EBG00000313339 - n.1447T>A
Drug resistance types
2 Sensitive
64 RR-TB
12 HR-TB
46 MDR-TB
22 Pre-XDR-TB
1 XDR-TB
154 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 22 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage4.1.2.1 | 23 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 9 |
| lineage4.6.1.2 | 5 |
| lineage4 | 13 |
| lineage4.8 | 21 |
| lineage4.3.2.1 | 3 |
| lineage4.8.1 | 2 |
| 9 | |
| lineage4.9 | 40 |
| lineage2.2.1 | 44 |
| lineage4.4.2 | 3 |
| La2 | 1 |
| lineage4.2.2 | 2 |
| lineage2.2.2 | 3 |
| lineage1.2.2 | 1 |
| lineage2.2 | 3 |
| lineage1.1.2 | 5 |
| lineage4.7 | 6 |
| lineage4.1.3 | 1 |
| lineage1.1.3.1 | 5 |
| lineage4.3.3 | 14 |
| lineage4.6.5 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage5 | 1 |
| lineage4.1.2 | 3 |
| lineage3.1.2 | 1 |
| lineage3.1.1 | 3 |
| lineage1.1.1 | 1 |
| lineage4.6 | 2 |
| lineage1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.4 | 1 |
| lineage4.1.1 | 2 |
| lineage1.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 1 |
| lineage5.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| La1.8.1 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| La1.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 301 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049672 | Other | lineage3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR4814312 | Other | lineage4 | None | SRR18213721 | Other | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815118 | Other | lineage2.2 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815618 | Other | lineage4.8 | None | ERR4814362 | Other | lineage4.8 | None | ERR4814341 | Other | lineage4.7 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814507 | Other | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815467 | Other | lineage3 | None | ERR4814745 | Other | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4814783 | Other | lineage4.7 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815548 | Sensitive | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815898 | Other | lineage3 | None | ERR4815956 | Other | lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816232 | Other | lineage4 | None | ERR4817060 | RR-TB | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4817389 | Other | lineage3 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817294 | Other | lineage4.1.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818988 | Other | lineage1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4817874 | Other | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818449 | Other | lineage4.3.3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4820348 | Other | lineage4.1.2.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819982 | RR-TB | lineage2.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR1023509 | Other | None | ERR2514962 | Other | lineage4.4 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820833 | HR-TB | None | ERR4820187 | Other | lineage4.3.3 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821325 | Other | lineage3 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822173 | Other | lineage4.7 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821568 | Other | lineage4.3.4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046540 | HR-TB | None | SRR6046376 | Other | lineage3 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046874 | Other | lineage4.5 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR5087846 | Other | La1.8.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4819166 | Other | lineage3 | gb | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796634 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR10796635 | Other | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR5864958 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117789 | Sensitive | lineage4.8 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None |
|---|
