EBG00000313339 - n.977T>C
Drug resistance types
28 Sensitive
30 RR-TB
5 HR-TB
26 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
149 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.1.1 | 3 |
| lineage3 | 29 |
| lineage4.8 | 17 |
| lineage4.9 | 23 |
| 2 | |
| lineage4.1.1.3 | 7 |
| lineage4.6.2.2 | 3 |
| lineage4.2.1 | 2 |
| lineage3.1.3 | 2 |
| lineage4.1.2.1 | 19 |
| lineage4.2.2.2 | 7 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4 | 10 |
| lineage3.1.1 | 8 |
| lineage1.1.2 | 3 |
| lineage2.2.1 | 30 |
| lineage4.8.2 | 2 |
| lineage3.1.2 | 2 |
| lineage4.7 | 3 |
| lineage1.1.3.3 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.4.1.1 | 8 |
| lineage3.1.2.2 | 2 |
| lineage4.6.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 7 |
| lineage2.2.1.1 | 2 |
| lineage4.5 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1 | 5 |
| lineage4.3.4 | 2 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.2 | 5 |
| lineage4.4.1.2 | 1 |
| lineage6 | 1 |
| lineage5.1.4 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.6 | 2 |
| La1.8.2 | 1 |
| lineage5 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4822150 | Other | lineage4.8 | gb | SRR6045432 | Other | lineage3 | gb | SRR6045447 | Other | lineage3 | gb | SRR6045485 | Other | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4822085 | Other | lineage4.8 | gb | ERR4821286 | Other | lineage4.8 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821761 | Other | lineage3 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR5818648 | Sensitive | lineage4.2.2.2 | dj | SRR6045705 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5818624 | Sensitive | lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818686 | Sensitive | lineage4.2.2.2 | dj | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045876 | Other | lineage3 | gb | SRR6045859 | Other | lineage3 | None | SRR6044817 | Other | lineage3 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046173 | Other | lineage3 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045295 | Other | lineage4.7 | None | SRR6046064 | Other | lineage3 | gb | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046291 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6046766 | Other | lineage3.1.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046679 | Other | lineage3 | gb | SRR6046729 | Other | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR6046905 | Other | lineage3 | gb | SRR6153150 | Other | lineage3.1.1 | None | SRR6398010 | Sensitive | lineage4.2.1 | ca | SRR7131004 | Other | lineage4.6.2.2 | None | ERR502530 | Other | lineage6.3.1 | gh | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131094 | Other | lineage4.3.3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR9971330 | Sensitive | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796557 | Other | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796611 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR6197034 | Other | lineage4.9 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3957933 | Sensitive | lineage4.1.1.3 | None | ERR4195594 | Sensitive | lineage4.1.2.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117686 | HR-TB | lineage3.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9121670 | Sensitive | lineage4.1.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR1062906 | MDR-TB | lineage4.6.1.2 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349153 | RR-TB | lineage4.1.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1180252 | Other | lineage4.9 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR22048374 | Sensitive | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18912070 | Sensitive | lineage4.8 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002938 | Sensitive | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR19304094 | Other | lineage6 | None | SRR19304109 | Other | lineage4.8 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR3675474 | Other | lineage4.1.1 | None | SRR22048392 | Other | lineage4.8 | None | SRR3675491 | Other | lineage4.7 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815684 | Other | lineage5.1.4 | gb | SRR3675261 | Other | lineage1.2.1.1 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4814623 | Other | lineage4.8 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814905 | Other | lineage4.8 | gb | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818151 | Other | lineage2.2.1 | gb | ERR2503359 | Sensitive | lineage4.1.2.1 | fi | SRR5007165 | MDR-TB | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR5007186 | Other | lineage4.6 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514389 | Other | lineage3 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514840 | Sensitive | lineage3 | gb |
|---|
