EBG00000313325 - n.845C>T
Drug resistance types
59 Sensitive
26 RR-TB
20 HR-TB
20 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
136 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.9 | 42 |
| lineage2.2.1 | 33 |
| lineage4.3.3 | 6 |
| lineage4.5 | 15 |
| lineage3 | 33 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 13 |
| lineage4.1.1.3 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4 | 13 |
| lineage1.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.2.1 | 2 |
| 5 | |
| lineage4.6 | 1 |
| lineage3.1.2.1 | 5 |
| lineage4.1.2.1 | 19 |
| lineage3.1.1 | 4 |
| lineage4.2.2.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.7 | 3 |
| lineage4.1.1 | 6 |
| lineage4.1.2 | 6 |
| lineage4.4.1.1 | 7 |
| lineage4.6.2.2 | 4 |
| lineage3.1.3 | 2 |
| lineage4.3.2 | 2 |
| lineage4.3.3;lineage3 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.6.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4 | 1 |
| La1.8.1 | 1 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| lineage6 | 1 |
| lineage6.1.1 | 1 |
| lineage1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 273 |
Geographic prevalence
Country level data for this variant is available for 63 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13986566 | Other | La1.7.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15316481 | Pre-XDR-TB | lineage4.5 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058250 | Sensitive | lineage4.5 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18054811 | MDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19303805 | Other | lineage4.8 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21277011 | HR-TB | lineage4 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SAMN02360605 | Sensitive | lineage4.5 | kr | ERR4814554 | Other | lineage4.1 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814714 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR176740 | HR-TB | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2027304 | Sensitive | lineage4.1.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815061 | Sensitive | lineage3 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816243 | Sensitive | lineage3 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR4817382 | Other | lineage4.9 | gb | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR2446509 | Other | lineage3 | nl | ERR4816476 | Other | lineage3.1.2.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR6280215 | Sensitive | lineage2.2.1 | cn | ERR4816628 | Other | lineage3 | None | ERR4816726 | Sensitive | lineage1.1.2 | gb | ERR4817221 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4817189 | Other | lineage4.7 | None | ERR4816703 | Sensitive | lineage4.5 | None | ERR4817276 | Other | lineage2.2.1 | None | SRR5818386 | Other | None | SRR5818426 | Other | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4817306 | Other | lineage3 | gb | ERR4818000 | Other | lineage3.1.1 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818104 | Other | lineage4.1.2 | gb | ERR2513160 | Pre-XDR-TB | lineage3 | gb | ERR4818831 | Other | lineage3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2512986 | Other | lineage3 | None | ERR4817907 | Other | lineage3 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818151 | Other | lineage2.2.1 | gb | ERR2513179 | Sensitive | lineage4.6.2.2 | gb | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR4818272 | Other | lineage4.3.2 | None | ERR2513508 | Sensitive | lineage3 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818530 | Other | lineage2.2.1 | gb | ERR4818545 | Other | lineage4.1.2 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818556 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4819166 | Other | lineage3 | gb | ERR2513682 | Sensitive | lineage3 | None | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | SRR5818458 | Other | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2513910 | Other | lineage3 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514261 | Other | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819518 | Other | lineage4.1.1 | None | ERR4820397 | Other | lineage4.9 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514279 | Other | lineage3 | gb | ERR4819613 | Sensitive | lineage4.3.1.1 | gb | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2514394 | Other | lineage4.3.4.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820891 | Other | lineage4.9 | gb | ERR4820777 | Other | lineage4.1.2.1 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4820478 | Other | lineage3.1.3 | None | ERR2514576 | Other | lineage4.8 | gb | ERR2514803 | Sensitive | lineage4.6.2 | gb | ERR2514613 | Other | lineage4.8 | gb | ERR4819842 | Other | lineage4.1.2.1 | None | ERR2514848 | HR-TB | lineage2.2.1 | gb | ERR4819921 | Other | lineage4.7 | None | ERR2514834 | Other | lineage4.7 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR2515032 | Other | lineage3 | None | ERR2515011 | Other | lineage4.1.2.1 | gb | ERR4821789 | Sensitive | lineage1.1.2 | None | ERR4820130 | Other | lineage3 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | ERR4820690 | Other | lineage4.1.1 | gb | ERR4820193 | Other | lineage3 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR2515077 | Sensitive | lineage3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4822034 | Other | lineage3.1.2.1 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR4821167 | Other | lineage4.8 | gb | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821572 | Other | lineage2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4822093 | Sensitive | lineage4.1.1 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822203 | Sensitive | lineage4.4.1.1 | gb | SRR5818391 | Other | lineage4.9 | None | ERR4821725 | Other | lineage4.8.2 | gb | ERR4821717 | Sensitive | lineage4.3.2.1 | gb | SRR5818394 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818469 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6044936 | Other | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4829261 | Other | lineage2.2.1 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4830525 | MDR-TB | lineage4.4.1.1.1 | za | ERR4829835 | HR-TB | lineage4.8 | it | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046447 | Sensitive | lineage4.8 | gb | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR671833 | Sensitive | lineage4.5 | cn | SRR671763 | Sensitive | lineage4.5 | cn | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6797760 | Sensitive | lineage2.2.1 | None | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR4831888 | HR-TB | lineage1.1.1.1 | vn | ERR3275190 | Other | lineage3 | nl | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796635 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3283009 | Other | La1.8.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR6338285 | Other | La1.2 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR3806588 | Other | lineage6 | None | ERR4811708 | HR-TB | lineage4 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117788 | Other | lineage3 | None | ERR9125901 | Sensitive | lineage4.5 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | SRR1013611 | HR-TB | lineage4 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013652 | Sensitive | lineage4.5 | None | SRR1013653 | Sensitive | lineage4.5 | None | SRR1049049 | Sensitive | lineage4.5 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049048 | Sensitive | lineage4.5 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR10809001 | Sensitive | lineage1.2.1 | None | SRR11342690 | Sensitive | lineage4.1.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None |
|---|
