EBG00000313339 - n.1020A>G
Drug resistance types
88 Sensitive
68 RR-TB
34 HR-TB
78 MDR-TB
35 Pre-XDR-TB
0 XDR-TB
301 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 118 |
| lineage2.2.1.1 | 8 |
| lineage4.1.2.1 | 23 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage2.2.1 | 95 |
| lineage4.8 | 76 |
| lineage3;lineage4.2.2.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.6 | 2 |
| lineage3 | 39 |
| lineage4.2.2.2 | 10 |
| 2 | |
| lineage5.2 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.2 | 9 |
| lineage4.3.4.2 | 6 |
| lineage3.1.1 | 10 |
| lineage1.2.2.2 | 4 |
| lineage4.1.1.1 | 7 |
| lineage4.3.3 | 19 |
| lineage5 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.2.2 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.2.1 | 9 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.1.1.3 | 9 |
| lineage4.7 | 6 |
| lineage1.1.3.1 | 5 |
| lineage4.4.1.1 | 9 |
| lineage2.2.2 | 6 |
| lineage4.1.3 | 3 |
| lineage2.2.2;lineage4 | 1 |
| lineage4 | 3 |
| lineage4.4 | 1 |
| lineage4.8.1 | 6 |
| lineage3.1.2.1 | 4 |
| lineage4.3.2 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 3 |
| lineage3.1.2.2 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.8.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.3.3;lineage4.9 | 2 |
| lineage4.3.4.1 | 7 |
| lineage4.6.5 | 1 |
| lineage4.4.2 | 3 |
| lineage1 | 1 |
| lineage6 | 3 |
| lineage4.3.1.1 | 4 |
| lineage4.6.2.2 | 5 |
| lineage5.1.3 | 1 |
| lineage4.3 | 4 |
| lineage4.4.1.1.1 | 6 |
| lineage1.1.1.1 | 1 |
| lineage1.1.2 | 4 |
| La2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.8.1 | 2 |
| lineage3.1.1;lineage4 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage3.1.3 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La1.6 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| La1.2.BCG | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 604 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR926165 | Sensitive | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR7069189 | HR-TB | lineage4.1.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4820151 | Other | lineage4.8 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR6044936 | Other | lineage4.6 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR10796565 | Other | lineage4.9 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | ERR1063896 | Sensitive | None | ERR502474 | RR-TB | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR7069255 | Other | lineage4.1.2 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR1049672 | Other | lineage3 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR7069013 | Other | lineage4.8 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR29093382 | MDR-TB | lineage2.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR867567 | RR-TB | lineage3 | None | SRR6044784 | Other | lineage3 | None | ERR978762 | Other | lineage4.8 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5007186 | Sensitive | lineage4.6 | None | ERR4816967 | Other | lineage5 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR978748 | Other | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR16156817 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR9117676 | Sensitive | lineage4.2.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817874 | Other | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR16089407 | Other | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR6046802 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | ERR751326 | Other | lineage4.9 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR1181250 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR7069137 | Other | lineage4.8 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2;lineage4 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342646 | HR-TB | lineage3 | None | ERR10796580 | Other | lineage4 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | ERR4819593 | Sensitive | lineage4.5 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR11465829 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | SRR6046815 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR1180252 | Other | lineage4.9 | None | ERR978756 | Other | lineage4.8 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046208 | Other | lineage4.8 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR18213721 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR6358979 | Other | lineage4.9 | None | SRR7070461 | Other | lineage3 | None | SRR7131123 | Other | lineage4.8 | None | ERR2600609 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR867555 | Other | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR9119120 | Other | lineage4.8 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4818126 | Other | lineage1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR3806588 | Other | lineage6 | None | ERR5908124 | Other | lineage4.8 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR911930 | Other | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR7069999 | Sensitive | lineage5.1.3 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR10796574 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR7069797 | Sensitive | lineage3 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR7070176 | Other | lineage3 | None | SRR7070266 | Other | lineage1.1.2 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR7070087 | Other | lineage4.8.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR9907785 | RR-TB | lineage4.3.2.1 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR9117788 | Other | lineage3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR6046376 | Other | lineage3 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7069671 | HR-TB | lineage3 | None | SRR7069839 | Other | lineage4.8 | None | ERR4821325 | Other | lineage3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR867544 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR19303805 | Sensitive | lineage4.8 | None | SRR7236177 | Other | La1.8.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR4816690 | Other | None | SRR19304109 | Sensitive | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR137286 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR9971222 | RR-TB | lineage2.2.1.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3675214 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | ERR10796571 | Other | lineage4.9 | None | SRR7069518 | Other | lineage4.8 | None | SRR7070320 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR7069675 | Other | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR736848 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR10796623 | Other | lineage4.1.1.1 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR5341366 | Sensitive | lineage4.9 | None | DRR184932 | Other | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR4814362 | Other | lineage4.8 | None | SRR7070293 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR7069030 | Other | lineage3 | None | ERR926163 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911555 | Other | lineage4.1.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070419 | Other | lineage3 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787362 | Sensitive | lineage6 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR7069319 | Other | lineage4.5 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4829337 | Sensitive | lineage4.8 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR3675256 | Other | lineage4.7 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7069074 | Other | lineage3 | None | ERR10796598 | Other | lineage4.9 | None | SRR7070181 | Other | lineage3 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR11465579 | Sensitive | lineage4.3.4.1 | None | ERR4816464 | Other | lineage3 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR6046729 | Other | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7070458 | Sensitive | lineage3 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6046020 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR10796553 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR10796566 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341469 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7070144 | Other | lineage4.8 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR5341387 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR7070256 | Other | lineage4.2.1 | None | ERR978694 | Other | lineage4.8 | None | ERR9811805 | MDR-TB | lineage4.8 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR3675491 | Other | lineage4.7 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR978747 | Other | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303985 | Sensitive | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR6044904 | Other | lineage3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046246 | Other | lineage3 | None | ERR926164 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR18003033 | Other | lineage2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR7070602 | Other | lineage4.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR1173281 | Other | lineage3 | None | ERR4797474 | Sensitive | lineage4.9 | None |
|---|
