EBG00000313339 - n.1998T>G
Drug resistance types
0 Sensitive
15 RR-TB
8 HR-TB
30 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| lineage2.2.1 | 20 |
| lineage4.2.1 | 3 |
| lineage4.6.1.2 | 5 |
| lineage4.1.1.3 | 3 |
| lineage4.2.2.2 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3 | 3 |
| lineage4.1.2.1 | 2 |
| lineage3;lineage4 | 1 |
| lineage2.2.2 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.8 | 10 |
| lineage4.3.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
| La1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867575 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR867572 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR867571 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | SRR1181256 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR7645928 | Other | lineage4.7 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR387051 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR867567 | RR-TB | lineage3 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4769436 | Other | La1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
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