EBG00000313325 - n.51T>C


Drug resistance types
74 Sensitive 15 RR-TB 18 HR-TB 10 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 88 Other
lineage Counts
lineage Count
lineage2.2.1 16
lineage4.6.1.1 9
lineage3 9
lineage4.9 54
lineage4.8 10
lineage4.6.1 4
lineage4.3.2.1 8
lineage4.1.2.1 4
lineage4 12
lineage4.1.1 6
11
lineage4.1.2 4
lineage4.1.1.3 2
lineage4.1.1.3.1 1
lineage3.1.2.2 1
lineage3.1.1 2
lineage4.2.1.1 1
lineage4.6.2.2 1
lineage2.2 3
lineage4.4 1
lineage4.4.1.1 2
lineage4;lineage2.2.1 1
lineage4;lineage2 1
La1.8.1 9
lineage4.3.3 5
lineage4.3.4.2 1
lineage4.3.4.1 4
lineage4.8;lineage4.2.1 1
lineage4.3.4.2.1 4
lineage2.2.1.1 2
lineage4.9;lineage4.3.4 1
lineage4.6.5 1
lineage4.1.4 1
lineage4.9;La1.8 1
lineage4.2.2.2;lineage3 1
La1.8.2 2
La1.2 3
lineage1.2.2.2 1
lineage4.9;lineage2.2 1
lineage4.6.1.2;lineage4.4.1.1 1
lineage1.2.2 1
lineage4.9;lineage1.1 1
lineage4.9;lineage4.4.2 1
lineage1.1 1
lineage2 1
La1.7.1 1
lineage4.9.1 1
spoligotype Counts
spoligotype Count
None 209
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SAMN02381005 Other lineage4.6.1.1 None
SRR3675230 RR-TB lineage3 None
ERR1199021 Other lineage4.6.1.1 None
ERR2229031 Other lineage4.9 None
ERR2229033 Other lineage4.8 None
ERR1199039 Sensitive lineage4.6.1 None
ERR2229336 Other lineage4.8 None
ERR2229780 Other lineage4.9 None
ERR2229358 Other lineage4.8 None
SRR4033434 Sensitive lineage4.3.2.1 None
SRR4033203 Sensitive lineage4.9 None
SRR4034391 MDR-TB lineage4.1.2.1 None
ERR2228874 Other lineage4 None
ERR2228810 RR-TB lineage4 None
ERR2228859 RR-TB lineage4 None
ERR2228822 Other lineage4.9 None
ERR1199007 Sensitive lineage4.6.1.1 None
ERR2228873 Other lineage4.8 None
SRR4034769 Other lineage4.1.1 None
ERR2228888 Other lineage4.8 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR1199009 Sensitive lineage4.6.1.1 None
ERR245790 Sensitive None
ERR2693238 HR-TB lineage4.9 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR5007165 MDR-TB lineage3 None
ERR2446433 Other lineage4.1.2.1 None
SRR6045909 Other lineage4.8 None
SAMN02350456 Sensitive lineage4.3.2.1 None
SRR6046117 RR-TB lineage4.9 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6044830 Other lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6046015 Other lineage4.9 None
SRR6044925 Sensitive lineage4.9 None
SRR6045045 Other lineage2.2.1 None
SRR6045957 Other lineage4.9 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045289 Other None
SRR6045205 Sensitive lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6045158 Other lineage4.9 None
ERR2851371 Other lineage4.9 None
SRR6045379 Other None
SRR6046275 Other lineage3.1.1 None
SRR6046281 Other lineage4.9 None
SRR6046743 Other lineage3 None
SRR6397727 Other lineage4.2.1.1 None
SRR6046815 Other lineage3 None
ERR502472 Other lineage4.6.2.2 None
SRR6982078 Sensitive None
SRR6982102 Other lineage2.2.1 None
ERR502482 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6856087 Sensitive lineage4 None
ERR502483 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982178 Sensitive lineage2.2 None
SRR6896162 Sensitive lineage4.9 None
SRR6982414 Sensitive lineage4.9 None
SRR6982138 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6982115 Sensitive lineage4 None
SRR6982139 Sensitive lineage4.9 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982196 Sensitive None
SRR6982195 RR-TB lineage4.4 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982362 Other lineage4.3.2.1 None
SRR6981912 Sensitive None
SRR6981993 Other lineage4.3.2.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6982508 Sensitive lineage4.9 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982035 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982011 Other lineage4.1.1 None
SRR6982014 Other lineage4.1.1 None
SRR6982070 RR-TB None
SRR6855998 Sensitive lineage4.9 None
SRR6982075 Sensitive lineage3 None
SRR6982405 Sensitive None
SRR7131251 Other lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR5162108 Other La1.8.1 None
ERR5162133 Other La1.8.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6982558 Other lineage4.3.4.2 None
SRR7131053 Other lineage2.2.1 None
SRR7131068 Other lineage4.8 None
SRR8073606 Other La1.8.1 None
SRR7131123 Other lineage4.8 None
SRR7131122 Other lineage2.2.1 None
SRR7131169 Other lineage4.1.2.1 None
ERR10796562 Other lineage4.3.4.1 None
SRR7535054 Sensitive lineage4.6.1 None
SRR7535074 Sensitive lineage3 None
SRR7645808 HR-TB lineage4.8;lineage4.2.1 None
ERR11466423 HR-TB lineage4.3.4.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR7535053 Sensitive lineage3 None
SRR7535079 Sensitive lineage4.6.1.1 None
ERR037234 Sensitive lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796564 Other lineage4.3.3 None
ERR10796578 Other lineage2.2.1 None
ERR10796565 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796568 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796590 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796597 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR10796630 HR-TB None
ERR10796627 Other lineage4 None
ERR405191 Other lineage4.9 None
ERR10796634 Other lineage4 None
ERR11043121 MDR-TB lineage4.6.5 None
ERR11465688 Sensitive lineage4.3.4.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR405190 Sensitive lineage4.9 None
ERR4187604 RR-TB La1.8.1 None
ERR4132447 HR-TB lineage4 None
ERR4188372 RR-TB La1.8.1 None
ERR4188187 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4407530 HR-TB lineage4.1.2.1 None
ERR4627379 Other La1.8.1 None
ERR4596929 MDR-TB lineage4.2.2.2;lineage3 None
ERR4627376 Other La1.8.1 None
ERR6149874 Other La1.8.2 None
ERR4769505 Other lineage4.9 None
ERR5908229 Sensitive lineage4.3.3 None
ERR473278 Sensitive lineage4.9 None
ERR6140667 Other La1.8.2 None
ERR6201802 Other La1.2 None
ERR6198389 Other La1.2 None
ERR773806 Sensitive lineage2.2.1 None
ERR6201843 Other La1.2 None
ERR736816 Other lineage4.9 None
ERR751317 Sensitive lineage4.9 None
ERR779680 Sensitive lineage4.3.4.2.1 None
SRR1062895 Other lineage4.6.1.1 None
ERR7801177 Other lineage4.3.4.2.1 None
ERR9117747 HR-TB lineage4.8 None
ERR9119101 Sensitive lineage4.3.3 None
SRR1049031 HR-TB lineage4.9 None
ERR7801178 Other lineage4.3.4.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR1019127 Other lineage4.9;lineage2.2 None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1172808 Other lineage4.9 None
SRR1140627 Other lineage4.6.1 None
SRR1140677 MDR-TB lineage4.6.1 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1140586 HR-TB lineage4.9 None
SRR1140691 HR-TB lineage4.6.1.2;lineage4.4.1.1 None
SRR1181136 Sensitive lineage2.2 None
SRR1173521 HR-TB lineage4.9 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1181161 Other lineage4.9 None
SRR1181319 Other lineage2.2.1 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1181250 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR12199442 HR-TB lineage1.2.2 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR124453 HR-TB None
SRR12199472 Sensitive lineage1.1 None
SRR124451 HR-TB None
SRR124452 HR-TB lineage2 None
SRR1791940 Other La1.8.1 None
SRR12882020 Other lineage3.1.1 None
SRR15315871 Sensitive lineage4.9 None
SRR2101685 Sensitive lineage4.9 None
SRR2101617 Other lineage4.1.1 None
SRR2101684 Other lineage2.2.1.1 None
SRR1792247 Other La1.7.1 None
SRR19303820 RR-TB lineage4.8 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21728339 Other lineage3 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR22175227 Pre-XDR-TB lineage3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR1198988 Sensitive lineage4.6.1.1 None