EBG00000313339 - n.2522C>T


Drug resistance types
28 Sensitive 48 RR-TB 22 HR-TB 42 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 292 Other
lineage Counts
lineage Count
La1.8.2 1
La1.2 3
lineage5.1.1 2
lineage4.3 1
lineage4.3.4.2.1 4
lineage3.1.1 9
lineage3 41
lineage2.2.1 61
lineage1.2.2.2 5
lineage4.4.1.1 13
lineage4.6.1.1 1
lineage4.6.1.2 6
lineage2.2.1.1 7
lineage4.8 36
lineage2.2.2 6
lineage4.1.1 4
lineage4.8.1 1
lineage4.3.3 17
lineage4.9 61
La1.7.1 2
La1.8.1 2
La2 1
lineage4.2.2.1 1
lineage4.1.1.3 3
lineage4.1.2.1 36
lineage4.9.1 1
lineage4.3.2.1 7
lineage1.2.1.2.1 1
lineage1.1.3 1
lineage1.1.2 7
lineage4.6.2.2 8
lineage1.2.2 1
lineage4.7 3
lineage4.4.2 2
lineage4.3.4.2 4
lineage4.1.3 1
lineage4.6.5 2
lineage4.1 3
lineage4.2.1 2
lineage5 2
lineage1.2.1.1 1
11
lineage4 12
lineage1.1.3.1 5
lineage4.8.2 2
lineage1.1.1 2
lineage1 2
lineage4.5 2
lineage3.1.2.1 1
lineage4.3.2 4
lineage6.3.1 1
lineage4.1.1.3.1 3
lineage4.3.4.1 4
lineage4;lineage3.1.2.1 1
lineage3.1.2 2
lineage4.9;lineage4.8 1
lineage6 2
lineage6.1.3 1
lineage4.3.1.1 3
lineage4.2.2.2 2
lineage3.1.2.2 2
lineage4;lineage3 1
lineage1.1.3.3 1
lineage4.2.1.1 2
lineage4.1.1.2 1
lineage2.2 1
lineage4.3.1 1
lineage4.1.2 2
lineage4.2.2 1
lineage1.1.1.1 1
lineage4.6 1
lineage4.3.4 2
La1.3 1
spoligotype Counts
spoligotype Count
None 448
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6149874 Other La1.8.2 None
ERR6201802 Other La1.2 None
ERR751345 Other lineage5.1.1 None
ERR6201843 Other La1.2 None
ERR6209443 Other La1.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117711 Other lineage4.3.4.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR9117788 Other lineage3 None
ERR983241 MDR-TB lineage2.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR1011488 Other lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315603 MDR-TB lineage4.8 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
SRR11349159 MDR-TB lineage2.2.2 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1172282 Other lineage4.9 None
SRR1173025 Other lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1184383 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR13861206 Other lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR13199746 Other La1.7.1 None
SRR1791940 Other La1.8.1 None
SRR13861372 Other lineage4.9 None
SRR13861627 Other lineage4.9 None
SRR13888750 Other La2 None
SRR16157123 Other lineage4.9 None
SRR16149126 MDR-TB lineage4.2.2.1 None
SRR1791909 Other La1.7.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002949 Sensitive lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18003027 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18213691 Other lineage4.8 None
SRR18213726 Other lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19303917 Other lineage2.2.1 None
SRR18911138 Other lineage3 None
SRR18911555 Other lineage4.1.2.1 None
SRR19303796 Other lineage4.3.3 None
SRR19303820 RR-TB lineage4.8 None
SRR2101643 Other lineage2.2.1 None
SRR25206863 MDR-TB lineage2.2.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101628 Other lineage4.3.2.1 None
SRR21728339 Other lineage3 None
SRR2101684 Other lineage2.2.1.1 None
SRR21676929 Other lineage1.2.1.2.1 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21711124 Other lineage1.1.3 None
SRR21675949 Other lineage4.3.3 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR21728710 Other lineage4.1.1.3 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815165 Other lineage4.1.2.1 None
ERR4815104 Other lineage4.8 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR4815268 Other lineage4.8 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4815613 Other lineage3 None
ERR4814341 Other lineage4.7 None
ERR4815301 Other lineage4.4.2 None
ERR4814415 Other lineage3.1.1 None
ERR4814362 Other lineage4.8 None
ERR4815777 Other lineage4.9 None
ERR4815779 Other lineage4.3.4.2 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4814584 Sensitive lineage4.4.2 None
ERR4814681 Other lineage2.2.1 None
ERR4814623 Other lineage4.8 None
ERR4815452 Other lineage4.3.3 None
ERR1665404 Pre-XDR-TB lineage2.2.1 None
ERR4815467 Other lineage3 None
ERR4814714 Other lineage3 None
SRR3675230 RR-TB lineage3 None
ERR4814748 Other lineage4.8 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
ERR4815502 Other lineage4.1 None
ERR4814763 Other lineage2.2.1 None
ERR4814911 Other lineage4.3.3 None
ERR4815517 Other lineage1.2.2.2 None
ERR4814896 Other lineage2.2.1.1 None
ERR4814952 Sensitive lineage3 None
ERR4814930 Other lineage4.4.1.1 None
ERR4816087 Other lineage4.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815910 Other lineage4.1.2.1 None
ERR4815919 Other lineage4.8 None
ERR4815963 Other lineage4.2.1 None
ERR2229033 Other lineage4.8 None
ERR4814986 Other lineage4.3.4.2 None
ERR4815005 Other lineage4.1.2.1 None
ERR4816928 HR-TB lineage1.2.2.2 None
ERR2228941 Other lineage4.8 None
ERR4816954 Other lineage4.1.2.1 None
ERR4815898 Other lineage3 None
ERR4816967 RR-TB lineage5 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816183 Other None
ERR4816227 RR-TB lineage3 None
ERR4817478 Other lineage3 None
ERR4816232 Other lineage4 None
ERR4817055 Other lineage4.1.2.1 None
ERR4816243 Sensitive lineage3 None
ERR4817060 RR-TB None
ERR4816270 Other lineage4.1.2.1 None
ERR4816464 Other lineage3 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR2041685 MDR-TB lineage2.2.1 None
ERR4816510 Other lineage4.1.2.1 None
ERR4817131 Pre-XDR-TB None
ERR2229234 RR-TB lineage4.8 None
ERR4817134 HR-TB lineage2.2.1 None
ERR2229233 Sensitive lineage4 None
ERR4817398 Other lineage3.1.1 None
ERR4816549 Other lineage2.2.1 None
ERR4816692 Other lineage4.1.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817189 Other lineage4.7 None
ERR2229358 Other lineage4.8 None
ERR4816690 Other None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816696 Other lineage3 None
ERR2229439 Other lineage4.8 None
ERR4817435 Other lineage1.1.3.1 None
SRR5818426 Other None
ERR4816804 Other lineage4.1 None
ERR4816818 Other lineage4.8.2 None
ERR4816831 Other lineage4.1.2.1 None
ERR4817703 Other lineage1.1.1 None
ERR4816856 Other lineage4.1.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4817665 Other lineage4.8 None
SRR4033483 HR-TB lineage4.3.2.1 None
ERR4817452 Other lineage4.8 None
ERR4816907 Other lineage1.1.1 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4818655 Other lineage4.3.3 None
ERR4818685 Other lineage4.6.2.2 None
ERR4817710 Other lineage1.1.2 None
ERR4817735 Other lineage4.8 None
ERR4817874 Other lineage3 None
ERR4818988 Other lineage1 None
ERR4817826 RR-TB lineage4.5 None
ERR4818691 Other lineage4.8 None
ERR4817887 Sensitive lineage4.1.2.1 None
ERR4818752 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4819007 Other lineage2.2.1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4819011 Other lineage3.1.2.1 None
ERR4819017 RR-TB lineage3 None
ERR4818064 Other lineage4.8 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818126 RR-TB lineage1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818190 Other lineage4.8 None
ERR4818173 Other lineage2.2.1 None
ERR4818176 Other lineage4.1.2.1 None
ERR2513231 RR-TB lineage4.3.4.2 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818407 Other lineage4.3.2 None
ERR4818548 Other lineage4.3.3 None
ERR4818440 Other lineage6.3.1 None
ERR4818449 Other lineage4.3.3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818556 Other lineage3 None
SRR5007168 RR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818570 Other lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4819133 Other lineage1.2.2.2 None
ERR4817584 MDR-TB lineage3 None
ERR4819096 Other lineage4.4.1.1 None
ERR4819191 Other lineage4.6.2.2 None
ERR4819140 Other lineage4.1.2.1 None
ERR4819192 Other lineage3 None
ERR4819217 Other lineage1.2.2.2 None
ERR4819198 Other lineage2.2.1 None
ERR4820720 Other lineage4.1.2.1 None
ERR4820256 Other lineage2.2.1 None
ERR2513830 RR-TB lineage4.8 None
ERR4820725 Other lineage4.1.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4819313 Other lineage3.1.1 None
ERR4820746 RR-TB lineage3 None
SRR5341417 Pre-XDR-TB lineage3 None
ERR4819456 Other lineage4.8 None
ERR4819491 Other lineage4.1.2.1 None
ERR4820369 Other lineage2.2.1 None
ERR2514261 Other lineage3 None
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR4820324 Other lineage4 None
ERR4819528 RR-TB lineage3 None
ERR4819525 Other lineage3 None
ERR4819550 Other lineage3 None
ERR4819533 Other lineage1.1.2 None
ERR4819555 Other lineage4.8 None
ERR4819615 Other lineage4.3.4.2.1 None
ERR4820404 Other lineage4.3.2 None
ERR4819593 Other lineage4.5 None
ERR4819636 Other lineage3.1.2 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819766 Other lineage4.4.1.1 None
ERR4820769 Other lineage4.8 None
ERR4819655 Other lineage4.8 None
ERR4820864 Other lineage4.9;lineage4.8 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819784 Other lineage4.1.2.1 None
ERR4820817 Other lineage4.1.2.1 None
ERR2515032 Other lineage3 None
ERR2514968 Other lineage4.3.3 None
ERR4820829 Other lineage4.8 None
ERR4819948 Other lineage4.4.1.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820833 HR-TB None
ERR4820107 RR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR4820959 Other lineage4.1.2.1 None
ERR4820161 Other lineage3 None
ERR4821769 Other lineage4.1.2.1 None
ERR4821775 Other lineage4 None
SRR6045424 Other lineage1.1.2 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4821011 Other lineage6 None
SRR6045496 Other lineage6.1.3 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045422 Other lineage4.3.1.1 None
ERR4821214 RR-TB None
SRR5526841 MDR-TB lineage2.2.1.1 None
SRR6046117 RR-TB lineage4.9 None
SRR6045516 Other lineage3.1.1 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821417 Other lineage1.1.3.1 None
ERR4821286 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4821360 Other lineage4.1.2.1 None
ERR4822043 Other lineage4.1.1 None
ERR4821409 Other lineage4.8 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821584 Other lineage4.8.2 None
ERR4822114 Other lineage4.1.2.1 None
ERR4821526 Other lineage4.3.2 None
ERR4821712 HR-TB None
ERR4821679 Other lineage4.3.3 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR5818395 Sensitive lineage4.9 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045664 Other lineage4.2.1 None
SRR5818391 Other lineage4.9 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR5818388 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR6045705 Other lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818434 Sensitive lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818466 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045957 Other lineage4.9 None
SRR6044784 MDR-TB lineage3 None
SRR6044904 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6044983 Other lineage3.1.1 None
SRR6045125 Other lineage1.1.2 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045036 Other lineage4;lineage3 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045159 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
SRR6046208 Other lineage4 None
SRR6045289 Other None
SRR6046616 Other lineage4.3.1.1 None
SRR6046246 Other lineage3 None
SRR6046273 Other lineage3.1.2 None
ERR2851371 Other lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046291 Other lineage3 None
SRR6046343 Other lineage2.2.1 None
ERR2851359 Other lineage4.9 None
SRR6046534 Other lineage1.1.2 None
SRR6046766 Other lineage3.1.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6397642 RR-TB None
SRR6046852 MDR-TB lineage3 None
SRR6397770 Other lineage4.7 None
SRR6397640 Other lineage4.2.1.1 None
SRR6397727 Other lineage4.2.1.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6982088 Other lineage4.1.1.2 None
SRR6856094 Other lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6982140 Other lineage2.2 None
SRR6982494 Other lineage2.2.2 None
SRR6981966 Other lineage2.2.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982383 Other lineage4.3.2.1 None
ERR502517 MDR-TB lineage5.1.1 None
SRR6982066 Other lineage4.3.2.1 None
SRR6982400 Other lineage2.2.1 None
ERR4815784 Other lineage2.2.1 gb
SRR8073606 Other La1.8.1 None
SRR7131018 Sensitive lineage4.3.1 None
SRR7131030 Other lineage4.1.2.1 None
SRR7131061 Other lineage2.2.1 None
SRR7131094 Other lineage4.3.3 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131150 Other lineage2.2.1 None
SRR7585400 MDR-TB lineage3 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9970980 Other lineage4.1.2 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971114 Other lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR4819166 Other lineage3 gb
SRR9217358 Sensitive lineage1.1.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR036215 Other lineage4.8 None
ERR11466514 Sensitive lineage4.3.4.1 None
DRR185000 Other lineage1.1.1.1 None
DRR185048 Other lineage2.2.1 None
ERR10796558 Sensitive lineage4 None
ERR4819324 Other lineage4.8 gb
ERR4820188 Other lineage3 gb
ERR10796565 RR-TB lineage4.9 None
ERR10796559 Other lineage4.9 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796561 Other lineage4.3.2 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796568 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796576 RR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796583 Other lineage2.2.1 None
ERR10796599 Other lineage4 None
ERR10796586 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796615 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796627 Other lineage4 None
ERR10796626 Other lineage4.1.2 None
ERR369151 Sensitive lineage4.9 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796636 Other lineage4.1.2.1 None
ERR117617 HR-TB lineage1.1.3.1 None
ERR11465833 Sensitive lineage4.3.2.1 None
ERR10796631 Other lineage4.3.4 None
ERR10796635 Other lineage4 None
ERR3283051 Other lineage4.9 None
ERR4132447 HR-TB lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR3806588 Other lineage6 None
ERR4769436 Other La1.3 None
ERR4769424 Sensitive lineage4.9 None
ERR4769429 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None