Rv1630 - c.561T>C


Drug resistance types
104 Sensitive 37 RR-TB 160 HR-TB 84 MDR-TB 14 Pre-XDR-TB 2 XDR-TB 246 Other
lineage Counts
lineage Count
La3;lineage4.9 17
lineage4.9 214
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 18
lineage2.2.1 32
lineage4.1.2.1 22
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.1.1.1 4
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage6.3 11
La3;lineage2.2.2 1
lineage4.8 10
La2;lineage4.9 2
lineage1.2.1.1 1
lineage4.3.2.1 2
M.canetti;lineage2.2 1
lineage1;lineage4.9 1
lineage2.2.2 2
lineage4.9;lineage9 3
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage4.1.1.3 3
lineage3 11
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.9 25
22
La1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
lineage5.2 2
lineage2.2.1;lineage3;lineage4 1
lineage4.1.2.1.1 1
lineage4.4.1.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage6.3 9
lineage2.1 5
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.9;lineage7 3
La1.2 2
lineage2;lineage4 1
lineage2.2.1.1 4
lineage4.2;lineage4.9 2
lineage2.2 4
La1.7;lineage4.9 11
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4 7
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
lineage4.3.4.1 3
lineage4.6.2.2 5
lineage4.9;lineage7 4
M.canetti;lineage4.9 1
lineage4.8;lineage4.9 2
La1.7.1 1
lineage4.7 2
lineage4.6.5 2
lineage1.1.2 3
lineage2.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage6.1.3 2
lineage4.6.1.2 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.8.1 4
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
lineage1.1.3.1 1
La3 1
La1;lineage4.1.2 1
lineage6.1.1 2
lineage3.1.2.1 1
lineage4.9.1 1
La1.4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage3.1.3 2
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage4.6.3;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.4.2.1 3
lineage4.2.2.2 2
lineage2.2;lineage4 1
lineage4.1.2 2
lineage2.2.1;lineage3 1
lineage4.1.1.2 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.3 2
La1.2.BCG;lineage4.9 1
lineage4.2.1 3
La1.7.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.4.1.2 2
lineage2.1;lineage6.3 2
La3;lineage4.8 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 3
lineage3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage1.1 1
La1.2.BCG 2
M.canetti;lineage2.1;lineage3 1
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;lineage1.1.2 1
lineage4.3.3;lineage4.3.4.1 1
La1.2.BCG;La1.8.1 1
lineage6.3.1 1
La3;lineage2.2.1 1
La2;lineage2.2 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage4.9 2
lineage4.1.2.1;lineage4.4.1 1
lineage1.1.1 1
lineage4.8.1 1
lineage3.1;lineage9 1
lineage2.2.1.2;lineage7 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4 1
M.canetti;lineage2.1;lineage4 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 647
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR1165628 Other La3;lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR10869071 MDR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR926160 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4798504 RR-TB lineage3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
SRR23961542 Other La1;lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3804169 HR-TB lineage4.1.3 None
SRR1172885 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4814976 Other lineage4.9 None
ERR4800341 Other lineage3 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4769493 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961549 Other La1.2 None
SRR6045892 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR10796636 Other lineage4.1.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR4817069 RR-TB None
SRR25827682 Other None
SRR28351339 MDR-TB lineage4 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR9971122 MDR-TB lineage4.8 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR181824 HR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR9786671 Other None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR16156804 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR18909918 Other lineage2.2.1.1 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR15368973 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787256 Other lineage6.1.3 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
SRR22424787 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR161037 Other lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6785263 Sensitive lineage2.2.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR28119777 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR176643 Other La3;lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4769452 Other lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR736834 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR9971112 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR473334 HR-TB lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4818536 Other lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR3675243 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4815752 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR29051093 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR926162 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736848 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR5341293 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR11465665 Other lineage4.1.1.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR16156188 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR5341461 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6511621 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR108471 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
ERR926154 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR702406 Other lineage2.1 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797193 HR-TB lineage1.1.2 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR5341467 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR369157 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR3675312 Sensitive lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR1180996 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR11252664 Other lineage2.2.1 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341387 Other lineage4.9 None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR28119752 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR369156 Sensitive lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
SRR1180226 HR-TB lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6044952 Other lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29050928 Other lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4798823 HR-TB lineage4 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816762 Sensitive lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28351584 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR10796565 Other lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4819357 Sensitive lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR736817 HR-TB lineage4.3.4 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR3797069 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR18003019 Other lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1791747 Other La1.8.1 None
SRR7496517 Other None
ERR4816322 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926157 Sensitive lineage4.9 None
ERR9786508 Sensitive lineage4.3.3;lineage4.3.4.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR400529 Other lineage3 None
ERR323066 Sensitive lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR978765 RR-TB lineage4.8 None
SRR6044875 Sensitive lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR369151 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1915479 Other La1.2.BCG None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045191 Sensitive lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1158918 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR137286 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675275 Other lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR10315556 Sensitive lineage2.2.1 None
ERR387051 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180440 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR1063896 Sensitive None
SRR1710057 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9787336 RR-TB lineage6.1.3 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9786627 Other lineage4.1.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3416776 Other lineage2.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341455 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None