EBG00000313339 - n.2856G>T


Drug resistance types
39 Sensitive 34 RR-TB 12 HR-TB 37 MDR-TB 18 Pre-XDR-TB 1 XDR-TB 184 Other
lineage Counts
lineage Count
lineage4.9 59
lineage2.2.1 42
lineage4.4.1.1 11
lineage4.8.1 3
lineage5.1.1 2
lineage3.1.2.1 5
lineage4.3.1.1 6
lineage2.2.2 5
lineage4.1.2 6
lineage3 24
lineage4.1.2.1 18
lineage4.1.1.3.1;lineage4.9 1
lineage4.8 33
lineage4.3.3 16
lineage4.3.4.2 3
lineage4.1.1.3 3
lineage1.2.1.2.1 1
lineage4.3 2
lineage4.1.1.3.1 2
1
lineage4.2.1.1;lineage4.3.3 1
lineage4.6 1
lineage1.2.1.1 2
lineage4.2.1 7
lineage3.1.1 5
lineage4.2.2.2 6
lineage2.2.1;lineage4 1
lineage4.5 2
lineage4.3.2 2
lineage4.6.2.2 4
lineage6.1.3 1
lineage2.2.1.1 5
lineage4.2.2 2
lineage6.1.2 1
lineage4.1.1.1 6
lineage1.2.2 2
lineage4.3.4.1;lineage4.9 2
lineage4.7 4
lineage3.1.2.1;lineage4.9 1
lineage1.1.2 2
lineage4.6.5 1
lineage4.8.2;lineage4.9 1
lineage4.4.1.1.1 4
lineage1.1.3.1 2
lineage4.1.4 1
lineage2.2;lineage4 1
lineage4.8.2 1
lineage6.3.1 1
lineage4.4.2 1
lineage4.3.4.2;lineage4.9 1
lineage4.1 1
lineage3.1.1;lineage4 1
lineage4.3.4.2.1 1
lineage1.2.2.2 2
lineage4.6.1.2 1
lineage1.1.3.2 1
La1.8.1 1
lineage3;lineage4 1
lineage4.1.3 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 325
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183213 Other lineage4.9 None
SRR9971223 Other lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR502517 Other lineage5.1.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR18002930 MDR-TB lineage2.2.1 None
ERR10796578 Other lineage2.2.1 None
ERR867544 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR4817294 Other lineage4.1.2 None
SRR7070419 Other lineage3 None
ERR4819198 Other lineage2.2.1 None
ERR3276170 Other lineage4.1.2.1 nl
ERR9117812 Other lineage4.3.1.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR18213726 Other lineage3 None
SRR6045591 Other lineage4.1.2.1 None
ERR4829337 Sensitive lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
ERR4815572 Other lineage4.1.2.1 None
SRR6044904 Other lineage3 None
SRR1180024 Other lineage4.9 None
SRR1183686 Sensitive lineage4.9 None
ERR4821679 Other lineage4.3.3 None
SRR7069097 Other lineage3.1.2.1 None
SRR7069027 MDR-TB lineage4.3.4.2 None
SRR15276982 XDR-TB lineage3 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4821054 Sensitive lineage3 None
ERR2514565 Sensitive lineage3.1.2.1 gb
ERR4821214 Other lineage1.2.1.2.1 None
ERR2514351 Sensitive lineage3 gb
ERR10796593 Other lineage4.3 None
ERR867571 Other lineage4.9 None
SRR18002908 Other lineage2.2.1 None
ERR867521 MDR-TB lineage2.2.1 None
SRR19241806 Sensitive lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR4816856 Other lineage4.1.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
ERR9117760 HR-TB lineage4.3 None
SRR1180831 Other lineage4.9 None
ERR10796576 Sensitive lineage4.9 None
SRR19303805 Sensitive lineage4.8 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR7070144 Other lineage4.8 None
ERR4817060 Other None
ERR4820151 Other lineage4.8 None
ERR4815452 Other lineage4.3.3 None
SRR22048536 Other lineage4.3.3 None
ERR4819011 Other lineage3.1.2.1 None
ERR2512606 HR-TB lineage3 None
SRR18002961 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6044936 Other lineage4.6 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4820736 Sensitive lineage4.1.2.1 gb
SRR5818388 Other lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR7070602 Other lineage4.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR7070134 Other lineage3.1.1 None
ERR4829247 MDR-TB lineage4.3.3 None
ERR4818897 Other lineage4.1.2.1 gb
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR7069931 Other lineage4.2.2.2 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR1181589 Other lineage4.9 None
SRR7069319 Other lineage4.5 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR6046815 Other lineage3 None
SRR18002941 RR-TB lineage2.2.1 None
ERR10796561 Other lineage4.3.2 None
ERR4816800 Other lineage4.8 gb
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR4819641 Other lineage4.6.2.2 None
ERR4819017 Other lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
ERR2513082 Other lineage4.1.2.1 gb
SRR16156697 RR-TB lineage2.2.1 None
SRR6046291 Other lineage3 None
SRR18002933 Other lineage2.2.1 None
ERR2513830 RR-TB lineage4.8 None
ERR4814362 Other lineage4.8 None
ERR10796599 Other lineage4.8 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675552 Other lineage4.9 None
SRR6046117 Other lineage4.9 None
SRR11342695 MDR-TB lineage4.8 None
ERR3806588 Other lineage6.1.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4815923 Sensitive lineage4.8 None
ERR867575 Other lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR4816610 Other lineage4.3.3 None
SRR6046852 MDR-TB lineage3 None
SRR11342682 Other lineage4.1.2 None
SRR6045603 Other lineage4.1.1.3 None
SRR1183190 Other lineage4.9 None
SRR10315579 Other lineage2.2.1.1 None
DRR188816 Other lineage4.2.2 None
SRR5818399 Sensitive lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR1180113 Other lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR10796563 Other lineage4.3.3 None
ERR4818126 Other lineage1.2.2 None
ERR4819528 RR-TB lineage3 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR5818386 Other lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR7070293 Other lineage4.8 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR10796559 Other lineage4.9 None
ERR4818570 Other lineage4.3.3 None
SRR1182900 Sensitive lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR19303876 Other lineage4.7 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR4822150 Other lineage4.8 gb
ERR867572 Other lineage4.9 None
ERR4814911 Other lineage4.3.3 None
SRR14801652 HR-TB lineage4.3.3 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR10796596 Other lineage4.9 None
ERR2515055 Sensitive lineage3 None
SRR5818464 Other lineage4.9 None
SRR6045516 Other lineage3.1.1 None
ERR4818977 Other lineage4.1.2.1 None
ERR9117788 Other lineage3 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR11342643 MDR-TB lineage4.1.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR1181299 Other lineage4.9 None
ERR978767 RR-TB lineage4.8 None
SRR1183548 Other lineage4.9 None
SRR1180647 Other lineage4.9 None
ERR4815467 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR7069518 Other lineage4.8 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR7070571 Sensitive lineage3 None
SRR7069648 Other lineage4.6.2.2 None
ERR867538 Other lineage4.2.2.2 None
ERR2886463 Sensitive lineage2.2.1 None
ERR4814930 Other lineage4.4.1.1 None
SRR18003052 Other lineage2.2.1.1 None
ERR4820075 Other lineage4.1.2.1 None
ERR10796598 Other lineage4.9 None
SRR1183091 Other lineage4.9 None
SRR11349153 RR-TB lineage4.1.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR1180569 Sensitive lineage4.9 None
SRR6045424 Other lineage1.1.2 None
ERR4814617 Other lineage1.1.3.1 None
SRR7069839 Other lineage4.8 None
SRR1183152 Other lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR3275465 Sensitive lineage2.2.1 nl
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR4818507 Other lineage4.1.2.1 None
SRR1180503 Other lineage4.9 None
SRR1183281 Other lineage4.9 None
SRR1183373 Other lineage4.9 None
SRR10315465 MDR-TB lineage4.4.1.1 None
ERR4819166 Other lineage3 gb
SRR8651617 Pre-XDR-TB lineage4.5 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR9901813 Sensitive lineage4.1.4 None
SRR7070320 Other lineage4.8 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR7070553 Other lineage3 None
ERR10796628 Other lineage4.3.3 None
ERR10796626 Other lineage4.1.2.1 None
ERR2512841 HR-TB lineage2.2.1 gb
ERR4818050 Sensitive lineage4.6.2.2 None
ERR2514943 Sensitive lineage4.8 gb
SRR7070469 Other lineage4.3.1.1 None
ERR4829328 Other lineage2.2.1 None
SRR7070446 Other lineage3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR4819772 Other lineage1.1.3.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR7070479 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
ERR867573 Other lineage4.9 None
ERR2851359 Other lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR4818988 Other lineage1.2.2 None
SRR7069193 Other lineage4.3.1.1 None
SRR1182878 Other lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SRR1181264 Sensitive lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR4821286 Other lineage4.8 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4819096 Other lineage4.4.1.1 None
SRR7070329 Other lineage3 None
SRR6045071 Other lineage4.3.1.1 None
ERR4818440 Other lineage6.3.1 None
SRR5818572 Sensitive lineage4.2.2.2 None
ERR4817189 Other lineage4.7 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR7069137 Other lineage4.8 None
ERR4816531 Other lineage4.1.2 None
ERR4821704 Other lineage4.3.3 None
SRR1180578 Other lineage4.9 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR6045422 Other lineage4.3.1.1 None
ERR10796577 Other lineage4.9 None
SRR1181569 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4820891 Sensitive lineage4.9 gb
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
SRR1173719 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4820410 RR-TB lineage3.1.1 None
SRR19303985 Sensitive lineage4.8 None
ERR10796636 Other lineage4.1.2.1 None
ERR2446445 Sensitive lineage2.2.1 nl
SRR1183531 Other lineage4.9 None
ERR4816667 Other lineage2.2.2 None
ERR4814623 Sensitive lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR1183339 Other lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR1180047 Other lineage4.9 None
ERR4820256 Other lineage2.2.1 None
SRR1180687 Other lineage4.9 None
SRR3675261 Other lineage1.2.1.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4818691 Other lineage4.8 None
ERR4814681 Other lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR2509886 Other lineage3 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815502 Other lineage4.1 None
ERR2027230 Other lineage4.2.2.2 None
SRR1735598 RR-TB lineage4.9 None
SRR6046275 Other lineage3.1.1;lineage4 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR4821761 Other lineage3 gb
SRR7069033 Sensitive lineage4.2.1 None
ERR4820742 Sensitive lineage4.3.4.2.1 None
SRR7070369 Other lineage1.2.2.2 None
ERR4818407 Other lineage4.3.2 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR10796635 Other lineage4.8 None
SRR7070223 HR-TB lineage3 None
SRR7069347 Other lineage4.1.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1183181 Sensitive lineage4.9 None
ERR4816310 HR-TB lineage4.6.1.2 None
SRR6045664 Other lineage4.2.1 None
SRR1183438 Other lineage4.9 None
SRR1181490 Other lineage4.9 None
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR1182958 Other lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR9117827 Other lineage1.2.2.2 None
ERR4821917 Sensitive lineage1.1.3.2 gb
ERR10796633 Other lineage4.3.4.2 None
ERR4821119 Other lineage4.4.1.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR1183684 Other lineage4.9 None
SRR1182954 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR3675230 Other lineage3;lineage4 None
ERR4820720 Other lineage4.1.2.1 None
SRR6046343 Other lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR18002976 Other lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
ERR4819002 HR-TB lineage4.8 None
SRR7069800 Other lineage3.1.2.1 None
SRR7070535 HR-TB lineage4.1.2.1 None
ERR2513298 Sensitive lineage4.8 gb
SRR7069441 Sensitive lineage4.8 None
SRR1180686 Other lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR6044983 Other lineage3.1.1 None
ERR10796555 Other lineage4.1.2.1 None
ERR867526 MDR-TB lineage2.2.1 None
ERR10796565 Other lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None