Rv1630 - c.552G>C
Drug resistance types
45 Sensitive
41 RR-TB
31 HR-TB
31 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 4 |
| lineage4.9 | 87 |
| lineage2.2.1 | 15 |
| 13 | |
| La1.4 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.3 | 1 |
| lineage3 | 10 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 7 |
| lineage4 | 16 |
| lineage4.2;La1.7 | 1 |
| lineage4.1 | 1 |
| lineage4.5 | 1 |
| lineage3.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.9;lineage3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2 | 5 |
| lineage5.1.1 | 2 |
| lineage4.4.1.1;lineage1.2.2.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| La1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 4 |
| lineage4.9.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 218 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3675488 | HR-TB | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815310 | Other | None | ERR4815471 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750907 | RR-TB | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815550 | Other | lineage4 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817433 | Sensitive | lineage4.9;lineage3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817301 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4830353 | Other | None | SRR6046376 | Other | lineage3 | None | SRR6046644 | HR-TB | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6789628 | HR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR10796629 | Other | lineage4 | None | ERR10748430 | MDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769555 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6358951 | HR-TB | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787336 | Other | lineage6 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140736 | RR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None |
|---|
