EBG00000313339 - n.810A>G
Drug resistance types
9 Sensitive
30 RR-TB
9 HR-TB
28 MDR-TB
19 Pre-XDR-TB
1 XDR-TB
98 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 32 |
| La1.7;lineage4.9 | 2 |
| 2 | |
| lineage4.8.1 | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.8 | 14 |
| lineage3 | 9 |
| lineage4.1.1.3.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4.1.1.1 | 5 |
| lineage4.9 | 36 |
| lineage4.3.3 | 11 |
| lineage2.2.1.1 | 3 |
| lineage4.2.2.2 | 6 |
| lineage6.1.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1 | 7 |
| lineage2.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.2 | 3 |
| lineage4.6 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage6.1.3 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.1.3 | 1 |
| lineage1.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| La1.2 | 1 |
| M.canetti | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4817069 | RR-TB | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070223 | HR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7069391 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR10796591 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR11342646 | HR-TB | lineage3 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR867569 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR6044936 | Other | lineage4.6 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796564 | Other | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1735596 | RR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4814976 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR9117788 | Other | lineage3 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR10796560 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR15276982 | XDR-TB | lineage3 | None | SRR10808730 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR5007165 | Other | lineage3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR1180831 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817060 | Other | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR4814362 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR2229234 | Sensitive | lineage4.8 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR10315579 | Other | lineage2.2.1.1 | None | DRR188816 | Other | lineage4.2.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | ERR867572 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR6045957 | Other | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818605 | Other | M.canetti | None | SRR18002908 | Other | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None |
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