EBG00000313339 - n.2117C>T
Drug resistance types
9 Sensitive
28 RR-TB
7 HR-TB
9 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
115 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 17 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.2.1 | 2 |
| lineage4.8.2 | 4 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 15 |
| lineage1.1.2 | 6 |
| lineage4.8 | 15 |
| lineage4.1.3 | 2 |
| lineage3.1.1 | 4 |
| lineage4 | 5 |
| lineage4.9 | 11 |
| lineage1.1.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1 | 2 |
| 4 | |
| lineage4.4.1.1 | 9 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 20 |
| lineage1.2.2.2 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.4.2 | 1 |
| lineage3.1.2 | 2 |
| lineage4.3.3 | 6 |
| lineage4.6 | 2 |
| lineage4.5 | 4 |
| lineage1 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage1.1.3 | 1 |
| lineage4.7 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 173 |
Geographic prevalence
Country level data for this variant is available for 33 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117763 | HR-TB | lineage3 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | ERR9117837 | Other | lineage4.8.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR9117841 | Other | lineage4.8.2 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814508 | Sensitive | lineage1.1.1.1 | gb | ERR4815684 | Other | lineage5.1.4 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4814681 | Other | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4814789 | Other | lineage3 | gb | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | ERR4816081 | Other | lineage4.8 | gb | ERR4816008 | Other | lineage1.1.3.3 | gb | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR2179815 | Sensitive | lineage4.4.2 | cn | ERR4816423 | Other | lineage3.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR2229284 | Sensitive | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR2513742 | Pre-XDR-TB | lineage4.8 | gb | ERR4816696 | Other | lineage3 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816699 | Other | lineage4.6 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR11050995 | Sensitive | lineage4.5 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817274 | Other | lineage4.9 | gb | ERR2513392 | Other | lineage4.3.2.1 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4818084 | Other | lineage3.1.1 | gb | ERR4818797 | Other | lineage4.5 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818145 | Other | lineage3 | gb | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818180 | Other | lineage4.8 | gb | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2512699 | Sensitive | lineage1.1.2 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818431 | Other | lineage1.1.2 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4817645 | Other | lineage4.8 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513919 | HR-TB | lineage4.6.2.2 | gb | ERR4819298 | Other | lineage4.1.2.1 | gb | ERR4820284 | Other | lineage4.9 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4820324 | Other | lineage4 | None | ERR2514035 | Other | lineage3.1.2 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819591 | RR-TB | lineage4.6.2.2 | gb | ERR4819555 | Other | lineage4.8 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4820464 | Other | lineage4.9 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820787 | Other | lineage3.1.1 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4820059 | Other | lineage3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2515007 | Other | lineage3 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820193 | Other | lineage3 | None | ERR4820649 | Other | lineage4.6.1.2 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR4821051 | Other | lineage1.2.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821953 | Other | lineage4.7 | gb | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821325 | Other | lineage3 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4822203 | Sensitive | lineage4.4.1.1 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6044957 | Other | lineage4.8.2 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796627 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None |
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