EBG00000313339 - n.1992A>G
Drug resistance types
65 Sensitive
25 RR-TB
20 HR-TB
31 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.9 | 94 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4 | 3 |
| lineage1.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6.1.2 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 4 |
| La1.3 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.8 | 12 |
| lineage4.4.1.1.1 | 3 |
| lineage4.4.1.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.7 | 2 |
| lineage4.5 | 1 |
| La1.6 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.3.3 | 3 |
| lineage4.1.1.1 | 1 |
| lineage3 | 4 |
| La2 | 1 |
| lineage4.2.1 | 3 |
| lineage2;lineage4 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1140724 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR10796589 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR867572 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1184329 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4195222 | Sensitive | lineage4.8 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR363445 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR867573 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR1181256 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR349265 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR363502 | Other | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR4033549 | Other | lineage2.2.2 | None | ERR363447 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR373947 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR9786076 | Sensitive | lineage3 | None |
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