Rv1630 - c.573G>C
Drug resistance types
62 Sensitive
45 RR-TB
29 HR-TB
27 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 91 |
| 27 | |
| lineage4.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3 | 10 |
| La1.8.1 | 2 |
| lineage2.2.1 | 15 |
| lineage5.1.1 | 1 |
| lineage4.8 | 12 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 24 |
| lineage4.3.4 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.2 | 1 |
| lineage3.1.2.1 | 2 |
| La1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.6.5 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 226 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821143 | RR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982506 | Sensitive | lineage4.3.2.1 | None | ERR502943 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4769555 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6358991 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1140736 | RR-TB | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172310 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173310 | MDR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16156775 | Other | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR2101721 | Sensitive | lineage4.3.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815310 | Other | None | SRR12708416 | Sensitive | lineage4.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR1750907 | RR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR176751 | HR-TB | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR212034 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR4816852 | Other | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR4817301 | Other | lineage4.9 | None | ERR2228890 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5341396 | Other | lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None |
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