Rv1630 - c.552G>C


Drug resistance types
49 Sensitive 29 RR-TB 28 HR-TB 35 MDR-TB 8 Pre-XDR-TB 2 XDR-TB 42 Other
lineage Counts
lineage Count
lineage4.9 74
M.canetti;lineage2.2 2
lineage4.8.1 3
lineage3 6
lineage4.6.1.2 4
lineage4.3.3 4
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.8.1 1
lineage3.1.2.1 1
lineage4.8 8
La1.7;lineage4.9 2
lineage2.2.1.1 1
lineage4.2.2.2 1
lineage3.1.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage3;lineage4 1
lineage4.3.2.1 2
lineage2.2.1 17
lineage4 2
lineage4.5 1
lineage1.2.2.2 1
La1.3 1
lineage1.2.2.1;lineage4.4.1.1 2
lineage2.2.2 3
La1.7 1
lineage4.1.1.3 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.9.1 1
La1.4 1
lineage2.2.1;lineage4.9 3
lineage4.4.1.1.1 3
lineage4.1.2.1;lineage4.4.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2.1 3
lineage4.1.2 2
lineage2.2.1;lineage4 2
lineage5.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.4.1.1 1
lineage2;lineage4.9 1
La1.7;lineage4.3.4.1 1
lineage4.8.2;lineage4.9 1
La1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.2.1 2
lineage4.4.1.2 1
La1.7.X-unk4 1
M.canetti;lineage4.9 2
lineage4.3.4.2.1 4
lineage6.1.3 1
La2;lineage2.2 1
lineage1.1.1 1
lineage4.1.1.1 2
lineage2.2;lineage4 1
lineage2.2;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 193
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR473334 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR20632814 Sensitive lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1180345 Other lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR6046839 Other lineage4.9 None
ERR10796628 Other lineage4.3.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR11462861 Other La1.8.1 None
ERR10796564 Other lineage4.3.3 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR1181402 Sensitive lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR22424787 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR978767 RR-TB lineage4.8 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR9971112 HR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4830353 HR-TB La1.7 None
ERR4769444 HR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4819383 RR-TB lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR502470 RR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
SRR1180413 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR473323 HR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR6045359 HR-TB lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR4769530 RR-TB lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR11342682 Other lineage4.1.2 None
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR1181283 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR10796565 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR1175052 HR-TB lineage4.9 None
ERR751345 Other lineage5.1.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR11342693 MDR-TB lineage4.8.1 None
ERR867541 MDR-TB lineage4.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR4769418 Other La1.2 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR10796636 Other lineage4.1.2.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3445487 Other La1.7.X-unk4 None
SRR11342658 RR-TB lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1180410 Sensitive lineage4.9 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
SRR28351408 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR3675441 RR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6359070 Sensitive lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1180375 Sensitive lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786076 Other lineage3 None
SRR16156804 Sensitive lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4596902 MDR-TB lineage3 None
ERR4819314 HR-TB lineage1.1.1 None
ERR176741 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR1184021 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR10796578 Other lineage2.2.1 None
SRR6046376 Other lineage3 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR11465626 Sensitive lineage4.3.4.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR978766 RR-TB lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR1180444 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180446 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR1735598 RR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4815815 Sensitive lineage4.9 None