lineage | Count |
---|---|
lineage4.6.5 | 2 |
lineage4.8 | 5 |
lineage4.4.1.1 | 4 |
lineage4.9 | 28 |
lineage4.1.1.1 | 1 |
lineage2.2.1 | 19 |
lineage2.2.2 | 1 |
1 | |
lineage4.8.1 | 2 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.2.2.2 | 2 |
lineage4.3 | 1 |
lineage2.2;lineage4 | 1 |
lineage4.8.2 | 1 |
lineage4.1.2 | 2 |
lineage4.4 | 1 |
La1.2;La1.8.1 | 1 |
lineage4.5 | 1 |
lineage4.3.3 | 3 |
lineage4.4.2 | 1 |
lineage4.2.1 | 3 |
lineage4.1.1.3 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.4.1.1.1 | 2 |
lineage4.8.2;lineage4.9 | 1 |
La1.7.X-unk4 | 1 |
La1.4 | 1 |
La1.2 | 1 |
lineage3 | 1 |
lineage3.1.1 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 95 |
ID | Drug resistance | Lineage | Country iso2 | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR176741 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR6046250 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4817069 | RR-TB | None | SRR1140724 | Other | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR3675582 | Other | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR6044952 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None |
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