EBG00000313339 - n.1515A>G
Drug resistance types
2 Sensitive
23 RR-TB
0 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage4.9 | 8 |
| lineage3 | 8 |
| lineage2.2 | 2 |
| lineage4.8 | 11 |
| lineage1.1.3.1 | 3 |
| lineage4.7 | 1 |
| lineage4.1 | 3 |
| lineage4.1.2.1 | 8 |
| lineage4.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage1.2.1.1 | 2 |
| lineage4.3.3 | 6 |
| 3 | |
| lineage4.8.1 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8.2 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4 | 6 |
| lineage4.2.2 | 1 |
| lineage4.3.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.6 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4814789 | Other | lineage3 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814783 | Other | lineage4.7 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815898 | Other | lineage3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4815956 | Other | lineage1.1.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4817060 | RR-TB | None | ERR4816464 | Other | lineage3 | None | ERR4816756 | RR-TB | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817853 | Other | lineage4.8.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818180 | Other | lineage4.8 | gb | ERR4818219 | Other | lineage4.3.2.1 | gb | ERR4818570 | Other | lineage4.3.3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | ERR4820318 | Other | lineage4.2.2 | None | ERR4820324 | Other | lineage4 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820348 | Other | lineage4.1.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR2514943 | Other | lineage4.8 | gb | ERR2515093 | Other | lineage4.8.2 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4820107 | RR-TB | None | ERR4821167 | Other | lineage4.8 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821196 | Sensitive | lineage4.1 | gb | ERR4822150 | Other | lineage4.8 | gb | ERR4821325 | Other | lineage3 | None | ERR4822105 | Other | lineage4.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6044841 | Other | lineage4.9 | None | ERR4821519 | Other | lineage3 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | SRR6045071 | Other | lineage4.3.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6046710 | Other | lineage4.8.2 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR6046815 | Other | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796635 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796628 | Other | lineage4.3.3 | None |
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