EBG00000313339 - n.2522C>T


Drug resistance types
21 Sensitive 20 RR-TB 13 HR-TB 27 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 117 Other
lineage Counts
lineage Count
lineage4.8 20
lineage4.1.2 2
lineage4.4.1.1 7
lineage2.2.2 4
lineage4.3.4.2.1 1
lineage2.2.1 36
lineage4.9 43
lineage3 10
lineage6.1.3 1
lineage4.1.1.1 5
lineage1.1.3.1 2
lineage4.3.3 9
lineage4.1.2.1 9
lineage4.3.4.1;lineage4.9 2
lineage4.3.2.1 2
lineage5.1.1 1
lineage4.1.1.3 4
lineage4.8.1 2
lineage4.7 1
La1.3 1
lineage5 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.3.4.1 1
lineage4.4.1.1.1 2
lineage4.2.2.2 3
lineage4.1.1.2 1
lineage4.6.2.2 2
lineage1.2.1.2.1 1
lineage4 1
lineage4.1 1
lineage1.2.2.2 2
lineage4.3.2 2
lineage3.1.2.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage1.2.1.1 1
lineage4.6.1.2 4
lineage3;lineage4.9 1
lineage4.3.4.2 1
lineage4.2.1.1 1
lineage4.2.1 2
lineage3;lineage4 1
lineage4.2.2 1
lineage4.1.2.1;lineage4.9 1
lineage3.1.2 1
lineage3.1.2.1 3
lineage4.3.1.1 1
La1.8.1 2
lineage3.1.1 1
lineage2.2.1.1 1
lineage1.2.2 1
lineage1.1.2 1
La2 1
spoligotype Counts
spoligotype Count
None 207
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR4033549 Other lineage2.2.2 None
ERR4818691 Other lineage4.8 None
SRR7069839 Other lineage4.8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4815784 Other lineage2.2.1 gb
SRR11342655 MDR-TB lineage2.2.1 None
SRR5818452 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1181403 Other lineage4.9 None
ERR4819948 Other lineage4.4.1.1 None
ERR10796635 Other lineage4.8 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR6046815 Other lineage3 None
ERR369157 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR10796599 Other lineage4.8 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1140724 Other lineage2.2.1 None
ERR3806588 Other lineage6.1.3 None
ERR4814763 Other lineage2.2.1 None
ERR867575 Other lineage4.9 None
ERR2229234 Sensitive lineage4.8 None
ERR10796620 Other lineage4.1.1.1 None
SRR18002976 Other lineage2.2.1 None
SRR5818399 Sensitive lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1049674 HR-TB lineage2.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR4820188 Other lineage3 gb
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4821769 Other lineage4.1.2.1 None
SRR10315567 HR-TB lineage2.2.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR751345 Other lineage5.1.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR5818432 MDR-TB lineage4.9 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR5818389 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
ERR4817189 Other lineage4.7 None
SRR5818404 Other lineage4.9 None
SRR5818411 RR-TB lineage4.9 None
ERR4769436 Other La1.3 None
SRR5818448 Other lineage4.9 None
SRR5818466 Other lineage4.9 None
ERR9117788 Other lineage3 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR4816967 Other lineage5 None
SRR18002967 HR-TB lineage2.2.1 None
ERR3276170 Other lineage4.1.2.1 nl
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR11466514 Sensitive lineage4.3.4.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR7069518 Other lineage4.8 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
SRR9971046 MDR-TB lineage4.8 None
ERR11465833 Sensitive lineage4.3.2.1 None
SRR5818459 Other lineage4.9 None
SRR6982088 Other lineage4.1.1.2 None
ERR10796598 Other lineage4.9 None
SRR18003023 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4819324 Other lineage4.8 gb
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4821214 Other lineage1.2.1.2.1 None
SRR7070461 Other lineage3 None
ERR2515032 Other lineage3 None
ERR4820324 Other lineage4 None
SRR1180446 Other lineage4.9 None
ERR4815502 Other lineage4.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR7070369 Other lineage1.2.2.2 None
ERR4818407 Other lineage4.3.2 None
ERR4819166 Other lineage3 gb
ERR4808964 RR-TB lineage2.2.1 None
ERR2228941 Other lineage4.8 None
ERR4815452 Other lineage4.3.3 None
SRR7068875 Other lineage3.1.2.2 None
SRR5818430 Sensitive lineage4.9 None
SRR25206863 MDR-TB lineage2.2.2 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4822261 RR-TB lineage2.2.1 None
SRR5818388 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
ERR10796561 Other lineage4.3.2 None
SRR7585400 MDR-TB lineage3 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
ERR369151 Other lineage4.9 None
ERR4819579 HR-TB lineage4.3.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR5818446 Other lineage4.9 None
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR6856094 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
ERR4820833 Other lineage3;lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
SRR3675552 Other lineage4.9 None
SRR6046117 Other lineage4.9 None
ERR10796633 Other lineage4.3.4.2 None
ERR4821119 Other lineage4.4.1.1 None
SRR6397640 Other lineage4.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR5818469 Other lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR4819191 Other lineage4.6.2.2 None
ERR4819772 Other lineage1.1.3.1 None
SRR5818449 MDR-TB lineage4.9 None
SRR6045603 Other lineage4.1.1.3 None
SRR3675230 Other lineage3;lineage4 None
ERR4818851 RR-TB lineage4.4.1.1 None
DRR188816 Other lineage4.2.2 None
SRR5818436 Sensitive lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR7070293 Other lineage4.8 None
SRR5818426 Other lineage4.9 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
ERR4818570 Other lineage4.3.3 None
SRR7131061 Other lineage2.2.1 None
ERR4819636 Other lineage3.1.2 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
ERR4821286 Other lineage4.8 None
ERR4819096 Other lineage4.4.1.1 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR4816831 Other lineage4.1.2.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6046616 Other lineage4.3.1.1 None
SRR5818391 Other lineage4.9 None
SRR7131030 Other lineage4.1.2.1 None
ERR867541 MDR-TB lineage4.2.1 None
ERR10796578 Other lineage2.2.1 None
SRR7069137 Other lineage4.8 None
ERR867544 Other lineage4.9 None
ERR4819198 Other lineage2.2.1 None
ERR4821704 Other lineage4.3.3 None
ERR978767 RR-TB lineage4.8 None
SRR7070458 Sensitive lineage3 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR8073606 Other La1.8.1 None
ERR4820410 RR-TB lineage3.1.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR5818408 Other lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR6045957 Other lineage4.9 None
SRR1791940 Other La1.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
ERR4816856 Other lineage4.1.2.1 None
ERR4820151 Other lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR5818400 Other lineage4.9 None
SRR7069347 Other lineage4.1.2.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR4819007 Other lineage2.2.1 None
SRR5818402 Other lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
ERR10796564 Other lineage4.3.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4816610 Other lineage4.3.3 None
ERR369161 Sensitive lineage4.9 None
ERR4820720 Other lineage4.1.2.1 None
SRR6046343 Other lineage2.2.1 None
SRR10315579 Other lineage2.2.1.1 None
ERR4819002 HR-TB lineage4.8 None
SRR7069800 Other lineage3.1.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR10796563 Other lineage4.3.3 None
ERR4818126 Other lineage1.2.2 None
ERR4819533 Other lineage1.1.2 None
SRR13888750 Other La2 None
ERR10796565 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR5818464 Other lineage4.9 None
SRR11342643 MDR-TB lineage4.1.1.1 None
SRR5818456 Other lineage4.9 None
SRR5818434 Sensitive lineage4.9 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None