EBG00000313339 - n.1246T>C
Drug resistance types
67 Sensitive
22 RR-TB
20 HR-TB
28 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
104 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 97 |
| lineage4.1.2.1 | 11 |
| lineage3.1.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.3 | 14 |
| lineage4.8.1 | 5 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.8 | 18 |
| lineage2.2.1 | 31 |
| lineage4.5 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1.1 | 5 |
| lineage6.3.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.7 | 3 |
| lineage4.2.2.2 | 2 |
| lineage3.1.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| La1.3 | 5 |
| lineage4.8.2 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage3 | 11 |
| lineage4.3.4.2 | 2 |
| lineage4.6.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.2 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 3 |
| lineage3.1.2 | 1 |
| lineage4.1.1.1 | 5 |
| lineage1.2.2.2 | 2 |
| lineage4 | 2 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| 1 | |
| lineage4.3.4.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 256 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180519 | Other | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181189 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR1183476 | Sensitive | lineage4.9 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4819593 | Sensitive | lineage4.5 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1183276 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR553231 | Other | lineage4.1.2.1 | None | ERR10796634 | Other | lineage4.7 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR4769408 | Other | La1.3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR1202405 | Sensitive | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR7645808 | HR-TB | lineage4.2.1;lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR7070293 | Other | lineage4.8 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4769495 | Other | La1.3 | None | ERR4816470 | HR-TB | lineage3 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR10796596 | Other | lineage4.9 | None | SRR1202605 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR1183179 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1208888 | Sensitive | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181221 | Other | lineage4.9 | None | SRR1183395 | Other | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769514 | Other | La1.3 | None | ERR736831 | Other | lineage4.9 | None | ERR4819166 | Other | lineage3 | gb | ERR4769555 | Sensitive | La1.3 | None | SRR1238557 | Other | lineage4.9 | None | SRR7070144 | Other | lineage4.8 | None | ERR4821761 | Other | lineage3 | gb | SRR18003023 | Other | lineage2.2.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181287 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR1462610 | Other | La2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR1183016 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7070388 | Other | lineage3.1.2 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR1181573 | Other | lineage4.9 | None | SRR1183718 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR1180091 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208488 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR6832659 | Other | lineage4.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR10796580 | Other | lineage4 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1183359 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769552 | Sensitive | La1.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR1208261 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1183485 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | ERR10796635 | Other | lineage4.8 | None | SRR1181143 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1208990 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4796577 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819007 | Other | lineage2.2.1 | None | ERR4820151 | Other | lineage4.8 | None | SRR11342680 | Other | lineage4.8 | None | ERR405190 | Sensitive | lineage4.9 | None | SRR1208660 | Sensitive | lineage4.9 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1183709 | Other | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1208850 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR2513259 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR867575 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR2229234 | Sensitive | lineage4.8 | None | SRR1208441 | Sensitive | lineage4.9 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR1182891 | Other | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR1208525 | Sensitive | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | SRR1208563 | Sensitive | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR4817189 | Other | lineage4.7 | None |
|---|
