EBG00000313339 - n.2094C>A


Drug resistance types
16 Sensitive 54 RR-TB 9 HR-TB 39 MDR-TB 14 Pre-XDR-TB 1 XDR-TB 176 Other
lineage Counts
lineage Count
lineage4.3.3 13
lineage4.1.2.1;lineage4.9 1
lineage2.2.1 43
lineage1.1.3.1 3
lineage4.7 2
lineage3.1.2.1;lineage4.9 1
lineage3 24
lineage4.4.1.1 7
lineage4.8.1 4
lineage4.8 66
lineage4.2.2.2 7
lineage4.3.1.1 5
lineage3.1.1;lineage4.9 1
lineage1.2.2.2 5
lineage4.3.1 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.9 21
lineage4.6.5 1
lineage4.3.4.1;lineage4.9 2
lineage4.4.1.1.1 5
lineage4.1.1.3 7
lineage4.4.2 2
lineage4.3.4.2 2
lineage4.6.2.2 2
lineage4.2.1.1 1
lineage4.1.2.1 13
lineage2.2.2 2
lineage4.5 2
lineage3.1.1 5
lineage3.1.2.1 4
lineage4.3.4.1 2
lineage4.2.1.1;lineage4.3.3 1
lineage1.2.1.1 2
lineage4.1.1.3.1 2
lineage4.2.1 4
lineage4.1.1.1 7
lineage4 2
lineage2.2.1.1 3
lineage4.3.4.2.1 2
lineage4.2.2 1
lineage3.1.2;lineage4.1.1.3.1 1
lineage1.1.2 3
lineage1.1.3.2 1
lineage4.1.2 4
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.3 1
lineage3.1.2 1
1
lineage4.6 1
lineage4.2;lineage4.9 1
lineage6.1.3 1
lineage4.3.2.1 2
lineage6.1.2 1
lineage3.1 1
La1.8.1 1
lineage4.4.1.2 2
lineage4.8.2;lineage4.9 1
lineage1.2.1.2.1 1
lineage4.8.2 1
lineage3;lineage4.9 1
lineage3;lineage4 2
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 309
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11342636 MDR-TB lineage4.3.3 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR9971223 Other lineage2.2.1 None
ERR4818570 Other lineage4.3.3 None
SRR7070515 Other lineage1.1.3.1 None
SRR19303876 Other lineage4.7 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR6046020 Other lineage3 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR978693 Other lineage4.8 None
SRR5818612 Other lineage4.2.2.2 None
SRR6046616 Other lineage4.3.1.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR7070419 Other lineage3 None
SRR7069954 Other lineage1.2.2.2 None
SRR5818672 Other lineage1.2.2.2 None
ERR978767 RR-TB lineage4.8 None
ERR4829039 RR-TB lineage4.3.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR6046064 Other lineage3 gb
ERR10796577 Other lineage4.9 None
SRR6046848 Other lineage4.6.5 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR3675509 Other lineage4.9 None
SRR7069518 Other lineage4.8 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR6045705 Other lineage4.9 None
ERR2512423 Other lineage4.1.1.3 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6044904 Other lineage3 None
ERR978752 Other lineage4.8 None
SRR13423546 Other lineage4.4.2 None
SRR19303820 RR-TB lineage4.8 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18003023 Other lineage2.2.1 None
SRR7069027 MDR-TB lineage4.3.4.2 None
SRR15276982 XDR-TB lineage3 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR978746 RR-TB lineage4.8 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR7069839 Other lineage4.8 None
SRR7070461 Other lineage3 None
ERR2600609 Other lineage4.8 None
SRR6785281 Other lineage4.2.1.1 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR4817915 Other lineage4.9 None
SRR18002908 Other lineage2.2.1 None
DRR034348 Other lineage2.2.1 None
ERR867521 MDR-TB lineage2.2.1 None
SRR19241806 Sensitive lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
ERR2514173 Other lineage4.5 gb
SRR6046766 Other lineage3.1.1 None
ERR978733 RR-TB lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
ERR978755 RR-TB lineage4.8 None
ERR10796562 Other lineage4.3.4.1 None
SRR18002961 Other lineage2.2.1 None
SRR7069922 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR10796635 Other lineage4.8 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4820736 Sensitive lineage4.1.2.1 gb
SRR11342649 MDR-TB lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR7069319 Other lineage4.5 None
SRR6045664 Other lineage4.2.1 None
SRR18911555 Other lineage4.1.2.1 None
ERR4821325 Other lineage3 None
SRR9971372 MDR-TB lineage4.1.1.1 None
ERR10796583 Other lineage2.2.1 None
SRR3675565 Other lineage4 None
SRR6046291 Other lineage3 None
SRR18003019 Other lineage2.2.1 None
SRR7070080 Pre-XDR-TB lineage3 None
ERR978747 Other lineage4.8 None
ERR10796628 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
SRR18213721 Other lineage4.8 None
ERR10796626 Other lineage4.1.2.1 None
ERR10796599 Other lineage4.8 None
SRR3675552 Other lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SAMEA3501015 Other lineage4.8 None
ERR978757 RR-TB lineage4.8 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR7069082 Other lineage4.1.2.1 None
SRR6045267 RR-TB lineage4.8 None
SRR6046852 MDR-TB lineage3 None
DRR188816 Other lineage4.2.2 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR6045002 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR18213736 Other lineage3 None
SRR6044983 Other lineage3.1.1 None
ERR978727 Other lineage4.8 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SAMEA3450033 Other lineage4.8 None
SRR6045125 Other lineage1.1.2 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR7131287 Other lineage2.2.1.1 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
ERR10796578 Other lineage2.2.1 None
SRR7069137 Other lineage4.8 None
ERR867544 Other lineage4.9 None
SAMEA3501063 RR-TB lineage4.8 None
SRR6045516 Other lineage3.1.1 None
SRR7070087 Other lineage4.8.1 None
ERR9117788 Other lineage3 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR11342664 MDR-TB lineage2.2.2 None
SRR7069074 Other lineage3 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR18002967 HR-TB lineage2.2.1 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4821704 Other lineage4.3.3 None
ERR2514801 Other lineage1.1.3.2 gb
SRR6045422 Other lineage4.3.1.1 None
ERR2228910 Other lineage4.8 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR10796636 Other lineage4.1.2.1 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR10796598 Other lineage4.9 None
SRR11349153 RR-TB lineage4.1.1.1 None
SRR18003042 Other lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
ERR978734 RR-TB lineage4.8 None
SRR6045424 Other lineage1.1.2 None
ERR4820922 Other lineage4.1.2.1 gb
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR3675261 Other lineage1.2.1.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR10796580 Other lineage4 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR10796593 Other lineage4.3 None
ERR867571 Other lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR2027230 Other lineage4.2.2.2 None
SRR1735598 RR-TB lineage4.9 None
ERR978754 RR-TB lineage4.8 None
ERR978761 Other lineage4.8 None
ERR10796576 Sensitive lineage4.9 None
ERR2027250 Other lineage3.1.2 None
SAMEA3501052 RR-TB lineage4.8 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4817060 Other None
SAMEA3501065 RR-TB lineage4.8 None
SRR7070369 Other lineage1.2.2.2 None
ERR4819166 Other lineage3 gb
SRR22048536 Other lineage4.3.3 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR7131122 Other lineage2.2.1 None
ERR911929_ERR911930 Other lineage4.8 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR6044936 Other lineage4.6 None
ERR4822261 RR-TB lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR978756 Other lineage4.8 None
SRR6046815 Other lineage3 None
ERR4816800 Other lineage4.8 gb
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
ERR978694_ERR978693 Other lineage4.8 None
SRR11342669 Other lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
SAMEA3501073 RR-TB lineage4.8 None
SRR6046117 Other lineage4.9 None
SRR11342695 MDR-TB lineage4.8 None
ERR3806588 Other lineage6.1.3 None
ERR10796633 Other lineage4.3.4.2 None
SRR7069784 Other lineage1.2.2.2 None
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR11349172 RR-TB lineage4.3.2.1 None
ERR4817526 Other lineage4.4.1.1 gb
ERR867575 Other lineage4.9 None
SRR6398013 Sensitive lineage4.1.2 ca
SRR18911231 Sensitive lineage4.1.1.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR4816610 Other lineage4.3.3 None
ERR4819772 Other lineage1.1.3.1 None
SRR7070479 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
SRR7131152 MDR-TB lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR6046343 Other lineage2.2.1 None
ERR978762 Other lineage4.8 None
SRR18002976 Other lineage2.2.1 None
ERR4819002 HR-TB lineage4.8 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR6045778 Other lineage3.1 None
ERR5087596 Other La1.8.1 None
ERR978765 RR-TB lineage4.8 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR7070293 Other lineage4.8 None
ERR867526 MDR-TB lineage2.2.1 None
ERR10796565 Other lineage4.9 None
SRR7069193 Other lineage4.3.1.1 None
ERR911930 Other lineage4.8 None
ERR4822150 Other lineage4.8 gb
SRR19304057 Sensitive lineage4.4.1.2 None
SRR6044841 Other lineage4.9 None
ERR867572 Other lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR7069030 Other lineage3 None
ERR978751 Other lineage4.8 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR9117812 Other lineage4.3.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR2228900 Other lineage4.8 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR7069648 Other lineage4.6.2.2 None
ERR867538 Other lineage4.2.2.2 None
ERR2886463 Sensitive lineage2.2.1 None
SRR9971144 RR-TB lineage2.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
ERR911929 Other lineage4.8 None
SRR7069097 Other lineage3.1.2.1 None
ERR4819324 Other lineage4.8 gb
ERR978750 RR-TB lineage4.8 None
ERR4821214 Other lineage1.2.1.2.1 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR6045957 Other lineage4.9 None
ERR2514351 Sensitive lineage3 gb
ERR2229147 Other lineage4.8 None
SRR5007165 Other lineage3 None
SRR6046159 Other lineage4.8.2 None
ERR4816856 Other lineage4.1.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR978760 RR-TB lineage4.8 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR6153150 Other lineage3.1.1 None
SRR6397733 Other lineage4.4.1.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR14179705 Pre-XDR-TB lineage3 None
SRR7070320 Other lineage4.8 None
SRR7070223 HR-TB lineage3 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR978694 Other lineage4.8 None
SRR7070134 Other lineage3.1.1 None
SRR7069931 Other lineage4.2.2.2 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR4818180 Other lineage4.8 gb
SRR18002941 RR-TB lineage2.2.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR2229436 Other lineage4.8 None
SRR18002933 Other lineage2.2.1 None
ERR5162090 RR-TB lineage4.9 None
ERR4820833 Other lineage3;lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
ERR4818393 RR-TB lineage3;lineage4 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821119 Other lineage4.4.1.1 None
SRR18003038 Other lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR7069314 Other lineage3 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045603 Other lineage4.1.1.3 None
SRR3675230 Other lineage3;lineage4 None
ERR867573 Other lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR10315579 Other lineage2.2.1.1 None
ERR978735 Other lineage4.8 None
SRR7069800 Other lineage3.1.2.1 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
ERR978748 Other lineage4.8 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796563 Other lineage4.3.3 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR867554 Other lineage4.3.4.1 None