EBG00000313339 - n.870T>C
Drug resistance types
20 Sensitive
28 RR-TB
12 HR-TB
41 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
128 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 9 |
| lineage4.8 | 17 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.1.1 | 3 |
| lineage4.1.2 | 6 |
| lineage4.7 | 3 |
| lineage4.2.2.2 | 7 |
| lineage2.2.1 | 45 |
| lineage6.1.2 | 2 |
| lineage1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.1 | 4 |
| lineage3 | 12 |
| lineage4.1.2.1 | 13 |
| lineage4.4.1.1 | 10 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.9 | 29 |
| lineage2.2.2 | 5 |
| lineage4.2.2 | 3 |
| lineage4.1.1.1 | 5 |
| lineage4.3.4.2.1 | 5 |
| lineage4.8.1 | 3 |
| lineage2.2.1.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage3.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage6.3.1 | 1 |
| lineage4.6.5 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.2.1 | 5 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.6.1.2 | 4 |
| 1 | |
| lineage4.1;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.2.1.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.5 | 3 |
| lineage4.4.2 | 1 |
| La1.3 | 1 |
| lineage4.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796628 | Other | lineage4.3.3 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR7070320 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4818988 | Other | lineage1.2.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1238558 | Other | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR2510804 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR4816464 | Other | lineage3 | None | ERR4818507 | Other | lineage4.1.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | SRR7585400 | MDR-TB | lineage3 | None | ERR3283008 | Other | lineage4.9 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4816458 | Other | lineage1.2.2.2 | None | SRR6045778 | Other | lineage3.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR4815118 | Other | lineage2.2.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR5818667 | Sensitive | lineage4.4.1.1 | dj | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR2514943 | Sensitive | lineage4.8 | gb | ERR867569 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069030 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2027230 | Other | lineage4.2.2.2 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR502517 | Other | lineage5.1.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867573 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4817060 | Other | None | ERR10796635 | Other | lineage4.8 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4819017 | Other | lineage3 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR176605 | HR-TB | lineage4.3.4.2.1 | mw | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818612 | Other | lineage4.2.2.2 | None | ERR4769436 | Other | La1.3 | None | ERR9117788 | Other | lineage3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796580 | Other | lineage4 | None | ERR10796593 | Other | lineage4.3 | None | SRR7069319 | Other | lineage4.5 | None | SRR6044904 | Other | lineage3 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR4820256 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796577 | Other | lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR2513223 | Sensitive | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR6044936 | Other | lineage4.6 | None | ERR2514173 | Other | lineage4.5 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None |
|---|
