EBG00000313339 - n.528G>A


Drug resistance types
63 Sensitive 21 RR-TB 67 HR-TB 27 MDR-TB 21 Pre-XDR-TB 0 XDR-TB 139 Other
lineage Counts
lineage Count
50
lineage4.1.2.1 11
lineage4.1.1.3 3
lineage3.1.1 3
lineage4.9 28
lineage5 1
lineage4.8 16
lineage1.1.3.1 2
lineage4 72
lineage3.1.3 4
lineage2.2.1 44
lineage4.2.2.2 3
lineage4.4 1
lineage4.1.1.3.1 2
lineage4.6.2.2 2
lineage3 11
lineage3.1.2 2
lineage4.1.2 6
lineage4.7 2
lineage5.2 2
lineage3.1.2.2 1
lineage1.2.2.2 3
lineage4.6.5 1
lineage4.4.1.1 2
lineage4.6.2 1
lineage2.2.1.1 3
lineage4.6 1
lineage2.1 3
lineage4.3.3 6
lineage4.3.4.1 3
lineage5.1.1 1
La1.8.1 5
lineage4.3.2.1 2
lineage4.4.2 2
lineage4.4.1.2 2
lineage4.9.1 1
lineage4.3.4.2 2
lineage2.2 2
lineage4.9;lineage4.3.4 1
lineage4.9;lineage1.1 1
lineage4.1.1 1
lineage4.3.4 2
lineage1.1.2 4
lineage4;lineage3.1 1
lineage1.1.1 1
lineage4.3.1.1 1
lineage6.1.3 1
lineage6 1
lineage4.2.1 1
La1.7.1 1
lineage2.2.2 4
lineage4.2.2 2
lineage4;lineage2.2 1
lineage4.9;lineage3.1.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.1.3 1
lineage4.3.4.2.1 2
lineage1.2.1.1 1
lineage1 1
lineage3.1 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 338
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046087 Other None
SRR6046089 Other lineage4.1.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045516 Other lineage3.1.1 None
SRR6045553 RR-TB lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821310 Other lineage5 None
ERR4821286 Other lineage4.8 None
ERR4821417 Other lineage1.1.3.1 None
ERR4821655 Sensitive lineage4 None
SRR6046210 Other lineage4 None
SRR6045614 Other lineage4.8 None
SRR6045613 Other lineage3.1.3 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045892 Sensitive None
SRR6044787 Other lineage4.4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044876 Sensitive lineage4 None
SRR6045102 Sensitive lineage4.6.2.2 gb
SRR6045928 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045952 HR-TB None
SRR6045010 Other lineage4 None
SRR6045986 Other lineage3 None
SRR6045158 Other lineage4.9 None
SRR6046177 Other lineage3.1.2 None
SRR6045358 Sensitive lineage4.9 None
SRR6045178 Other lineage3 None
SRR6045232 Other lineage4.1.1.3 gb
SRR6045365 Other lineage3 gb
SRR6045376 HR-TB lineage4.1.2.1 gb
SRR6046259 Sensitive lineage4.9 None
SRR6045384 Other lineage4.1.2 None
SRR6046376 Other lineage3 None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046456 Other lineage4.1.1.3.1 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046848 Other lineage4.6.5 None
SRR6511621 HR-TB None
SRR6046482 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046761 Other lineage3 gb
SRR6367397 Other lineage4.1.2.1 None
SRR6650124 Sensitive lineage4.6.2 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4872193 MDR-TB lineage4.6 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6964566 Other lineage3.1.2 None
SRR6982141 RR-TB lineage4.3.3 None
ERR502510 Sensitive lineage4 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131075 Other lineage4.8 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7131121 Other lineage4.3.3 None
SRR7131123 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131216 Other lineage4.1.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323108 HR-TB lineage4 None
SRR9971122 MDR-TB lineage4.8 None
ERR323107 Other lineage4 None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR037504 Other lineage4.9.1 None
ERR323085 Sensitive lineage4 None
ERR10219876 Other lineage4.3.4.2 None
ERR067699 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1034634 HR-TB None
ERR1063857 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063896 Sensitive None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR10796568 Other lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796565 RR-TB lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796589 Other lineage4.9 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796615 Other lineage4 None
ERR10796592 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796626 Other lineage4.1.2 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796631 Other lineage4.3.4 None
ERR10796627 Other lineage4 None
ERR10796629 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR323115 Sensitive lineage4 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796635 Other lineage4 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3445503 HR-TB None
ERR3283031 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445501 HR-TB None
ERR3283040 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3797063 HR-TB None
ERR3797048 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797073 HR-TB La1.8.1 None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR4024991 Other None
ERR387051 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4188247 HR-TB None
ERR473332 Other lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4769521 HR-TB None
ERR4797193 HR-TB lineage1.1.2 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797474 Other None
ERR4798099 Other None
ERR4797505 Sensitive lineage3 in
ERR6866022 Other None
ERR4799378 Sensitive lineage4 None
ERR6358979 Other None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6197022 Other lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR736872 Sensitive lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR736848 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736856 HR-TB lineage4 None
ERR9117732 Other lineage1.2.2.2 None
ERR751326 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736875 HR-TB lineage4 None
ERR9117823 Other lineage1.1.1 None
ERR9117740 Other lineage3.1.1 None
ERR9117812 Other lineage4.3.1.1 None
ERR9787256 Other lineage6.1.3 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9117827 Other lineage1.2.2.2 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR970445 MDR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
ERR9787362 Sensitive lineage6 None
SRR10315567 Other lineage2.2.1 None
SRR1173568 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR11342683 Other lineage4.1.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR1158918 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR18002948 Other lineage2.2 None
SRR1173777 Other lineage4 None
SRR1180996 HR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002981 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003042 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR18003045 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR19303819 Other lineage4.6.2.2 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303817 Other lineage2.2.1 None
SRR19303907 Other lineage4.8 None
SRR21727760 Other lineage2.2.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR19303917 Other lineage2.2.1 None
SRR19304104 Other lineage4.8 None
SRR22048352 Sensitive lineage4.2.2.2 None
SRR8692893 Other lineage4.9 None
SRR22048536 Other lineage4.3.3 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR8692790 RR-TB lineage4 None
SRR8692897 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692905 HR-TB None
ERR176778 HR-TB None
SRR8692863 Other lineage4;lineage2.2 None
ERR4815171 HR-TB lineage1.1.2 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4815204 Other lineage2.2.1.1 gb
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814637 Other lineage4.1.3 gb
ERR176779 HR-TB None
ERR4815709 Sensitive lineage4.1.2.1 None
ERR4814748 Other lineage4.8 None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR181824 HR-TB lineage4 None
ERR176651 HR-TB None
SRR3675265 Other lineage4 None
SRR3675456 HR-TB None
ERR181887 HR-TB None
ERR2027256 Other lineage4.1.2 None
ERR2027220 Other lineage3.1.3 None
ERR4815849 Other lineage3.1.1 None
SRR3675509 Other lineage4.9 None
SRR3675513 Other lineage4.8 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027277 Other lineage4.8 None
ERR4818126 RR-TB lineage1 None
ERR2027290 RR-TB lineage3.1 None
SRR5341422 HR-TB lineage2.1 None
SRR3675555 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR4817826 RR-TB lineage4.5 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4 None
ERR212138 HR-TB lineage4 None
ERR4817189 Other lineage4.7 None
ERR4818296 Other lineage4.2.2 None
ERR245675 Sensitive lineage1.1.2 None
SRR5341298 Sensitive lineage4 None
ERR4819051 Other lineage4 None
SRR5341453 Sensitive None
SRR5007204 Other lineage4.1.2.1 None
SRR5341366 Sensitive lineage4 None
ERR4819166 Other lineage3 gb
SRR5341387 Other lineage4 None
SRR5341425 Other lineage4 None
ERR4819456 Other lineage4.8 None
ERR4820478 Other lineage3.1.3 None
ERR4819766 Other lineage4.4.1.1 None
ERR4819770 Other lineage4.8 gb
SRR5341455 Sensitive lineage4 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818570 Other lineage4.3.3 None
SRR5341373 HR-TB lineage4 None
ERR4819198 Other lineage2.2.1 None
ERR4820713 HR-TB lineage4.8 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341432 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341313 HR-TB None
SRR5341469 Other lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341319 Other lineage3 None
ERR2515032 Other lineage3 None
SRR5341315 Sensitive None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None