lineage | Count |
---|---|
lineage4.1.2.1 | 48 |
lineage3 | 52 |
lineage2.2.1 | 63 |
lineage4 | 12 |
lineage4.8 | 47 |
11 | |
lineage4.9 | 62 |
lineage4.6.1.2 | 6 |
lineage3.1.1 | 9 |
lineage4.3.3 | 17 |
lineage4.7 | 3 |
lineage4.1 | 4 |
lineage4.6.2.2 | 11 |
lineage1.1.3.1 | 6 |
lineage4.8.2 | 2 |
lineage4.3.2.1 | 6 |
lineage1.1.1 | 2 |
lineage2.2.2 | 5 |
lineage1.1.2 | 11 |
lineage1 | 2 |
lineage4.2.1.1 | 3 |
lineage4.1.1.3 | 4 |
lineage4.5 | 4 |
lineage3.1.2.1 | 1 |
lineage4.3.4.2 | 4 |
lineage4.4.1.1 | 13 |
lineage4.3.2 | 4 |
lineage6.3.1 | 1 |
lineage4.1.1.3.1 | 3 |
lineage4.1.1 | 6 |
lineage1.2.2.2 | 6 |
lineage4.3.4.1 | 3 |
lineage4;lineage3.1.2.1 | 1 |
lineage4.2.1 | 5 |
lineage4.3.4.2.1 | 4 |
lineage3.1.2 | 3 |
La1.8.1 | 3 |
lineage4.9;lineage4.8 | 1 |
lineage4.4.2 | 3 |
lineage1.2.1.1 | 2 |
lineage6 | 2 |
lineage4.3.1.1 | 3 |
lineage6.1.3 | 1 |
lineage2.2.1.1 | 7 |
lineage1.1.3.2 | 1 |
lineage5 | 2 |
lineage1.1.1.1 | 2 |
lineage4.2.2.2 | 2 |
lineage3.1.2.2 | 2 |
lineage4;lineage3 | 1 |
lineage1.1.3.3 | 1 |
lineage4.6.5 | 2 |
lineage4.1.1.2 | 1 |
lineage4.3.1 | 1 |
lineage2.2 | 1 |
lineage5.1.1 | 2 |
lineage4.1.2 | 2 |
lineage4.2.2 | 1 |
lineage4.6 | 1 |
lineage4.3.4 | 2 |
La1.3 | 1 |
La1.8.2 | 1 |
La1.2 | 3 |
lineage4.3 | 1 |
lineage4.6.1.1 | 1 |
lineage4.8.1 | 1 |
La2 | 1 |
La1.7.1 | 2 |
lineage4.2.2.1 | 1 |
lineage4.9.1 | 1 |
lineage1.1.3 | 1 |
lineage1.2.2 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.1.3 | 1 |
lineage3.1 | 1 |
lineage4.1.4 | 1 |
spoligotype | Count |
---|---|
None | 509 |
ID | Drug resistance | Lineage | Country iso2 | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4816243 | Sensitive | lineage3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816183 | Other | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816232 | Other | lineage4 | None | ERR4817478 | Other | lineage3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816464 | Other | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816690 | Other | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229358 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816691 | Other | lineage4.1.2.1 | gb | ERR4816696 | Other | lineage3 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4817426 | Other | lineage4.1 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817439 | Other | lineage4.6.2.2 | gb | ERR2229439 | Other | lineage4.8 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4816804 | Other | lineage4.1 | None | ERR4816818 | Other | lineage4.8.2 | None | ERR4817290 | Other | lineage3 | gb | ERR4816831 | Other | lineage4.1.2.1 | None | SRR5818426 | Other | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR4033483 | HR-TB | lineage4.3.2.1 | None | ERR4818655 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816907 | Other | lineage1.1.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817710 | Other | lineage1.1.2 | None | ERR4817452 | Other | lineage4.8 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4817735 | Other | lineage4.8 | None | ERR4818685 | Other | lineage4.6.2.2 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817972 | Other | lineage4.1.1.3 | gb | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817887 | Sensitive | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817874 | Other | lineage3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818752 | Other | lineage3 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818064 | Other | lineage4.8 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818918 | Other | lineage1.1.2 | gb | ERR4818190 | Other | lineage4.8 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818440 | Other | lineage6.3.1 | None | ERR4818449 | Other | lineage4.3.3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818538 | Other | lineage3 | gb | ERR4818556 | Other | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR2513298 | Other | lineage4.8 | gb | SRR5007168 | RR-TB | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2512841 | HR-TB | lineage2.2.1 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817563 | Other | lineage4.1.2.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819192 | Other | lineage3 | None | ERR4819133 | Other | lineage1.2.2.2 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2513912 | Other | lineage4.5 | gb | ERR4819313 | Other | lineage3.1.1 | None | ERR2513910 | Other | lineage3 | gb | ERR2513975 | Other | lineage3 | gb | ERR4820725 | Other | lineage4.1.2.1 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4820324 | Other | lineage4 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820369 | Other | lineage2.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819525 | Other | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR2514261 | Other | lineage3 | None | ERR4819561 | Sensitive | lineage4.1.2.1 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819550 | Other | lineage3 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820769 | Other | lineage4.8 | None | ERR4820424 | Other | La1.8.1 | gb | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819824 | Sensitive | lineage4.4.2 | gb | ERR4820891 | Other | lineage4.9 | gb | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820889 | Other | lineage3 | gb | ERR4819834 | Other | lineage4.8 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR2514949 | Sensitive | lineage3 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR4820833 | HR-TB | None | ERR4820829 | Other | lineage4.8 | None | ERR4820001 | Other | lineage4.8 | gb | ERR2515032 | Other | lineage3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4821775 | Other | lineage4 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820161 | Other | lineage3 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820107 | RR-TB | None | ERR4820188 | Other | lineage3 | gb | ERR4821812 | Other | lineage4.8 | gb | SRR6045424 | Other | lineage1.1.2 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821011 | Other | lineage6 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045455 | Sensitive | lineage4.1.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821214 | RR-TB | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4822021 | Other | lineage4.8 | gb | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4822043 | Other | lineage4.1.1 | None | ERR4821615 | Other | lineage4.8 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821584 | Other | lineage4.8.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821712 | HR-TB | None | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4821761 | Other | lineage3 | gb | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818434 | Sensitive | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044904 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6046246 | Other | lineage3 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045289 | Other | None | SRR6046534 | Other | lineage1.1.2 | None | ERR2851359 | Other | lineage4.9 | None | ERR2851371 | Other | lineage4.9 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR6046273 | Other | lineage3.1.2 | None | SRR6046291 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6397642 | RR-TB | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397770 | Other | lineage4.7 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR7131018 | Sensitive | lineage4.3.1 | None | SRR6982140 | Other | lineage2.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982275 | Other | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6982066 | Other | lineage4.3.2.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131094 | Other | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131150 | Other | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9217358 | Sensitive | lineage1.1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR10796558 | Sensitive | lineage4 | None | DRR185048 | Other | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR036215 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796627 | Other | lineage4 | None | ERR3283051 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR117617 | HR-TB | lineage1.1.3.1 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4132447 | HR-TB | lineage4 | None | ERR3806588 | Other | lineage6 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6201843 | Other | La1.2 | None | ERR6201802 | Other | La1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR6209443 | Other | La1.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117788 | Other | lineage3 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180252 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173025 | Other | lineage4.9 | None | SRR1172282 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1184383 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13199746 | Other | La1.7.1 | None | SRR13861372 | Other | lineage4.9 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR1791909 | Other | La1.7.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18213691 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18911138 | Other | lineage3 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2100189 | HR-TB | lineage1.1.3.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | ERR4815777 | Other | lineage4.9 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21728339 | Other | lineage3 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815613 | Other | lineage3 | None | ERR4814341 | Other | lineage4.7 | None | ERR4814362 | Other | lineage4.8 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815779 | Other | lineage4.3.4.2 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814415 | Other | lineage3.1.1 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4814681 | Other | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814714 | Other | lineage3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815053 | Other | lineage4.1.2.1 | gb | ERR4815837 | Other | lineage4.1.4 | gb | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR2228941 | Other | lineage4.8 | None | ERR4817309 | Other | lineage4.5 | gb | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815963 | Other | lineage4.2.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816087 | Other | lineage4.1.2.1 | None |
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