EBG00000313339 - n.2547C>T
Drug resistance types
19 Sensitive
26 RR-TB
10 HR-TB
13 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
119 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 59 |
| lineage4.3.2 | 2 |
| lineage2.2.1 | 21 |
| lineage4.1.2.1 | 10 |
| lineage4.9 | 29 |
| lineage4.3.3 | 9 |
| lineage3 | 9 |
| lineage6.1.3 | 1 |
| lineage5.1 | 1 |
| lineage4.1.1.1 | 4 |
| lineage4.4.1.2 | 2 |
| lineage4.6.2.2 | 4 |
| lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.3 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage5 | 1 |
| lineage4.5 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 192 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173361 | MDR-TB | lineage4.6.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7069839 | Other | lineage4.8 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR5864713 | MDR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4820151 | Other | lineage4.8 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR978761 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR10796565 | Other | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR2229810 | Sensitive | lineage4.9 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR5818446 | Other | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR7070461 | Other | lineage3 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4192364 | Sensitive | lineage5.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR5818460 | Other | lineage4.9 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR4819191 | Other | lineage4.6.2.2 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR2515032 | Other | lineage3 | None | ERR10796598 | Other | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4821286 | Other | lineage4.8 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4817874 | Other | lineage3 | None | ERR2229436 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | SRR7069518 | Other | lineage4.8 | None | SRR7070320 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR10315579 | Other | lineage2.2.1.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4816967 | Other | lineage5 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR4819324 | Other | lineage4.8 | gb | ERR978735 | Other | lineage4.8 | None | ERR4818691 | Other | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR2228965 | Other | lineage4.8 | None | SRR5818408 | Other | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR2229811 | Other | lineage4.8 | dk | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818469 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR978694 | Other | lineage4.8 | None | SRR5818388 | Other | lineage4.9 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR978751 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR2229541 | Other | lineage4.8 | None | SRR5818397 | Other | lineage4.9 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR978747 | Other | lineage4.8 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR1173833 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | ERR4819166 | Other | lineage3 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR10796635 | Other | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR10796599 | Other | lineage4.8 | None |
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