EBG00000313339 - n.1054_1060delGGTGTAAinsTAGGTGT
Drug resistance types
6 Sensitive
5 RR-TB
1 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8.1 | 2 |
| lineage4.9 | 7 |
| lineage4.1.2 | 3 |
| lineage2.2.1 | 11 |
| lineage4.7 | 3 |
| lineage3;lineage4 | 1 |
| lineage3 | 7 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1 | 1 |
| lineage4.8 | 7 |
| lineage4.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796555 | Other | lineage4.1.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR3675491 | Other | lineage4.7 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR7070479 | Other | lineage4.1.2 | None | SRR6046246 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR7069319 | Other | lineage4.5 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7070458 | Sensitive | lineage3 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR5007165 | Other | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7070461 | Other | lineage3 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | SRR7070293 | Other | lineage4.8 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR3675256 | Other | lineage4.7 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796577 | Other | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR6046729 | Other | lineage3 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR7069097 | Other | lineage3.1.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR19304109 | Sensitive | lineage4.8 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None |
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