EBG00000313339 - n.1006C>T


Drug resistance types
23 Sensitive 44 RR-TB 15 HR-TB 47 MDR-TB 19 Pre-XDR-TB 1 XDR-TB 150 Other
lineage Counts
lineage Count
lineage4.1.2.1 18
lineage2.2.1 49
lineage4.3.3 18
lineage4.8 31
lineage4.1.1.3.1 2
lineage4.6.1.1 3
lineage2.2.2 6
lineage4.6.2.2 4
lineage4.9 35
lineage4.4.1.1 3
lineage2.2.1.1 2
lineage1.2.2 1
lineage4.7 4
lineage4.1.2.1;lineage4.9 2
lineage4.8.1 4
lineage5.1.1 1
lineage4.3.1.1 3
La1.8.1 5
lineage3 17
lineage5 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage1.1.3.1 4
lineage4.4.1.1.1 4
lineage4.1.2 2
lineage1.2.1.2.1 1
lineage4.3.2.1 2
lineage4.9.1 1
lineage1.2.2.2 2
lineage4 2
lineage4.3.4.2.1 8
lineage1.2.2.1 1
lineage4.2.1 5
3
lineage2.2.1;lineage4 1
lineage4.5 3
lineage4.1.1.1 4
lineage3.1.2.1 3
lineage4.3.2 1
La1.3 1
lineage4.3 3
lineage4.2.2 1
lineage3.1.1 4
lineage4.8.2;lineage4.9 1
lineage4.2.2.2 1
lineage4.4.1.2 1
lineage3;lineage4.9 2
lineage4.3.4.1 2
lineage1.2.1.2 1
lineage2.2.1;lineage2.2.2 1
lineage2;lineage4 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.3.4.2 1
lineage6.1.2 1
lineage4.8.2 1
lineage4.1.1.3 3
lineage2.2.1;lineage4.9 1
lineage3;lineage4 2
lineage4.1.3 3
lineage4.4 1
La3;lineage4.9 1
lineage4.3.4.1;lineage4.9 1
lineage4.6.5 1
lineage1.1.1.1 1
lineage4.1 1
lineage1.1.3.3 1
La1.6 1
lineage4.2.1.1;lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 299
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820736 Sensitive lineage4.1.2.1 gb
ERR4822261 RR-TB lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR7070320 Other lineage4.8 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR4819007 Other lineage2.2.1 None
SRR1173182 Other lineage4.6.1.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR1181256 Other lineage4.9 None
ERR502481 RR-TB lineage4.9 None
ERR2513082 Other lineage4.1.2.1 gb
ERR3797065 RR-TB lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR18002933 Other lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
SRR16156804 Sensitive lineage4.9 None
ERR10796626 Other lineage4.1.2.1 None
DRR184629 Other lineage2.2.1 None
ERR2512841 HR-TB lineage2.2.1 gb
SRR6046117 Other lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SRR19303796 Other lineage4.3.3 None
ERR2513405 Other lineage2.2.1 None
SRR6046343 Other lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR4818904 Other lineage4.8 None
ERR4819002 HR-TB lineage4.8 None
SRR18002963 Other lineage2.2.1 None
ERR978765 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
DRR184932 Other lineage2.2.1 None
ERR10796563 Other lineage4.3.3 None
ERR4818126 Other lineage1.2.2 None
SRR18002956 Other lineage2.2.1 None
ERR10796565 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR502473 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4796351 Sensitive lineage4.9 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7645899 Other lineage2.2.1 None
ERR4812763 Other lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR502517 Other lineage5.1.1 None
SRR6046616 Other lineage4.3.1.1 None
ERR5311077 Other La1.8.1 None
ERR4817189 Other lineage4.7 None
ERR10796578 Other lineage2.2.1 None
SRR6046376 Other lineage3 None
SRR7070087 Other lineage4.8.1 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR7070419 Other lineage3 None
ERR4816967 Other lineage5 None
ERR4819198 Other lineage2.2.1 None
ERR502474 RR-TB lineage4.9 None
ERR9117812 Other lineage4.3.1.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR4816464 Other lineage3 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR978766 RR-TB lineage4.8 None
SRR1173281 Other lineage3 None
SRR1173170 Other lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR4820891 Sensitive lineage4.9 gb
DRR185024 Other lineage2.2.2 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR10796597 Other lineage4.3.3 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
SRR18003042 Other lineage2.2.1 None
ERR4821679 Other lineage4.3.3 None
ERR4821214 Other lineage1.2.1.2.1 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR6045957 Other lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
SRR7069839 Other lineage4.8 None
ERR2514351 Sensitive lineage3 gb
ERR11464997 HR-TB lineage1.2.2.2 None
ERR4820324 Other lineage4 None
SRR1180446 Other lineage4.9 None
SRR18002908 Other lineage2.2.1 None
ERR867521 MDR-TB lineage2.2.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR4816856 Other lineage4.1.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR1735598 RR-TB lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
SRR12882248 Sensitive lineage1.2.2.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR4816690 Other None
ERR4817060 Other None
ERR4819166 Other lineage3 gb
ERR4815452 Other lineage4.3.3 None
SRR22048536 Other lineage4.3.3 None
SRR1181403 Other lineage4.9 None
SRR18002961 Other lineage2.2.1 None
ERR10796635 Other lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR7069319 Other lineage4.5 None
ERR4819641 Other lineage4.6.2.2 None
SRR9971372 MDR-TB lineage4.1.1.1 None
ERR10796583 Other lineage2.2.1 None
ERR3468613 Other La1.8.1 None
SRR6046208 Other lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR6866241 Other lineage4.3.2 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR1665404 Pre-XDR-TB lineage2.2.1 None
ERR4812495 Other lineage4.1.2.1 pe
ERR4769423 Other La1.3 None
ERR5908124 Other lineage4.8 None
ERR3275941 RR-TB lineage4.3 nl
ERR4820019 Other lineage4.3.4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
ERR4819772 Other lineage1.1.3.1 None
SRR11342682 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR7069800 Other lineage3.1.2.1 None
ERR2513298 Sensitive lineage4.8 gb
ERR4819864 RR-TB lineage1.1.3.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR7069193 Other lineage4.3.1.1 None
ERR4818570 Other lineage4.3.3 None
ERR4817874 Other lineage3 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4821286 Other lineage4.8 None
SRR7645906 Other lineage2.2.1 None
ERR10796596 Other lineage4.9 None
SRR1140716 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR4821704 Other lineage4.3.3 None
ERR978767 RR-TB lineage4.8 None
ERR4829337 Sensitive lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR7236330 Other La1.8.1 None
ERR4820410 RR-TB lineage3.1.1 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR4817584 Other lineage3;lineage4.9 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR4814623 Sensitive lineage4.8 None
ERR4820075 Other lineage4.1.2.1 None
SRR18003023 Other lineage2.2.1 None
ERR4819324 Other lineage4.8 gb
ERR4818691 Other lineage4.8 None
ERR4819383 RR-TB lineage4.9 None
SRR10214505 Sensitive lineage1.2.1.2 None
ERR1023509 MDR-TB lineage4.9 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1173770 Other lineage4.9 None
SRR1238558 Other lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR11342689 Other lineage4.1.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR1062918 Other lineage3 None
ERR9117760 HR-TB lineage4.3 None
ERR4819863 RR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR4817069 RR-TB None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR4820151 Other lineage4.8 None
ERR2514173 Other lineage4.5 gb
ERR11465627 Sensitive lineage4.3.4.2.1 None
SRR7755657 Other lineage4.8 None
SRR7069347 Other lineage4.1.2.1 None
SRR1180440 Other lineage4.9 None
ERR4821143 Other lineage4.9 None
SRR6046815 Other lineage3 None
SRR18002941 RR-TB lineage2.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
ERR4821325 Other lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
ERR10762318 Pre-XDR-TB lineage2.2.1 None
SRR6046839 Other lineage4.9 None
ERR11049173 Sensitive lineage4.1.2.1 None
ERR4769554 RR-TB lineage4.9 None
ERR11049213 Sensitive lineage4.1.2.1 None
ERR4820833 Other lineage3;lineage4.9 None
ERR4814362 Other lineage4.8 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR3283046 Sensitive lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR10796633 Other lineage4.3.4.2 None
ERR4821119 Other lineage4.4.1.1 None
ERR4815923 Sensitive lineage4.8 None
ERR8774355 MDR-TB lineage2.2.1 None
SRR14296220 Other La1.8.1 None
ERR867575 Other lineage4.9 None
ERR4818050 Sensitive lineage4.6.2.2 None
ERR9787033 Sensitive lineage6.1.2 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR6046852 MDR-TB lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR6045603 Other lineage4.1.1.3 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
SRR11342671 RR-TB lineage4.1.3 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR2515077 Sensitive lineage3 gb
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR7070293 Other lineage4.8 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR4816548 HR-TB lineage4.5 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR6982141 Other lineage4.3.3 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR3797063 Other La3;lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4816831 Other lineage4.1.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
ERR4820030 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
ERR10796617 Other lineage4.3.4.1 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR4814745 Other lineage4.6.5 None
SRR18002967 HR-TB lineage2.2.1 None
SRR6046064 Other lineage3 gb
ERR3468488 Other La1.8.1 None
ERR9119120 Other lineage4.8 None
ERR9285979 RR-TB lineage3.1.1 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR10796580 Other lineage4 None
ERR4814617 Other lineage1.1.3.1 None
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
ERR10796593 Other lineage4.3 None
ERR4815502 Other lineage4.1 None
SAMN02567682 Other lineage4.6.1.1 ug
ERR10796576 Sensitive lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR4821761 Other lineage3 gb
ERR4830892 Pre-XDR-TB lineage2.2.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4815780 MDR-TB lineage4.1.3 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
ERR4819948 Other lineage4.4.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None