EBG00000313339 - n.1467A>T
Drug resistance types
6 Sensitive
32 RR-TB
6 HR-TB
33 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 3 |
| lineage4.3.3 | 11 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4.9 | 32 |
| lineage4.6.1.2 | 5 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2.1 | 19 |
| lineage4.4.2 | 3 |
| lineage4.2.1 | 1 |
| La1.3 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 13 |
| lineage4.6.1.1 | 1 |
| La1.8.1 | 2 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 7 |
| lineage4.2.2 | 1 |
| lineage4.8.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage4.3.2.1 | 3 |
| lineage3 | 4 |
| lineage4.3.4.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.7 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 150 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR1202557 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1180446 | Other | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4820318 | Other | lineage4.2.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR10796591 | Other | lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR6356960 | RR-TB | lineage4.3.4.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4821704 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR5311077 | Other | La1.8.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR1184329 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1202523 | Sensitive | lineage4.9 | None | SRR1208470 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4820151 | Other | lineage4.8 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR10796571 | Other | lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4818691 | Other | lineage4.8 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1173770 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1208290 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None |
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