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR1183692 Sensitive lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR2513121 Sensitive lineage3.1.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR3797079 Sensitive lineage4.9 None