EBG00000313339 - n.2029C>G


Drug resistance types
4 Sensitive 14 RR-TB 6 HR-TB 24 MDR-TB 10 Pre-XDR-TB 1 XDR-TB 65 Other
lineage Counts
lineage Count
lineage4.1.1.3.1;lineage4.9 1
lineage2.2.1 27
lineage4.9 17
lineage4.4.1.1.1 3
lineage3 10
lineage4.1.1.3 1
lineage4.3.3 7
lineage3.1.1 3
lineage2.2.2 2
lineage4 1
lineage1.2.2.2 2
lineage6.1.3 1
lineage4.3.4.2 1
lineage4.1.1.1 5
lineage4.1.2.1 3
lineage4.2.1 2
lineage3;lineage4 1
lineage4.8 5
lineage3.1.2.1 3
lineage4.2.2.2 3
lineage4.1.2 2
lineage4.4.1.1 4
lineage1.1.2 2
lineage4.6.2.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.6 1
lineage1.2.1.1 2
lineage4.1.1.3.1 2
lineage4.1.3 1
lineage2.2.1.1 1
lineage4.2.2 2
lineage6.1.2 1
lineage3.1.2.1;lineage4.9 1
lineage4.8.1 1
lineage4.7 1
lineage4.3.4.1 1
lineage4.3.1.1 1
lineage3.1.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 124
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR3675509 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR18003024 RR-TB lineage2.2.1 None
ERR10796598 Other lineage4.9 None
SRR15276982 XDR-TB lineage3 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR6045957 Other lineage4.9 None
SRR18002908 Other lineage2.2.1 None
SRR1735598 RR-TB lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR7070223 HR-TB lineage3 None
SRR7070134 Other lineage3.1.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR3675565 Other lineage4 None
ERR9117827 Other lineage1.2.2.2 None
ERR3806588 Other lineage6.1.3 None
ERR10796633 Other lineage4.3.4.2 None
ERR3283043 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR3675230 Other lineage3;lineage4 None
ERR867573 Other lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR18213736 Other lineage3 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR10796559 Other lineage4.9 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796565 Other lineage4.9 None
ERR10796591 Other lineage4.9 None
SRR9971223 Other lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR14801652 HR-TB lineage4.3.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR7069137 Other lineage4.8 None
SRR6045516 Other lineage3.1.1 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR10796577 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18003042 Other lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR6045424 Other lineage1.1.2 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR867521 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR7070369 Other lineage1.2.2.2 None
SRR6046766 Other lineage3.1.1 None
SRR22048536 Other lineage4.3.3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6044936 Other lineage4.6 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR7070080 Pre-XDR-TB lineage3 None
SRR18002933 Other lineage2.2.1 None
SRR11342669 Other lineage4.8 None
ERR10796564 Other lineage4.3.3 None
SRR6046117 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR6046343 Other lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR10315579 Other lineage2.2.1.1 None
DRR188816 Other lineage4.2.2 None
SRR18002976 Other lineage2.2.1 None
SRR7069800 Other lineage3.1.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR867526 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6044841 Other lineage4.9 None
SRR6045125 Other lineage1.1.2 None
ERR10796594 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR18002967 HR-TB lineage2.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR11342638 MDR-TB lineage4.4.1.1.1 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
SRR6044904 Other lineage3 None
SRR18003023 Other lineage2.2.1 None
SRR7069097 Other lineage3.1.2.1 None
SRR3675261 Other lineage1.2.1.1 None
SRR5007165 Other lineage3 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR18002961 Other lineage2.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR9971372 MDR-TB lineage4.1.1.1 None
ERR10796628 Other lineage4.3.3 None
ERR867575 Other lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
ERR867554 Other lineage4.3.4.1 None
ERR867572 Other lineage4.9 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR10796596 Other lineage4.9 None
SRR6046616 Other lineage4.3.1.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR10796578 Other lineage2.2.1 None
ERR867544 Other lineage4.9 None
ERR9117788 Other lineage3 None
SRR11342664 MDR-TB lineage2.2.2 None