EBG00000313339 - n.2029C>G


Drug resistance types
20 Sensitive 34 RR-TB 12 HR-TB 21 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 147 Other
lineage Counts
lineage Count
lineage2.2.1 33
lineage4.3.3 10
lineage3 28
lineage4.9 28
lineage2.2.2 2
lineage4.2.2 2
lineage4.8 16
lineage4.1.1.3 4
lineage4.4.1.2 1
lineage6 2
lineage4.1.2.1 14
lineage4.9;lineage3.1.1 1
lineage4.6 4
lineage4.1 1
lineage1.2.1.1 2
lineage5 1
lineage4.6.2.2 5
lineage4.4.1.1 8
lineage4.3.4.2 1
lineage3.1 2
lineage4 13
lineage3.1.2.1 1
lineage4.5 1
lineage4.1.2 4
lineage4;lineage3 1
lineage4.3.2 2
lineage4.1.1.3.1 3
lineage4.8.2 2
lineage4.8.1 3
lineage1.1.2 7
lineage4.3.1.1 5
lineage6.1.3 1
lineage3.1.1 4
lineage4.2.2.2 5
lineage4.2.1 1
lineage4.1.1 4
lineage4.7 1
lineage1.1.1.1 1
2
lineage4.6.5 1
lineage2.2.1.1 2
lineage4.4.2 1
lineage4.9;lineage1.1 1
lineage4.3.4.1 4
lineage4.3 2
lineage4.3.4 2
lineage1.2.2.2 2
lineage3.1.3 1
lineage4.4.1.1.1 2
lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 245
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR15276982 Pre-XDR-TB lineage3 None
SRR1735596 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002961 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002987 Other lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18003049 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19303805 Other lineage4.8 None
SRR22048536 Other lineage4.3.3 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304094 Other lineage6 None
SRR19304115 Other lineage4.1.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR3675227 Other lineage4.9 None
SRR3675475 Other lineage4.1.1.3 None
ERR4815268 Other lineage4.8 None
SRR3675230 RR-TB lineage3 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4819579 HR-TB lineage4.3.3 None
SRR3675291 Sensitive lineage4.6 gb
ERR4815502 Other lineage4.1 None
ERR4814911 Other lineage4.3.3 None
SRR3675261 Other lineage1.2.1.1 None
ERR4816967 RR-TB lineage5 None
SRR3675454 Other lineage3 gb
ERR4815870 HR-TB lineage4.6.2.2 gb
ERR4815919 Other lineage4.8 None
SRR3675509 Other lineage4.9 None
ERR2027255 HR-TB lineage4.4.1.1 None
SRR3675527 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027232 Other lineage4.3.4.2 None
ERR2027290 RR-TB lineage3.1 None
ERR4816231 Other lineage4 None
ERR2027304 Sensitive lineage4.1.2.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816232 Other lineage4 None
SRR3675565 Other lineage3 None
ERR4818691 Other lineage4.8 None
ERR4816856 Other lineage4.1.2.1 None
ERR2513082 Other lineage4.1.2.1 gb
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4818050 Other lineage4.6.2.2 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818797 Other lineage4.5 None
SRR4035822 Sensitive lineage4.1.2 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818212 Sensitive lineage4.6 gb
SRR5007163 MDR-TB lineage4;lineage3 None
ERR4818407 Other lineage4.3.2 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2513296 Other lineage4.1.2.1 gb
SRR5007170 RR-TB lineage4.9 None
SRR5007186 Other lineage4.6 None
SRR5007165 MDR-TB lineage3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007169 RR-TB lineage4.8.2 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4819324 Other lineage4.8 gb
ERR4819096 Other lineage4.4.1.1 None
ERR4819131 Other lineage4 None
ERR4819166 Other lineage3 gb
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2514668 Other lineage4.8.1 gb
ERR4819546 HR-TB lineage3 None
ERR2514351 Sensitive lineage3 gb
ERR4819641 HR-TB lineage4.6.2.2 None
SRR6045424 Other lineage1.1.2 None
ERR4820151 RR-TB lineage4.8 None
SRR6045485 Other lineage4.9 None
SRR6045422 Other lineage4.3.1.1 None
ERR4821054 Other lineage3 None
SRR6045445 Other lineage4.3.1.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045496 Other lineage6.1.3 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045553 RR-TB lineage4.9 None
SRR5818572 Sensitive lineage4.2.2.2 None
ERR4821563 HR-TB lineage1.1.2 gb
SRR6045565 Other lineage4.6.2.2 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6046117 RR-TB lineage4.9 None
ERR4821286 Other lineage4.8 None
ERR4822114 Other lineage4.1.2.1 None
SRR6045664 Other lineage4.2.1 None
SRR6045705 Other lineage4.9 None
SRR6045778 Other lineage3.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045749 Other lineage4.1.1 gb
SRR6045743 Other lineage3 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818612 Other lineage4.2.2.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045957 Other lineage4.9 None
SRR6045859 Other lineage3 None
SRR6044857 Other lineage4.8.1 gb
SRR6044904 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6044841 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR6044991 Sensitive lineage4.8 gb
SRR6045178 Other lineage3 None
SRR6046020 Other lineage3 None
SRR6045986 Other lineage3 None
SRR6045125 Other lineage1.1.2 None
SRR6045267 RR-TB lineage4 None
SRR6046208 Other lineage4 None
SRR6046291 Other lineage3 None
SRR6046246 Other lineage3 None
SRR6045335 Other lineage4.1.2.1 None
SRR6046359 Other lineage4.7 None
ERR4829337 Other lineage4.8 None
SRR6046343 Other lineage2.2.1 None
SRR6046376 Other lineage3 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046457 Other lineage3 gb
SRR6046534 Other lineage1.1.2 None
SRR6046447 Sensitive lineage4.8 gb
SRR6046612 Other lineage1.1.1.1 None
SRR6046729 Other None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046679 Other lineage3 gb
SRR6046739 Other lineage1.1.2 None
SRR6046766 Other lineage3.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR6046852 MDR-TB lineage3 None
SRR6046905 Other lineage3 gb
SRR6398013 Other lineage4.1.2 ca
SRR7131121 Other lineage4.3.3 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
ERR2886463 Sensitive lineage2.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971223 Other lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR10796553 Other lineage4.9;lineage1.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR10796558 Sensitive lineage4 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796559 Other lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796563 Other lineage4.3.3 None
ERR10796576 RR-TB lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796574 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796573 Other lineage4.8 None
ERR10796575 RR-TB lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796577 RR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796578 Other lineage2.2.1 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796594 Other lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796583 Other lineage2.2.1 None
ERR10796592 Other lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796626 Other lineage4.1.2 None
ERR10796620 Other lineage4.1.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796628 Other lineage4.3.3 None
ERR10796627 Other lineage4 None
ERR10796630 HR-TB None
ERR10796631 Other lineage4.3.4 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR3283008 Other lineage4.9 None
ERR3283051 Other lineage4.9 None
ERR3283043 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR3806588 Other lineage6 None
ERR9117675 Other lineage4.8 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117740 Other lineage3.1.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117788 Other lineage3 None
ERR9117763 HR-TB lineage3 None
ERR9117781 Other lineage3.1.3 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117818 Sensitive lineage1.1.2 None
SRR10315556 Sensitive lineage2.2.1 None
ERR9117841 Other lineage4.8.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR11349178 MDR-TB lineage4.4.1.1.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342690 Sensitive lineage4.1.2.1 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR1183080 RR-TB lineage4.9 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1172816 MDR-TB lineage4.3.3 None