EBG00000313339 - n.2117C>T


Drug resistance types
4 Sensitive 27 RR-TB 6 HR-TB 8 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 94 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage4.3.2.1 1
lineage4.8 10
lineage1.1.2 4
lineage4.1.3 1
lineage4 5
lineage3.1.1 2
lineage4.9 10
lineage1.1.3.1 3
lineage4.1.1 2
4
lineage3 14
lineage4.4.1.1 8
lineage4.2.2.2 2
lineage4.1.2.1 16
lineage4.3.4.2 1
lineage3.1.2 2
lineage4.3.3 5
lineage4.6 2
lineage4.3.2 1
lineage4.5 3
lineage1 1
lineage6.3.1 1
lineage4;lineage3 1
lineage4.1.1.3.1 3
lineage4.3.4.2.1 5
lineage4.8.2 4
lineage4.3.4.1 2
lineage4.2.2 1
lineage1.2.1.2.1 2
lineage4.6.1.2 1
lineage1.2.2.2 1
lineage4.3.1.1 3
lineage1.1.3 1
lineage3.1 1
lineage4.1.1.3 1
lineage3.1.3 1
lineage4.1.2 1
lineage4.3.4 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 143
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18002981 Other lineage2.2.1 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815171 HR-TB lineage1.1.2 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4814312 Other lineage4 None
ERR4815334 Other lineage3.1.1 None
ERR4815777 Other lineage4.9 None
ERR4814362 Other lineage4.8 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814709 Other lineage4.1.1 None
ERR4814681 Other lineage2.2.1 None
ERR4814821 Other lineage2.2.1 None
SRR3675236 HR-TB None
ERR4815467 Other lineage3 None
ERR4814874 MDR-TB lineage1.1.2 None
ERR4814930 Other lineage4.4.1.1 None
ERR4816086 Other lineage4.2.2.2 None
ERR4815572 Other lineage4.1.2.1 None
ERR4814986 Other lineage4.3.4.2 None
ERR4815898 Other lineage3 None
ERR4817055 Other lineage4.1.2.1 None
ERR4816227 RR-TB lineage3 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816549 Other lineage2.2.1 None
ERR4817060 RR-TB None
ERR4816270 Other lineage4.1.2.1 None
ERR4816397 Other lineage1.1.2 None
ERR4816423 Other lineage3.1.2 None
ERR4816462 Other lineage4.1.2.1 None
ERR4816692 Other lineage4.1.2.1 None
ERR2229284 Sensitive lineage4.8 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816696 Other lineage3 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816699 Other lineage4.6 None
ERR4818407 Other lineage4.3.2 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR11050995 Sensitive lineage4.5 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816866 Other lineage2.2.1 None
ERR2513401 HR-TB lineage3 None
ERR4818797 Other lineage4.5 None
ERR2513223 Other lineage4.1.2.1 None
ERR4819002 HR-TB lineage4.8 None
ERR4818126 RR-TB lineage1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818440 Other lineage6.3.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4817569 Other lineage4.3.4.1 None
ERR4817584 MDR-TB lineage3 None
SRR5007168 RR-TB lineage4.9 None
ERR4817645 Other lineage4.8 None
ERR4819096 Other lineage4.4.1.1 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4820256 Other lineage2.2.1 None
ERR4820324 Other lineage4 None
ERR4820284 Other lineage4.9 None
ERR4820318 Other lineage4.2.2 None
ERR4820266 RR-TB lineage3 None
ERR2514035 Other lineage3.1.2 None
ERR2514073 Other lineage4.1.1.3.1 None
ERR4820408 Other lineage4.1.2.1 None
ERR4819533 Other lineage1.1.2 None
ERR4819555 Other lineage4.8 None
ERR4820742 Other lineage4.3.4.2.1 None
ERR4820369 Other lineage2.2.1 None
ERR2514552 Sensitive lineage3 None
ERR4819622 Other lineage4.1.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4820464 Other lineage4.9 None
ERR4820572 Other lineage1.2.1.2.1 None
ERR4819830 Other lineage2.2.1 None
ERR4819766 Other lineage4.4.1.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820829 Other lineage4.8 None
ERR2515007 Other lineage3 None
ERR4820059 Other lineage3 None
ERR4820193 Other lineage3 None
ERR4820649 Other lineage4.6.1.2 None
ERR4820107 RR-TB None
ERR4821051 Other lineage1.2.1.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4821796 Other lineage4.1.1 None
SRR6046096 Other lineage4.1.2.1 None
SRR6045422 Other lineage4.3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR4821119 Other lineage4.4.1.1 None
ERR4821264 Other lineage1.1.3 None
ERR4821214 RR-TB None
ERR4821325 Other lineage3 None
ERR4821372 Other lineage4.1.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045778 Other lineage3.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045613 Other lineage3.1.3 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6044957 Other lineage4.8.2 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046641 Other lineage4.8 None
SRR6367397 Other lineage4.1.2.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046852 MDR-TB lineage3 None
ERR10796563 Other lineage4.3.3 None
ERR4817526 Other lineage4.4.1.1 gb
ERR4818180 Other lineage4.8 gb
ERR10796564 Other lineage4.3.3 None
ERR10796586 Other lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796574 Other lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796575 RR-TB lineage4.9 None
ERR10796590 Other lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796626 Other lineage4.1.2 None
ERR10796617 Other lineage4.3.4.1 None
ERR10796628 Other lineage4.3.3 None
ERR10796627 Other lineage4 None
ERR9117841 Other lineage4.8.2 None
ERR10796635 Other lineage4 None
ERR2514173 Other lineage4.5 gb
ERR9117711 Other lineage4.3.4.2.1 None
ERR9117763 HR-TB lineage3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR9117837 Other lineage4.8.2 None
SRR10315579 Other lineage2.2.1.1 None