EBG00000313325 - n.1113A>G
Drug resistance types
70 Sensitive
29 RR-TB
25 HR-TB
33 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
168 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 2 |
| lineage4.8.1 | 4 |
| lineage2.2.1 | 44 |
| lineage4.1.1.3 | 6 |
| lineage4.8 | 35 |
| lineage4.9 | 65 |
| lineage4.1.1.3.1 | 2 |
| lineage4.4.1.1.1 | 4 |
| lineage4.1.2.1 | 27 |
| lineage4.3.3 | 18 |
| lineage4.6.2.2 | 7 |
| lineage4.1.1.1 | 6 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.1.3.1 | 4 |
| lineage4.7 | 3 |
| lineage4.8.2 | 1 |
| lineage2.2.2 | 4 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4 | 5 |
| lineage4.4.1.1 | 7 |
| lineage3 | 18 |
| lineage3.1.1 | 6 |
| lineage1.2.2.2 | 3 |
| lineage4.3.1.1 | 3 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| 3 | |
| lineage1.2.1.1 | 1 |
| lineage4.2.1 | 6 |
| lineage3.1.3 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| La1.8.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.6 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| La1.3 | 1 |
| lineage4.5 | 2 |
| lineage4.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3 | 2 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 340 |
Geographic prevalence
Country level data for this variant is available for 33 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819011 | Other | lineage3.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR18002961 | Other | lineage2.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR4816562 | Other | lineage4.8 | None | ERR2513619 | Sensitive | lineage4.8 | gb | ERR4814763 | Other | lineage2.2.1 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR11342680 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2513298 | Sensitive | lineage4.8 | gb | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4820723 | Other | lineage4.4.1.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR7496471 | Sensitive | lineage4 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4817194 | Sensitive | lineage4.1.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4816464 | Other | lineage3 | None | ERR4820891 | Sensitive | lineage4.9 | gb | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR6650238 | Other | lineage1.1.3.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR6045957 | Other | lineage4.9 | None | ERR10796580 | Other | lineage4 | None | SRR7069839 | Other | lineage4.8 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4815956 | Other | lineage1.1.2 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR3283008 | Other | lineage4.9 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR4818507 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4816711 | Sensitive | lineage4.1.1.1 | gb | SRR1180410 | Sensitive | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820690 | Sensitive | lineage4.1.1 | gb | ERR4817060 | Other | None | ERR4820151 | Other | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | ERR867566 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR2513223 | Sensitive | lineage4.1.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | SRR1180375 | Sensitive | lineage4.9 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR18213721 | Other | lineage4.8 | None | SRR7617847 | Other | La1.8.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR4817665 | Other | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR2513259 | Other | lineage3 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR867575 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4829328 | Other | lineage2.2.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR978765 | RR-TB | lineage4.8 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4820107 | Other | lineage1.2.1.2.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4821286 | Other | lineage4.8 | None | ERR10796594 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR10796578 | Other | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR867544 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4815467 | Other | lineage3 | None | ERR3283051 | Other | lineage4.9 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR11465829 | Sensitive | lineage4.9 | None | ERR4816699 | Other | lineage4.6 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR7236330 | Other | La1.8.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR4814623 | Sensitive | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4819982 | Sensitive | lineage2.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4769517 | Other | La1.3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819593 | Sensitive | lineage4.5 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR7496523 | Other | lineage4.7 | None | SRR7070144 | Other | lineage4.8 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR4815804 | Sensitive | lineage4.2.1 | gb | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4819166 | Other | lineage3 | gb | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818556 | Sensitive | lineage3 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR7069181 | Sensitive | lineage4.8 | None | ERR4820787 | Other | lineage3.1.1 | gb | ERR4818548 | Other | lineage4.3.3 | None | ERR4814362 | Other | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4816610 | Other | lineage4.3.3 | None | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR1184021 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR4817047 | Sensitive | lineage4.2.2.1 | gb | SRR3675230 | Other | lineage3;lineage4 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR4818988 | Other | lineage1.2.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4817874 | Other | lineage3 | None | ERR4822150 | Other | lineage4.8 | gb | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR867572 | Other | lineage4.9 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR7070329 | Other | lineage3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4820829 | Other | lineage4.8 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR4816334 | Other | lineage4.6.2.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR7070419 | Other | lineage3 | None | ERR4814745 | Other | lineage4.6.5 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR7236399 | Other | La1.8.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21713567 | Other | lineage4.5 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4818785 | Sensitive | lineage4.1.2.1 | None | ERR4816696 | Other | lineage3 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR10796593 | Other | lineage4.3 | None | ERR4820324 | Other | lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815784 | Other | lineage2.2.1 | gb | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | ERR4820746 | Other | lineage3 | None | ERR4796577 | HR-TB | None | ERR4816690 | Other | None | ERR4815452 | Other | lineage4.3.3 | None | SRR22048536 | Other | lineage4.3.3 | None |
|---|
