EBG00000313339 - n.977T>C


Drug resistance types
28 Sensitive 30 RR-TB 5 HR-TB 26 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 149 Other
lineage Counts
lineage Count
lineage4.3.1.1 3
lineage3 29
lineage4.8 17
lineage4.9 23
2
lineage4.1.1.3 7
lineage4.6.2.2 3
lineage4.2.1 2
lineage3.1.3 2
lineage4.1.2.1 19
lineage4.2.2.2 7
lineage3.1 2
lineage4.3.4.2.1 2
lineage1.2.2.2 4
lineage4 10
lineage3.1.1 8
lineage1.1.2 3
lineage2.2.1 30
lineage4.8.2 2
lineage3.1.2 2
lineage4.7 3
lineage1.1.3.3 1
lineage1.1.3.1 3
lineage4.4.1.1 8
lineage3.1.2.2 2
lineage4.6.5 1
lineage1.2.1.2.1 1
lineage6.3.1 1
lineage4.3.3 7
lineage2.2.1.1 2
lineage4.5 1
lineage4.4.2 1
lineage4.4.1.1.1 3
lineage4.9;lineage1.1 1
lineage4.3.4.1 4
lineage4.9;lineage4.3.4 1
lineage4.3.2 1
lineage4.3 1
lineage4.1.1 5
lineage4.3.4 2
lineage4.1.2 1
lineage4.3.2.1 2
lineage4.6.3 1
lineage4.6.1.2 1
lineage2.2.2 5
lineage4.4.1.2 1
lineage6 1
lineage5.1.4 1
lineage1.2.1.1 2
lineage4.6 2
La1.8.2 1
lineage5 1
lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 246
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045422 Other lineage4.3.1.1 None
ERR4820941 HR-TB lineage3 gb
ERR4822150 Other lineage4.8 gb
SRR6045432 Other lineage3 gb
SRR6045447 Other lineage3 gb
SRR6045485 Other lineage4.9 None
ERR4821214 RR-TB None
ERR4822085 Other lineage4.8 gb
ERR4821286 Other lineage4.8 None
SRR6045603 RR-TB lineage4.1.1.3 None
ERR4821761 Other lineage3 gb
SRR6045565 Other lineage4.6.2.2 None
SRR6045664 Other lineage4.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR5818648 Sensitive lineage4.2.2.2 dj
SRR6045705 Other lineage4.9 None
SRR6045743 Other lineage3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045778 Other lineage3.1 None
SRR5818622 Sensitive lineage4.2.2.2 None
SRR5818624 Sensitive lineage3 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818686 Sensitive lineage4.2.2.2 dj
SRR5818672 Other lineage1.2.2.2 None
SRR6045876 Other lineage3 gb
SRR6045859 Other lineage3 None
SRR6044817 Other lineage3 None
SRR6045894 Other lineage4.8 None
SRR6044784 MDR-TB lineage3 None
SRR6044841 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044904 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR6045957 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6045125 Other lineage1.1.2 None
SRR6045056 Other lineage2.2.1 gb
SRR6046159 Other lineage4.8.2 None
SRR6045159 Other lineage3.1.1 None
SRR6046173 Other lineage3 None
SRR6046177 Other lineage3.1.2 None
SRR6045248 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6045295 Other lineage4.7 None
SRR6046064 Other lineage3 gb
SRR6045312 Other lineage1.1.3.3 None
SRR6045321 Other lineage1.1.3.1 None
SRR6045424 Other lineage1.1.2 None
SRR6046246 Other lineage3 None
SRR6046291 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046273 Other lineage3.1.2 None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046447 Sensitive lineage4.8 gb
SRR6046521 Other lineage4.4.1.1 None
SRR6046508 Sensitive lineage3.1.2.2 gb
SRR6046766 Other lineage3.1.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046616 Other lineage4.3.1.1 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046679 Other lineage3 gb
SRR6046729 Other None
SRR6046852 MDR-TB lineage3 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6153166 Other lineage1.2.1.2.1 ca
SRR6046905 Other lineage3 gb
SRR6153150 Other lineage3.1.1 None
SRR6398010 Sensitive lineage4.2.1 ca
SRR7131004 Other lineage4.6.2.2 None
ERR502530 Other lineage6.3.1 gh
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131094 Other lineage4.3.3 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131122 Other lineage2.2.1 None
SRR9971330 Sensitive lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR8651617 Pre-XDR-TB lineage4.5 None
SRR9971088 RR-TB lineage2.2.1 None
SRR1735641 Sensitive lineage2.2.1 gb
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR9971144 RR-TB lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR10796558 Sensitive lineage4 None
ERR10796557 Other lineage4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796561 Other lineage4.3.2 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796578 Other lineage2.2.1 None
ERR10796583 Other lineage2.2.1 None
ERR10796586 Other lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796594 Other lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796611 Other lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR6197034 Other lineage4.9 None
ERR10796623 Other lineage4.1.1 None
ERR10796640 Other lineage4.1.2.1 None
ERR3957933 Sensitive lineage4.1.1.3 None
ERR4195594 Sensitive lineage4.1.2.1 None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR10796627 Other lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR10796632 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR9117725 Other lineage4.1.1 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117686 HR-TB lineage3.1.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117763 HR-TB lineage3 None
ERR9117740 Other lineage3.1.1 None
ERR9117788 Other lineage3 None
ERR9117781 Other lineage3.1.3 None
ERR9117841 Other lineage4.8.2 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117812 Other lineage4.3.1.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR9121670 Sensitive lineage4.1.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315641 MDR-TB lineage4.4.1.1.1 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR11342679 Other lineage4.6.3 None
SRR1062906 MDR-TB lineage4.6.1.2 None
SRR11349159 MDR-TB lineage2.2.2 None
SRR11349153 RR-TB lineage4.1.1 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1183080 RR-TB lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR1180252 Other lineage4.9 None
SRR1735591 Other lineage4.1.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR22048374 Sensitive lineage4.8 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003027 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18912070 Sensitive lineage4.8 None
SRR18913750 Other lineage2.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304115 Other lineage4.1.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002938 Sensitive lineage2.2.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR18213726 Other lineage3 None
SRR19304094 Other lineage6 None
SRR19304109 Other lineage4.8 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR3675474 Other lineage4.1.1 None
SRR22048392 Other lineage4.8 None
SRR3675491 Other lineage4.7 None
ERR4815777 Other lineage4.9 None
ERR4815684 Other lineage5.1.4 gb
SRR3675261 Other lineage1.2.1.1 None
SRR3675496 Other lineage4.1.1.3 gb
ERR4814623 Other lineage4.8 None
SRR3675230 RR-TB lineage3 None
ERR4814748 Other lineage4.8 None
SRR3675291 Sensitive lineage4.6 gb
ERR4814905 Other lineage4.8 gb
SAMEA3501073 RR-TB lineage4.8 None
ERR4815909 Other lineage4.8 None
SRR3675552 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027230 Other lineage4.2.2.2 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816133 Other La1.8.2 None
ERR4816967 RR-TB lineage5 None
SRR3675527 RR-TB lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
ERR4816300 Other lineage4.1.2.1 None
SAMN02585982 MDR-TB lineage4.3.3 None
ERR4816510 Other lineage4.1.2.1 None
ERR4816800 Other lineage4.8 gb
ERR4818897 Other lineage4.1.2.1 gb
ERR4818151 Other lineage2.2.1 gb
ERR2503359 Sensitive lineage4.1.2.1 fi
SRR5007165 MDR-TB lineage3 None
ERR3276170 Other lineage4.1.2.1 nl
SRR5007186 Other lineage4.6 None
SRR5007170 RR-TB lineage4.9 None
ERR4817619 Other lineage4.1.2.1 gb
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2513657 Other lineage1.2.2.2 gb
ERR4819491 Other lineage4.1.2.1 None
ERR4819414 Other lineage1.1.3.1 gb
ERR4819772 RR-TB lineage1.1.3.1 None
ERR2514389 Other lineage3 None
ERR4819699 HR-TB lineage4.6.2.2 gb
ERR4819622 Other lineage4.1.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4819784 Other lineage4.1.2.1 None
ERR2514840 Sensitive lineage3 gb