EBG00000313325 - n.845C>T
Drug resistance types
31 Sensitive
9 RR-TB
8 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 7 |
| lineage4.9 | 43 |
| lineage4.5 | 13 |
| La1.8.1 | 2 |
| lineage2.2.1 | 20 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.8 | 5 |
| lineage4.3.4.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3 | 7 |
| La1.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.3 | 5 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.4.1.1 | 4 |
| lineage3.1.2.1 | 2 |
| La1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.6 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.2.1 | 1 |
| lineage6.1.3 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 147 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR1049048 | Sensitive | lineage4.5 | None | SRR7236108 | Other | La1.8.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818507 | Other | lineage4.1.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5818400 | Other | lineage4.9 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SAMN02360605 | Sensitive | lineage4.5 | kr | ERR4822138 | Other | lineage4.1.2.1 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR18054811 | MDR-TB | lineage2.2.1 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR7069441 | Sensitive | lineage4.8 | None | SRR1013653 | Sensitive | lineage4.5 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR9125901 | Other | lineage4.5 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR5818404 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR16058250 | Other | lineage4.5 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR671763 | Sensitive | lineage4.5 | cn | ERR3797024 | Sensitive | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR5818414 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR10796635 | Other | lineage4.8 | None | SRR1013611 | Sensitive | lineage4.5 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR7070223 | HR-TB | lineage3 | None | SRR1049049 | Sensitive | lineage4.5 | None | SRR5818394 | Other | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR21277011 | HR-TB | lineage4.5 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR1048996 | Sensitive | lineage4.5 | None | ERR2446509 | Other | lineage3 | nl | ERR2851359 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5818426 | Other | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | SRR1013652 | Sensitive | lineage4.5 | None | SRR5818466 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796577 | Other | lineage4.9 | None | SRR5818437 | RR-TB | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR3283009 | Other | La1.8.1 | None | SRR5818458 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR6785281 | Other | lineage4.2.1.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR22048536 | Other | lineage4.3.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6044936 | Other | lineage4.6 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR7069931 | Other | lineage4.2.2.2 | None | SRR5818462 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR5818402 | Other | lineage4.9 | None | SRR1013612 | Sensitive | lineage4.5 | None | SRR7069391 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR10809001 | Sensitive | lineage1.2.1 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | DRR188816 | Other | lineage4.2.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR6046250 | Other | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR6338285 | Other | La1.2 | None | ERR1334032 | Other | lineage6.1.3 | None | ERR867572 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
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