EBG00000313325 - n.55C>T
Drug resistance types
21 Sensitive
0 RR-TB
3 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1 | 2 |
| La1.2.BCG;lineage4.9 | 5 |
| La1.8.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| lineage4.8 | 5 |
| lineage4.6.1.1 | 5 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.3.3 | 2 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage6.2.3 | 1 |
| La1.7.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| lineage3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8.1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.4.1.1;lineage4.6.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1182965 | Other | lineage4.9 | None | SRR1182953 | Other | lineage4.9 | None | SRR124453 | HR-TB | lineage2.2.2 | None | SRR1180803 | Other | lineage4.9 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR8073606 | Other | La1.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1181392 | Other | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR1183621 | Other | lineage4.9 | None | SRR1183674 | Other | lineage4.9 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR1183307 | Other | lineage4.9 | None | ERR2229780 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR1183097 | Other | lineage4.9 | None | ERR1199021 | Other | lineage4.6.1.1 | None | SRR1202419 | Other | lineage4.9 | None | ERR560448 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR11465688 | Sensitive | lineage4.3.4.1 | None | ERR2228859 | Other | lineage4.8 | None | SRR1183290 | Other | lineage4.9 | None | SRR12199468 | Sensitive | lineage4.9 | None | SRR1183282 | Other | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | ERR2228873 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | SRR1791940 | Other | La1.8.1 | None | ERR560438 | Other | lineage4.9 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR1792247 | Other | La1.7.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR1183237 | Other | lineage4.9 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | SRR1180830 | Other | lineage4.9 | None | ERR1199039 | Sensitive | lineage4.6.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR1180717 | Other | lineage4.9 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7131251 | Other | lineage2.2.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR7131053 | Other | lineage2.2.1 | None | ERR2229358 | Other | lineage4.8 | None | SRR7069981 | Other | lineage3 | None | SRR6045158 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR124451 | Sensitive | lineage2.2.2 | None | SRR1183132 | Other | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR12420612 | Sensitive | lineage4.5 | None | ERR2228888 | Other | lineage4.8 | None | SRR1180666 | Other | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR1202421 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR1181199 | Other | lineage4.9 | None | ERR2228874 | Other | lineage4.8;lineage4.9 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1183212 | Other | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1140691 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR1180061 | Other | lineage4.9 | None |
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