EBG00000313325 - n.845C>T


Drug resistance types
44 Sensitive 26 RR-TB 15 HR-TB 18 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 106 Other
lineage Counts
lineage Count
lineage4.1.1.3 2
lineage4.2.1.1 1
lineage2.2.1 29
lineage4.4.1.1.1 1
lineage4.9 40
lineage4.2.2 1
lineage4.3.2 2
lineage4 13
lineage4.1.2.1 14
lineage4.3.3 6
lineage4.3.4.1 1
lineage4.3.4 1
lineage4.1.1 5
lineage4.1.2 4
La1.8.1 1
lineage6 1
La1.2 2
La1.3 1
lineage4.9;La1.3 1
lineage4.5 15
lineage4.8 6
lineage3 23
lineage4.3.2.1 2
lineage1.1.1.1 1
lineage6.1.1 1
lineage4.4.1.1 6
lineage1.2.1 1
lineage4.4.2 2
lineage4.9;lineage1.1 1
La1.7.1 1
lineage2.2.1.1 1
lineage4.4.1.2 1
lineage1.1.1 1
lineage4.2.1 2
lineage3.1.2.1 3
lineage4.1 1
5
lineage3.1.1 3
lineage4.7 3
lineage4.6.2.2 1
lineage4.1.1.3.1 1
lineage4.3.4.2 2
lineage3.1.3 1
lineage1.1.2 2
lineage1.2.2.2 1
lineage4.1.3 1
lineage1.1.3.1 1
lineage2.1 1
lineage4.3.4.2.1 1
lineage4.3.1 1
lineage4.3.1.1 1
spoligotype Counts
spoligotype Count
None 219
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR6785281 Other lineage4.2.1.1 None
SRR6797760 Sensitive lineage2.2.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR9971068 MDR-TB lineage4.4.1.1.1 None
SRR9971088 RR-TB lineage2.2.1 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR323061 Sensitive lineage4.9 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796561 Other lineage4.3.2 None
ERR10796558 Sensitive lineage4 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796559 Other lineage4.9 None
ERR10796563 Other lineage4.3.3 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796586 Other lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796583 Other lineage2.2.1 None
ERR10796565 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796599 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796623 Other lineage4.1.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796627 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796636 Other lineage4.1.2.1 None
ERR4820736 Sensitive lineage4.1.2.1 gb
ERR10796640 Other lineage4.1.2.1 None
ERR10796635 Other lineage4 None
ERR3797024 Other lineage4.9 None
ERR3283009 Other La1.8.1 None
ERR2514215 Other lineage2.2.1 gb
ERR3806588 Other lineage6 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769495 Other La1.3 None
ERR3797074 Sensitive lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR9125901 Sensitive lineage4.5 None
ERR4811708 HR-TB lineage4 None
ERR6338285 Other La1.2 None
ERR9117747 HR-TB lineage4.8 None
ERR9117788 Other lineage3 None
SRR10315696 Sensitive lineage4.3.2.1 None
ERR9786008 Sensitive lineage1.1.1.1 None
ERR9787164 Sensitive lineage6.1.1 None
SRR1013612 HR-TB lineage4 None
SRR1013652 Sensitive lineage4.5 None
SRR1013653 Sensitive lineage4.5 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR1013611 HR-TB lineage4 None
SRR1049049 Sensitive lineage4.5 None
SRR1048995 HR-TB lineage4.5 None
SRR1049048 Sensitive lineage4.5 None
SRR1048996 HR-TB lineage4.5 None
SRR10809001 Sensitive lineage1.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349180 MDR-TB lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR11342690 Sensitive lineage4.1.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR1175052 HR-TB lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR13986566 Other La1.7.1 None
SRR14782707 Other lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15316481 Pre-XDR-TB lineage4.5 None
SRR18002933 Other lineage2.2.1 None
SRR16058250 Sensitive lineage4.5 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002899 RR-TB lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18054811 MDR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18909918 Other lineage2.2.1.1 None
SRR18213736 MDR-TB lineage3 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304029 Other lineage4.8 None
SRR19303805 Other lineage4.8 None
SRR21277011 HR-TB lineage4 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR19304109 Other lineage4.8 None
SRR22048536 Other lineage4.3.3 None
SRR21658550 Other lineage1.1.1 None
SRR22424851 MDR-TB lineage4.3.3 None
ERR4815394 RR-TB lineage4.2.1 None
ERR176780 Sensitive lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR671763 Sensitive lineage4.5 cn
ERR4814714 Other lineage3 None
ERR4814554 Other lineage4.1 None
SRR3675230 RR-TB lineage3 None
SRR671833 Sensitive lineage4.5 cn
ERR176740 HR-TB None
ERR4815061 Sensitive lineage3 None
ERR4817464 Other lineage3.1.1 None
ERR212015 Sensitive lineage4.8 None
ERR2027304 Sensitive lineage4.1.2.1 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816243 Sensitive lineage3 None
ERR4816476 Other lineage3.1.2.1 None
ERR4817189 Other lineage4.7 None
ERR4817131 Pre-XDR-TB None
ERR216949 Sensitive lineage4 None
ERR4817398 Other lineage3.1.1 None
ERR4816628 Other lineage3 None
ERR4816703 Sensitive lineage4.5 None
SRR5818426 Other None
ERR4817276 Other lineage2.2.1 None
SRR5818386 Other None
ERR4818050 Other lineage4.6.2.2 None
ERR4816868 Other lineage4.4.1.1 None
ERR2512986 Other lineage3 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR3275190 Other lineage3 nl
ERR4818272 Other lineage4.3.2 None
ERR4818831 Other lineage3 None
ERR4818259 RR-TB lineage4.1.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR2512606 MDR-TB lineage3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4818556 Other lineage3 None
ERR2513682 Sensitive lineage3 None
SRR5818458 Other None
ERR4820266 RR-TB lineage3 None
ERR2513743 Other lineage4.1.2 None
ERR2513830 RR-TB lineage4.8 None
ERR4820746 RR-TB lineage3 None
ERR4819518 Other lineage4.1.1 None
ERR4820324 Other lineage4 None
ERR4819515 HR-TB lineage4.2.1 None
ERR4820397 Other lineage4.9 None
ERR2514261 Other lineage3 None
ERR4819528 RR-TB lineage3 None
ERR2514394 Other lineage4.3.4.2 None
ERR4819593 Other lineage4.5 None
SAMN02360605 Sensitive lineage4.5 kr
ERR4820777 Other lineage4.1.2.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819980 Other lineage4.1.2.1 None
ERR4820478 Other lineage3.1.3 None
ERR4819921 Other lineage4.7 None
ERR2514834 Other lineage4.7 None
ERR4819842 Other lineage4.1.2.1 None
ERR4821789 Sensitive lineage1.1.2 None
ERR4821769 Other lineage4.1.2.1 None
SAMN02360585 HR-TB lineage4.5 None
ERR2515032 Other lineage3 None
ERR4820130 Other lineage3 None
ERR4820193 Other lineage3 None
ERR4822093 Sensitive lineage4.1.1 None
ERR2446509 Other lineage3 nl
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR4822034 Other lineage3.1.2.1 None
ERR4821408 Sensitive lineage4.1.2 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4821488 Sensitive lineage4.1.3 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821492 HR-TB lineage3 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821572 Other lineage2.1 None
SRR5818394 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818391 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818441 Other lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818466 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818469 Other lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6044936 Other lineage4 None
SRR6046208 Other lineage4 None
SRR6045267 RR-TB lineage4 None
SRR6045424 Other lineage1.1.2 None
ERR4829261 Other lineage2.2.1 None
SRR6046250 Other lineage4.9 None
ERR2851359 Other lineage4.9 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6046616 Other lineage4.3.1.1 None
ERR4829816 RR-TB lineage4.4.1.1 None
SRR6046815 Other lineage3 None
ERR2886463 Sensitive lineage2.2.1 None