EBG00000313339 - n.1246T>C


Drug resistance types
65 Sensitive 22 RR-TB 21 HR-TB 28 MDR-TB 14 Pre-XDR-TB 1 XDR-TB 105 Other
lineage Counts
lineage Count
lineage4.9 97
lineage4.8 18
lineage3.1.2.1 2
lineage4.1.1.3 1
lineage2.2.1 31
lineage4.5 1
lineage4.9.1 1
lineage4 2
lineage2.2.1;lineage4.9 2
lineage4.2.1;lineage4.8 1
lineage4.1.2.1 11
lineage1.2.1.1 1
lineage4.3.3 14
lineage4.4.1.1.1 5
lineage3 11
lineage4.3.4.2 2
lineage4.1.1.1 5
lineage4.2.1 3
lineage2.2.1;lineage4 1
lineage1.1.3.1 1
lineage4.4.1.1 3
La1;lineage4.9 1
lineage4.8.1 5
lineage5.1.1 1
lineage4.7 3
lineage4.1.1.3.1;lineage4.9 1
lineage4.8.2;lineage4.9 1
lineage3.1.1 2
lineage4.2.2.2 2
lineage4.1.2 2
1
lineage4.2.1.1;lineage4.3.3 1
lineage1.2.2.2 2
lineage3.1.2 1
lineage4.3.4.2.1 1
lineage6.3.1 1
lineage2.2.2 3
lineage2;lineage4.9 1
lineage4.6.2.2 1
La1.3 5
lineage4.3 1
lineage2.2.1;lineage2.2.2 1
lineage6.1.3 1
lineage4.8.2 1
lineage3;lineage4 1
La2 1
lineage4.1.2.1;lineage4.9 1
lineage4.3.4.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 256
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183179 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR7069097 Other lineage3.1.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
ERR4819593 Sensitive lineage4.5 None
ERR502470 RR-TB lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
ERR10796580 Other lineage4 None
SRR1183395 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1208488 Sensitive lineage4.9 None
SRR7645808 HR-TB lineage4.2.1;lineage4.8 None
ERR4816856 Other lineage4.1.2.1 None
SRR1183485 Other lineage4.9 None
ERR4815784 Other lineage2.2.1 gb
ERR10796576 Sensitive lineage4.9 None
ERR4820151 Other lineage4.8 None
ERR6359074 HR-TB lineage4.9 None
ERR4819011 Other lineage3.1.2.1 None
SRR1181368 Other lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR20632814 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4769493 Other lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046815 Other lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
SRR1183476 Sensitive lineage4.9 None
ERR10796583 Other lineage2.2.1 None
ERR9786076 Other lineage3 None
SRR18002933 Other lineage2.2.1 None
ERR10796564 Other lineage4.3.3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR553231 Other lineage4.1.2.1 None
ERR10796633 Other lineage4.3.4.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR176741 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1208441 Sensitive lineage4.9 None
ERR4820720 Other lineage4.1.2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR18002976 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR4819002 HR-TB lineage4.8 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR978765 RR-TB lineage4.8 None
ERR10796563 Other lineage4.3.3 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR6359066 HR-TB lineage4.9 None
ERR4818570 Other lineage4.3.3 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR502517 Other lineage5.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4817189 Other lineage4.7 None
ERR10796578 Other lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1208525 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4819198 Other lineage2.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR867567 RR-TB lineage3 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4820410 RR-TB lineage3.1.1 None
SRR1238557 Other lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
SRR1180519 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR4820075 Other lineage4.1.2.1 None
ERR10796598 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR6045191 Sensitive lineage4.9 None
SRR1181221 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1180410 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR7070144 Other lineage4.8 None
ERR4821761 Other lineage3 gb
ERR4796577 HR-TB None
SRR11342662 MDR-TB lineage4.8.1 None
ERR405190 Sensitive lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR7070320 Other lineage4.8 None
SRR1183276 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR1180375 Sensitive lineage4.9 None
ERR2513082 Other lineage4.1.2.1 gb
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR1180420 Sensitive lineage4.9 None
SRR6046291 Other lineage3 None
ERR10796628 Other lineage4.3.3 None
ERR9117827 Other lineage1.2.2.2 None
SRR1208850 Other lineage4.9 None
SRR1183016 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4821119 Other lineage4.4.1.1 None
SRR7070388 Other lineage3.1.2 None
ERR867575 Other lineage4.9 None
SRR1238559 Other lineage4.9 None
ERR2229234 Sensitive lineage4.8 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6045909 Other lineage4.8.1 None
SRR11342680 Other lineage4.8 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR11342682 Other lineage4.1.2 None
SRR1202405 Sensitive lineage4.9 None
ERR867574 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR3275709 HR-TB lineage3 nl
ERR4818624 Other lineage4.3.4.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR1181349 Sensitive lineage4 None
SRR7070293 Other lineage4.8 None
SRR6044983 Other lineage3.1.1 None
SRR1181283 Sensitive lineage4.9 None
ERR10796565 Other lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1172807 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SAMN02585982 MDR-TB lineage4.3.3 None
ERR4818440 Other lineage6.3.1 None
SRR6832659 Other lineage4.2.1 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR736816 Other lineage4.9 None
SRR1208563 Sensitive lineage4.9 None
ERR4821704 Other lineage4.3.3 None
ERR978767 RR-TB lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR1208660 Sensitive lineage4.9 None
SRR1208990 Sensitive lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR4769444 HR-TB lineage4.9 None
SRR1183709 Other lineage4.9 None
ERR987695 HR-TB lineage4.3.4.2 None
SRR18003023 Other lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
ERR4821679 Other lineage4.3.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR15276982 XDR-TB lineage3 None
SRR1181573 Other lineage4.9 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR2514351 Sensitive lineage3 gb
ERR10796593 Other lineage4.3 None
ERR473323 HR-TB lineage4.9 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
SRR18002908 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR1182891 Other lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR473334 HR-TB lineage4.9 None
SRR1208261 Sensitive lineage4.9 None
SRR1181189 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR7070369 Other lineage1.2.2.2 None
ERR4819166 Other lineage3 gb
SRR1180406 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR10796635 Other lineage4.8 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4819357 Sensitive lineage4.9 None
SRR7069347 Other lineage4.1.2.1 None
ERR405191 Sensitive lineage4.9 None
ERR4819007 Other lineage2.2.1 None
ERR6359070 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR1208888 Sensitive lineage4.9 None
ERR10796626 Other lineage4.1.2.1 None
SRR6046117 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR2513259 Other lineage3 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
SRR3675230 Other lineage3;lineage4 None
SRR1181287 Sensitive lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR1462610 Other La2 None
SRR10315751 MDR-TB lineage4.8 None
SRR1183718 Sensitive lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4769514 Other La1.3 None
SRR1180312 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR1180091 Other lineage4.9 None
ERR4816758 Other lineage4.8 gb
ERR4816470 HR-TB lineage3 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR18002981 Other lineage2.2.1 None
ERR4821286 Other lineage4.8 None
ERR867572 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
SRR4034391 MDR-TB lineage4.1.2.1 None
SRR1181214 Other lineage4.9 None
ERR4769495 Other La1.3 None
SRR1202605 Sensitive lineage4.9 None
SRR11342643 MDR-TB lineage4.1.1.1 None
SRR1175513 Sensitive lineage4.9 None
ERR405217 Sensitive lineage2.2.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR1183359 Other lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
SRR1181143 Other lineage4.9 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR1180444 Sensitive lineage4.9 None
ERR10796597 Other lineage4.3.3 None