EBG00000313325 - n.55C>T


Drug resistance types
21 Sensitive 0 RR-TB 3 HR-TB 0 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
lineage4.9 30
lineage2.2.2 2
lineage4.1.2.1 2
La1.2.BCG;lineage4.9 5
La1.8.1 2
lineage4.3.2.1 2
lineage4.1.2.1;lineage4.9 1
lineage2.2.1 5
lineage4.8 5
lineage4.6.1.1 5
lineage4.3.4.2.1 2
lineage4.3.4.1 2
lineage4.3.3 2
lineage2.2.2;lineage4.9 1
lineage6.2.3 1
La1.7.1 1
lineage4.1.1.1 1
lineage4.3.4.1;lineage4.9 1
lineage1.1 1
lineage3 1
lineage4.1.1.3 2
lineage4.8.1 1
lineage4.5 1
lineage1.2.2.2 2
lineage4.8;lineage4.9 1
lineage4.4.1.1;lineage4.6.1.2 1
spoligotype Counts
spoligotype Count
None 80
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1182965 Other lineage4.9 None
SRR1182953 Other lineage4.9 None
SRR124453 HR-TB lineage2.2.2 None
SRR1180803 Other lineage4.9 None
ERR2446433 Other lineage4.1.2.1 None
ERR560440 Sensitive La1.2.BCG;lineage4.9 None
SRR8073606 Other La1.8.1 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1181392 Other lineage4.9 None
ERR560443 Sensitive La1.2.BCG;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR6981912 Sensitive lineage4.3.2.1 None
SRR1183621 Other lineage4.9 None
SRR1183674 Other lineage4.9 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
SRR2101685 Sensitive lineage4.9 None
SRR1183307 Other lineage4.9 None
ERR2229780 Other lineage4.9 None
SRR6045957 Other lineage4.9 None
SRR7131123 Other lineage4.8 None
SRR1183097 Other lineage4.9 None
ERR1199021 Other lineage4.6.1.1 None
SRR1202419 Other lineage4.9 None
ERR560448 HR-TB La1.2.BCG;lineage4.9 None
ERR7801178 Other lineage4.3.4.2.1 None
ERR11465688 Sensitive lineage4.3.4.1 None
ERR2228859 Other lineage4.8 None
SRR1183290 Other lineage4.9 None
SRR12199468 Sensitive lineage4.9 None
SRR1183282 Other lineage4.9 None
SRR7131122 Other lineage2.2.1 None
SRR7131169 Other lineage4.1.2.1 None
ERR2228873 Other lineage4.8 None
ERR10796597 Other lineage4.3.3 None
SRR124452 Sensitive lineage2.2.2;lineage4.9 None
SRR1791940 Other La1.8.1 None
ERR560438 Other lineage4.9 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR10796630 Other lineage6.2.3 None
SRR1792247 Other La1.7.1 None
ERR10796562 Other lineage4.3.4.1 None
SRR6982037 Sensitive lineage4.1.1.1 None
ERR10796565 Other lineage4.9 None
SRR1183237 Other lineage4.9 None
ERR1199007 Sensitive lineage4.6.1.1 None
SRR1180830 Other lineage4.9 None
ERR1199039 Sensitive lineage4.6.1.1 None
SRR6982414 Sensitive lineage4.9 None
SRR1180717 Other lineage4.9 None
ERR560441 Sensitive La1.2.BCG;lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR7131251 Other lineage2.2.1 None
ERR7801177 Other lineage4.3.4.2.1 None
SRR12199472 Sensitive lineage1.1 None
SRR7131053 Other lineage2.2.1 None
ERR2229358 Other lineage4.8 None
SRR7069981 Other lineage3 None
SRR6045158 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR1198988 Sensitive lineage4.6.1.1 None
SRR124451 Sensitive lineage2.2.2 None
SRR1183132 Other lineage4.9 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6045909 Other lineage4.8.1 None
SRR12420612 Sensitive lineage4.5 None
ERR2228888 Other lineage4.8 None
SRR1180666 Other lineage4.9 None
SRR6982138 Sensitive lineage4.1.1.3 None
SRR1202421 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
ERR10796564 Other lineage4.3.3 None
SRR1181199 Other lineage4.9 None
ERR2228874 Other lineage4.8;lineage4.9 None
ERR560442 Sensitive La1.2.BCG;lineage4.9 None
SRR1183212 Other lineage4.9 None
SRR7070369 Other lineage1.2.2.2 None
SRR1140691 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
SRR1180061 Other lineage4.9 None