Rv1630 - c.555G>C
Drug resistance types
43 Sensitive
25 RR-TB
75 HR-TB
18 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
73 Other
lineage Counts
| lineage | Count |
|---|---|
| 76 | |
| lineage4 | 34 |
| lineage4.9 | 60 |
| lineage3.1 | 3 |
| lineage4.4 | 1 |
| lineage4.8 | 6 |
| La1.7.1 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1 | 18 |
| lineage4.1 | 1 |
| lineage4;lineage3;lineage2.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.1;lineage1 | 1 |
| lineage2.2 | 1 |
| La1.8.1 | 3 |
| lineage4.2.2.2 | 2 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage3 | 4 |
| lineage4.7 | 3 |
| lineage4.2.1 | 3 |
| lineage5.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.1.2 | 1 |
| lineage4.1.3 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196768 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1184388 | Other | None | SRR12142341 | HR-TB | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR11081258 | Other | lineage4.8 | None | SRR19303884 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692825 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR25827605 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR176779 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675465 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675236 | HR-TB | None | SRR3675279 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675311 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2229542 | Other | lineage4.8 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675572 | Other | None | SRR3675555 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4816550 | Sensitive | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818615 | Other | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007188 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046540 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | ERR4831638 | Sensitive | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6789626 | Other | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR7496509 | Other | None | ERR502943 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323043 | HR-TB | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063859 | HR-TB | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR3283028 | Other | None | ERR10796629 | Other | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811142 | MDR-TB | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5336148 | Other | None | ERR6359045 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787197 | Other | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1172951 | Other | None | SRR1140736 | RR-TB | None | SRR1172857 | MDR-TB | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None |
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