EBG00000313339 - n.1006C>T
Drug resistance types
50 Sensitive
93 RR-TB
35 HR-TB
55 MDR-TB
32 Pre-XDR-TB
0 XDR-TB
396 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 18 |
| lineage4.3.3 | 24 |
| lineage2.2.1 | 76 |
| lineage4.8 | 62 |
| lineage4.4.1.1 | 12 |
| lineage3.1.2 | 6 |
| lineage3.1.3 | 4 |
| lineage4.1.2.1 | 75 |
| lineage4.5 | 5 |
| lineage3 | 70 |
| lineage1.1.3 | 3 |
| lineage1.1.2 | 14 |
| lineage4.3.2 | 4 |
| lineage4.3.4.2 | 5 |
| lineage1.1.3.1 | 12 |
| lineage4.2.1.1 | 1 |
| lineage4.9 | 46 |
| lineage4.1.1.3.1 | 4 |
| lineage4.8.2 | 3 |
| lineage4.6 | 5 |
| lineage4.3.4.2.1 | 10 |
| lineage1.2.1.2.1 | 4 |
| lineage4.1.2 | 7 |
| lineage1.2.2.2 | 4 |
| lineage4 | 15 |
| lineage4.3.4.1 | 6 |
| lineage3.1.2.2 | 4 |
| lineage4.2.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 8 |
| lineage4.3.1.1 | 9 |
| lineage3.1.1 | 9 |
| lineage4.9;lineage4.8 | 1 |
| lineage3.1.2.1 | 6 |
| lineage4.8.1 | 3 |
| 15 | |
| lineage4.7 | 9 |
| lineage4.1.1 | 10 |
| lineage4.2.2.2 | 6 |
| lineage4.1.1.3 | 11 |
| lineage6.1.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2.1 | 5 |
| lineage5 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.1.3 | 4 |
| lineage3.1 | 1 |
| La1.8.1 | 5 |
| lineage4.8;lineage3 | 1 |
| lineage4.9;lineage3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.3 | 2 |
| lineage2.2.1.1 | 6 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.2 | 6 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 1 |
| La1.3 | 2 |
| lineage1.1.3.3 | 2 |
| lineage1.2.1.2 | 2 |
| lineage6 | 2 |
| La1.6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.4 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.4.2 | 3 |
| lineage4.6.5 | 1 |
| lineage4.1 | 2 |
| lineage2.2 | 1 |
| lineage1.1.1 | 1 |
| lineage1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 661 |
Geographic prevalence
Country level data for this variant is available for 145 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819030 | Other | lineage4.6.2.2 | gb | ERR2512494 | Other | lineage4.3.3 | gb | ERR4818173 | Other | lineage2.2.1 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818200 | Other | lineage3.1.2 | gb | ERR2512536 | Other | lineage3.1.3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818209 | Other | lineage4.1.2.1 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818287 | Other | lineage4.5 | gb | ERR2512599 | Other | lineage3 | gb | ERR4819078 | Other | lineage4.3.3 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818351 | Other | lineage1.1.3 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818904 | Other | lineage4.8 | None | ERR2512630 | Other | lineage4.8 | gb | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818396 | Sensitive | lineage4.1.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2512698 | Other | lineage1.1.3.1 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR2513298 | Other | lineage4.8 | gb | SRR5007168 | RR-TB | lineage4.9 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817533 | Sensitive | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007186 | Other | lineage4.6 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007196 | HR-TB | lineage4.1.2.1 | None | ERR4819058 | HR-TB | lineage3 | None | ERR4817568 | Other | lineage4.1.2.1 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR2513356 | Other | lineage4.5 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR2513619 | Other | lineage4.8 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR2513743 | Other | lineage4.1.2 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4819131 | Other | lineage4 | None | ERR4819166 | Other | lineage3 | gb | ERR2513681 | Other | lineage1.1.2 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR2513762 | Sensitive | lineage3 | gb | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819269 | Sensitive | lineage3 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4820318 | Other | lineage4.2.2 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819348 | Sensitive | lineage4.1.2.1 | gb | ERR2513910 | Other | lineage3 | gb | ERR2513929 | Other | lineage4.1.1.2 | None | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR2514261 | Other | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820356 | Other | lineage1.1.3.1 | gb | ERR4819498 | Sensitive | lineage4.9 | gb | ERR4820369 | Other | lineage2.2.1 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4819550 | Other | lineage3 | None | ERR4819532 | HR-TB | lineage4.6.2.2 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819613 | Sensitive | lineage4.3.1.1 | gb | ERR2514368 | Sensitive | lineage4.8.2 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4819636 | Other | lineage3.1.2 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514409 | Sensitive | lineage3 | gb | ERR4819655 | Other | lineage4.8 | None | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514516 | Sensitive | lineage3 | gb | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR2514533 | Other | lineage4.9 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4820787 | Other | lineage3.1.1 | gb | ERR4820478 | Other | lineage3.1.3 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514609 | HR-TB | lineage3 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514668 | Other | lineage4.8.1 | gb | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819821 | Other | lineage4.8 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2514756 | Other | lineage3 | gb | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820815 | Other | lineage1.1.3 | gb | ERR1023509 | Other | None | ERR2514834 | Other | lineage4.7 | None | ERR4819955 | Other | lineage3 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR2514896 | Other | lineage3 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2515027 | Sensitive | lineage4.1.2.1 | gb | ERR2514943 | Other | lineage4.8 | gb | ERR2514949 | Sensitive | lineage3 | gb | ERR4820829 | Other | lineage4.8 | None | ERR4820030 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820833 | HR-TB | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820107 | RR-TB | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820130 | Other | lineage3 | None | ERR4820188 | Other | lineage3 | gb | ERR4820193 | Other | lineage3 | None | ERR4820690 | Other | lineage4.1.1 | gb | ERR4821028 | Sensitive | lineage3.1.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821010 | Sensitive | lineage4.2.2.2 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4820939 | Sensitive | lineage4.2.2.2 | gb | ERR4821057 | HR-TB | lineage4 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821812 | Other | lineage4.8 | gb | ERR4821069 | Other | lineage3 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821829 | Other | lineage1.1.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821093 | Other | lineage4.3.3 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | SRR6045496 | Other | lineage6.1.3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821171 | Sensitive | lineage4.3.1.1 | gb | ERR4821167 | Other | lineage4.8 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821906 | Other | lineage4.1.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821209 | Sensitive | lineage4.1.1 | None | ERR4821200 | Other | lineage4.1.1 | gb | ERR4821214 | RR-TB | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821325 | Other | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821454 | Sensitive | lineage1.1.2 | gb | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821466 | Sensitive | lineage4.6 | gb | ERR4822021 | Other | lineage4.8 | gb | ERR4821371 | Other | lineage4.8 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822173 | Other | lineage4.7 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821526 | Other | lineage4.3.2 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4821610 | Other | lineage4.3.2 | None | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | ERR4821595 | Other | lineage4.1.1.3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822232 | Other | lineage4.3.4.2 | None | ERR4822225 | Sensitive | lineage3 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822248 | Sensitive | lineage4.4.1.1 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6046152 | Other | lineage4.9 | None | SRR6046135 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR5818686 | Sensitive | lineage4.2.2.2 | dj | SRR6045778 | Other | lineage3.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045894 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045235 | Other | La1.8.1 | gb | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046208 | Other | lineage4 | None | SRR6046064 | Other | lineage3 | gb | SRR6045365 | Other | lineage3 | gb | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046239 | Other | lineage4.9;lineage3 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046376 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829835 | HR-TB | lineage4.8 | it | ERR4830493 | MDR-TB | lineage2.2.1 | None | ERR4829261 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | ERR4830529 | RR-TB | lineage2.2.1 | za | ERR4829289 | Other | lineage4.1.2.1 | None | SRR6046442 | Other | lineage3 | None | ERR4830892 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046815 | Other | lineage3 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6046729 | Other | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046864 | Other | lineage3 | gb | ERR502478 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971234 | MDR-TB | lineage4.3.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796634 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769517 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796257 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797974 | Other | lineage1.1.2 | in | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9119120 | Other | lineage4.8 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315513 | Sensitive | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349183 | RR-TB | lineage3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR12882248 | Sensitive | lineage1.2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR14296220 | Other | La1.8.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18911462 | Sensitive | lineage1.2.1.2.1 | None | SRR19303805 | Other | lineage4.8 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19304109 | Other | lineage4.8 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4815178 | Other | lineage4.8 | gb | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR11049173 | Sensitive | lineage4.1.2.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815224 | Other | lineage2.2.1 | gb | ERR4815618 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814341 | Other | lineage4.7 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815613 | Other | lineage3 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815365 | Sensitive | lineage4.8 | gb | ERR4814415 | Other | lineage3.1.1 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815680 | Other | lineage1.1.2 | gb | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4815452 | Other | lineage4.3.3 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4814623 | Other | lineage4.8 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4814681 | Other | lineage2.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675236 | HR-TB | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675234 | Other | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4814843 | Other | lineage1.1.3 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4815532 | Other | lineage3 | gb | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4816951 | HR-TB | lineage4.1.2.1 | gb | ERR4815053 | Other | lineage4.1.2.1 | gb | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4816968 | Other | lineage4.2.1 | gb | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815919 | Other | lineage4.8 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4815923 | Sensitive | lineage4.8 | None | ERR4815921 | Other | lineage4.3.3 | gb | ERR4816967 | RR-TB | lineage5 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815994 | Other | lineage3 | gb | ERR4816993 | Other | lineage4.3.4.2.1 | None | ERR4816988 | Other | lineage3 | gb | ERR2027256 | Other | lineage4.1.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816147 | RR-TB | lineage2.2.1 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816191 | Other | lineage3.1.2 | gb | ERR4816231 | Other | lineage4 | None | ERR4816232 | Other | lineage4 | None | ERR4816120 | MDR-TB | lineage4.1.3 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4817046 | Other | lineage3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816300 | Other | lineage4.1.2.1 | None | SRR3675565 | Other | lineage3 | None | ERR4817069 | RR-TB | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816562 | Other | lineage4 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR11049213 | Sensitive | lineage4.1.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817175 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816690 | Other | None | ERR4816691 | Other | lineage4.1.2.1 | gb | ERR4816696 | Other | lineage3 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816756 | RR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4817497 | Other | lineage1.1.2 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4815804 | Other | lineage4.2.1 | gb | ERR4817665 | Other | lineage4.8 | None | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4816896 | Sensitive | lineage3 | gb | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4817735 | Other | lineage4.8 | None | ERR4818663 | Other | lineage3 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR4818671 | Other | lineage4.8 | gb | ERR4817874 | Other | lineage3 | None | ERR2513378 | Other | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4817803 | Other | lineage4.2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817919 | Other | lineage4.3.4.1 | gb | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4817907 | Other | lineage3 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4818753 | Other | lineage3 | gb | ERR4817941 | Other | lineage4.8 | gb | ERR2513059 | Other | lineage4.1.1 | gb | ERR4819007 | Other | lineage2.2.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4818008 | Other | lineage4.3.3 | None | ERR4817993 | Other | lineage1.2.2.2 | None | ERR4818752 | Other | lineage3 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR2513405 | Other | lineage2.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR2512443 | Other | lineage4.8 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512416 | Sensitive | lineage3.1.3 | gb | ERR4818810 | Other | lineage2.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None |
|---|
