EBG00000313339 - n.1992A>G
Drug resistance types
120 Sensitive
42 RR-TB
41 HR-TB
48 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 69 |
| lineage4.9 | 113 |
| lineage4.8 | 23 |
| lineage4.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.2.1 | 3 |
| lineage2.2.1 | 36 |
| lineage4.6.2.2 | 2 |
| lineage3 | 8 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.6.5 | 1 |
| lineage2.1 | 1 |
| lineage4.1 | 2 |
| 13 | |
| lineage4.1.1.3 | 2 |
| La1.8.1 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.7 | 2 |
| lineage4.1.2 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage1.1.1.1 | 2 |
| lineage2.2.2 | 5 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 1 |
| La1.3 | 2 |
| lineage4.5 | 1 |
| lineage5.1.1 | 1 |
| lineage6 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage4.3.4;lineage4.3.3 | 1 |
| La2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4 | 1 |
| La1.7.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage3.1.2.1 | 2 |
| lineage5 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.3.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 367 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2517475 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4830005 | Sensitive | lineage4.6.2.2 | None | SRR6046376 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829873 | Sensitive | lineage4.4.1.1 | it | ERR4829337 | Other | lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR502943 | HR-TB | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR1063855 | Other | lineage4 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR349265 | Sensitive | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR3283021 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400345 | Other | lineage4 | None | ERR4627369 | Other | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4195222 | Sensitive | lineage4.8 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4798431 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9787336 | Other | lineage6 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140736 | RR-TB | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1183034 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12830370 | Sensitive | lineage4.3.4;lineage4.3.3 | None | SRR13180204 | Sensitive | lineage3 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR16157123 | Other | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469201 | Other | La1.7.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815778 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR8025483 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR1750908 | Sensitive | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR1750907 | RR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814948 | Sensitive | lineage3.1.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675292 | Sensitive | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4830769 | MDR-TB | lineage4.3.3 | ir | ERR4815919 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816800 | Other | lineage4.8 | gb | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2510694 | Pre-XDR-TB | lineage2.2.1 | it | ERR2512630 | Other | lineage4.8 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818212 | Sensitive | lineage4.6 | gb | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4819131 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819462 | Other | lineage4 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None |
|---|
