EBG00000313325 - n.233C>T
Drug resistance types
13 Sensitive
39 RR-TB
9 HR-TB
28 MDR-TB
10 Pre-XDR-TB
2 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 3 |
| lineage2.2.2 | 6 |
| lineage4.3.3 | 12 |
| lineage4.8 | 20 |
| lineage4.9 | 30 |
| lineage3;lineage4.9 | 2 |
| lineage3;lineage4 | 3 |
| La1.3 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.1.2.1 | 12 |
| lineage2.2.1 | 22 |
| lineage4.4.1.1 | 6 |
| lineage4.8.1 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.2.1 | 3 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 12 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage1.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage1.2.1.2.1 | 3 |
| lineage4.3.4.1 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage4.1.1.1 | 4 |
| lineage4.7 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage3.1.1 | 2 |
| La1.7.X-unk4 | 1 |
| La1.4 | 1 |
| lineage4 | 2 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage6.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage5 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| La1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 209 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796561 | Other | lineage4.3.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4817665 | Other | lineage4.8 | None | ERR3077969 | Other | La1.3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4822085 | Other | lineage4.8 | gb | ERR10796565 | Other | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR1173170 | Other | lineage4.9 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR1184329 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867569 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1181403 | Other | lineage4.9 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR10796634 | Other | lineage4.7 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR2446509 | Other | lineage3 | nl | SRR3675230 | Other | lineage3;lineage4 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1173740 | Other | lineage3;lineage4 | None | ERR4817189 | Other | lineage4.7 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR10796577 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | SRR16278274 | Other | La1.4 | None | ERR4820324 | Other | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4817060 | Other | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4820151 | Other | lineage4.8 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181256 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9125858 | Sensitive | lineage1.2.1.2.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4820328 | Other | lineage3 | gb | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058476 | Sensitive | lineage1.2.1.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4817874 | Other | lineage3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR2512968 | Sensitive | lineage3.1.2 | gb | ERR867570 | RR-TB | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4817194 | Sensitive | lineage4.1.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4814312 | Other | lineage4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4818691 | Other | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7851312 | Other | La1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1173770 | Other | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4818507 | Other | lineage4.1.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4818763 | Other | lineage3 | gb | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4819166 | Other | lineage3 | gb | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR2512606 | HR-TB | lineage3 | None | SRR21689637 | Sensitive | lineage4.1.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070223 | HR-TB | lineage3 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR978756 | Other | lineage4.8 | None |
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