EBG00000313325 - n.847T>C


Drug resistance types
34 Sensitive 53 RR-TB 12 HR-TB 71 MDR-TB 24 Pre-XDR-TB 1 XDR-TB 222 Other
lineage Counts
lineage Count
lineage4.9 96
lineage4.3.4.1;lineage4.9 2
lineage4.3.4.2;lineage4.9 1
lineage4.8.2;lineage4.9 1
lineage2.2.2 7
lineage4.4.1.1.1 3
lineage3.1.1 5
lineage4.6.2.2 1
lineage4.2.2.2 3
lineage4.1.1.1 5
lineage2.2.1 77
lineage4.8 24
lineage4.1.2 5
lineage4.4.1.1 8
lineage4.1.1.3 5
lineage1.2.1.1 2
lineage4.9.1 1
lineage4 2
lineage1.2.1.2 1
lineage2.2.1;lineage2.2.2 1
lineage4.1.1.3.1 2
lineage4.7 6
1
lineage4.1.2.1 22
lineage4.3.3 15
lineage4.2.1 8
lineage3 24
lineage4.8.1 4
La1.6 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.6 1
lineage2.2.1;lineage4.8 1
lineage4.5 3
La1.8.1 4
lineage6.1.3 2
lineage2.2.1.1 7
lineage4.3.4.2 6
lineage4.3.4.1 6
lineage2.2.1;lineage4.9 1
lineage3;lineage4 2
lineage4.2.1.1 2
lineage4.3.4.2.1 4
lineage3.1.2.1 2
La2 1
lineage4.1.2.1;lineage4.9 2
lineage4.1.1.3.1;lineage4.9 1
lineage4.3.2.1 3
lineage1.1.3.3 1
lineage4.3.4;lineage4.9 1
M.canetti;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.3.2 2
lineage3.1.2.2 1
La1.3 1
lineage6.1.2 2
lineage4.3 2
lineage2.2;lineage4 1
lineage4.8.2 1
lineage4.1.3 1
lineage4.2.2 2
lineage4.4.2 2
lineage4.3.1.1 4
lineage3.1.2.1;lineage4.9 1
lineage1.1.2 1
lineage3.1.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.6.5 1
lineage4.4.1.2 1
lineage1.1.3.1 1
lineage4.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1 1
lineage3.1.3 1
lineage4.4 1
lineage1.2.2 1
spoligotype Counts
spoligotype Count
None 417
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675509 Other lineage4.9 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR5818458 Other lineage4.9 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR5818441 Other lineage4.9 None
SRR5007170 Other lineage4.9 None
SRR5818396 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4820410 RR-TB lineage3.1.1 None
SRR7069648 Other lineage4.6.2.2 None
ERR867538 Other lineage4.2.2.2 None
SRR11349189 MDR-TB lineage4.1.1.1 None
SRR10614047 Sensitive lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
ERR10796598 Other lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR18003033 Other lineage2.2.1 None
SRR3675261 Other lineage1.2.1.1 None
SRR18003040 MDR-TB lineage2.2.1 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
ERR10796580 Other lineage4 None
ERR867571 Other lineage4.9 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR5818452 Other lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR7070157 Other lineage4.1.1.3.1 None
SRR5818397 Other lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
ERR4821288 Other lineage4.7 None
ERR4817069 RR-TB None
ERR4024582 MDR-TB lineage4.1.2.1 None
SRR6044952 Other lineage4.9 None
SRR22048536 Other lineage4.3.3 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR5818470 Other lineage4.9 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR7070665 HR-TB lineage3 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR5818430 Sensitive lineage4.9 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10993951 RR-TB La1.6 None
ERR10796635 Other lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR6044936 Other lineage4.6 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4820736 Sensitive lineage4.1.2.1 gb
SRR5818388 Other lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR5818400 Other lineage4.9 None
SRR7070223 HR-TB lineage3 None
SRR5818395 Sensitive lineage4.9 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
SRR7069319 Other lineage4.5 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR5818446 Other lineage4.9 None
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR18002909 MDR-TB lineage2.2.1 None
ERR4586795 Other La1.8.1 None
ERR019855 Other lineage3 None
SRR5818402 Other lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR2513830 RR-TB lineage4.8 None
ERR4816184 Other lineage4.1.2.1 None
ERR10796564 Other lineage4.3.3 None
SRR16156804 Sensitive lineage4.9 None
SRR7131229 Other lineage4.1.2.1 None
SRR18213721 Other lineage4.8 None
ERR10796626 Other lineage4.1.2.1 None
ERR10796599 Other lineage4.8 None
DRR184629 Other lineage2.2.1 None
ERR10796554 Sensitive lineage4.1.2 None
ERR3806588 Other lineage6.1.3 None
SRR18909918 Other lineage2.2.1.1 None
SRR5818469 Other lineage4.9 None
ERR2984782 Pre-XDR-TB lineage4.3.3 None
ERR10219876 Other lineage4.3.4.2 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR6831991 Sensitive lineage4.2.1 None
SRR5818435 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR7069082 Other lineage4.1.2.1 None
SRR12062551 Pre-XDR-TB lineage2.2.1 None
ERR10796556 Other lineage4.3.4.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
SRR7070521 Other lineage4.2.1.1 None
ERR2513405 Other lineage2.2.1 None
SRR6046343 Other lineage2.2.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR7069800 Other lineage3.1.2.1 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR5818386 Other lineage4.9 None
SRR18002956 Other lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
SRR5818426 Other lineage4.9 None
SRR13888750 Other La2 None
ERR10796592 Other lineage4.9 None
SRR7069835 Other lineage2.2.1 None
ERR10796591 Other lineage4.9 None
SRR9971223 Other lineage2.2.1 None
SRR7645928 Other lineage4.7 None
SRR3675582 Other lineage4.9 None
SRR10380127 Other lineage4.3.3 None
SRR3675527 Other lineage4.9 None
SRR18003007 MDR-TB lineage4.5 None
ERR4796351 Sensitive lineage4.9 None
ERR10796595 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
SRR5818389 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR7069137 Other lineage4.8 None
SRR5818448 Other lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR18213726 Other lineage3 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR5818425 Other lineage4.9 None
ERR10796597 Other lineage4.3.3 None
SRR5818385 Other lineage4.9 None
ERR10796552 Sensitive lineage4.3.4.1 None
SRR5818427 HR-TB lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
SRR5818408 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
ERR10796553 Other lineage4.9 None
SRR7069027 MDR-TB lineage4.3.4.2 None
SRR5818409 Other lineage4.9 None
SRR18003032 Other lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR1173770 Other lineage4.9 None
SRR18002908 Other lineage2.2.1 None
ERR867521 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR1735598 RR-TB lineage4.9 None
ERR10796576 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR18714861 Sensitive lineage4.2.1 None
SRR18002987 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR6046729 Other lineage3 None
ERR017781 Other lineage3 None
SRR5818445 Other lineage4.9 None
SRR5818440 Other lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
SRR11349207 RR-TB lineage2.2.1 None
ERR4820746 Other lineage3 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR10796575 Other lineage4.3.4;lineage4.9 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR10796562 Other lineage4.3.4.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR6045178 Other lineage3 None
SRR6046246 Other lineage3 None
SRR18002961 Other lineage2.2.1 None
SRR7069922 Other lineage2.2.1 None
SRR7069347 Other lineage4.1.2.1 None
SRR7070134 Other lineage3.1.1 None
SRR5818422 Other lineage4.9 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR10796561 Other lineage4.3.2 None
SRR11349184 MDR-TB lineage2.2.1 None
SRR5818462 Other lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
ERR502481 RR-TB lineage4.9 None
SRR7131236 Other lineage4.3.4.2 None
SRR18002974 Other lineage2.2.1 None
SRR3675565 Other lineage4 None
SRR6046291 Other lineage3 None
ERR3797065 RR-TB lineage4.9 None
SRR7131147 Other lineage4.1.2.1 None
SRR18002933 Other lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
SRR5818429 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4828879 HR-TB lineage3 None
ERR4821119 Other lineage4.4.1.1 None
ERR10796581 Other lineage4.1.2 None
SRR6397640 Other lineage4.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR8774355 MDR-TB lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4769423 Other La1.3 None
ERR9787033 Sensitive lineage6.1.2 None
ERR3275941 RR-TB lineage4.3 nl
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR5007169 RR-TB lineage4.8.2 None
SRR7068923 Other lineage3 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR10315579 Other lineage2.2.1.1 None
DRR188816 Other lineage4.2.2 None
SRR5163959 Other lineage4.9 None
ERR2851359 Other lineage4.9 None
SRR18002976 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR5818399 Sensitive lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR7070293 Other lineage4.8 None
ERR867526 MDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
ERR10796565 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR6982141 Other lineage4.3.3 None
SRR5818410 Sensitive lineage4.9 None
SRR18003009 MDR-TB lineage2.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR7069193 Other lineage4.3.1.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR7131061 Other lineage2.2.1 None
ERR2514834 Sensitive lineage4.7 None
ERR502478 RR-TB lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR5818432 MDR-TB lineage4.9 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867555 Other lineage3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645899 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR6045125 Other lineage1.1.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
SRR7131182 Other lineage4.1.2.1 None
SRR6045071 Other lineage4.3.1.1 None
ERR10796596 Other lineage4.9 None
SRR7131287 Other lineage2.2.1.1 None
SRR1173740 Other lineage3;lineage4 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR6045496 Other lineage6.1.3 None
SRR5818464 Other lineage4.9 None
ERR10796617 Other lineage4.3.4.1 None
ERR5979407 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR5818456 Other lineage4.9 None
ERR10796582 Other lineage4.3.4.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR502474 RR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR10796560 Other lineage4.9 None
SRR5818424 Sensitive lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
ERR10796577 Other lineage4.9 None
SRR19303907 Other lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR6046848 Other lineage4.6.5 None
ERR867567 RR-TB lineage3 None
SRR1173170 Other lineage4.9 None
ERR2600422 MDR-TB lineage2.2.1 None
ERR3468488 Other La1.8.1 None
ERR10796636 Other lineage4.1.2.1 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR18002988 MDR-TB lineage2.2.1 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR5818459 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18002980 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR21728165 Other lineage1.1.3.1 None
ERR4819383 RR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR10796593 Other lineage4.3 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR4818507 Other lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR10796566 Other lineage4.9 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR4819863 RR-TB lineage4.9 None
SRR19303805 Sensitive lineage4.8 None
ERR10796632 Other lineage4.3.3 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR5818414 Other lineage4.9 None
SRR6045613 Other lineage3.1.3 None
SRR9971088 RR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR5818394 Other lineage4.9 None
SRR6046815 Other lineage3 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR7069957 Sensitive lineage4.1.2.1 None
ERR10796583 Other lineage2.2.1 None
SRR16156697 RR-TB lineage2.2.1 None
ERR3468613 Other La1.8.1 None
SRR11342669 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR3283046 Sensitive lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR10796633 Other lineage4.3.4.2 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR7131196 Other lineage4.8 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
ERR10796634 Other lineage4.7 None
SRR6046852 MDR-TB lineage3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR5818449 MDR-TB lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR10796571 Other lineage4.9 None
SRR18002937 Other lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR19304094 Other lineage6.1.2 None
SRR16627752 RR-TB lineage4.4 None
SRR5818423 RR-TB lineage4.9 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR7069441 Sensitive lineage4.8 None
SRR18002963 Other lineage2.2.1 None
ERR2229198 Sensitive lineage4.8 None
SRR18213736 Other lineage3 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796563 Other lineage4.3.3 None
ERR4818126 Other lineage1.2.2 None
ERR10796568 Other lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR867554 Other lineage4.3.4.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR19304104 Other lineage4.8 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR6044983 Other lineage3.1.1 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR502473 RR-TB lineage4.9 None
SRR5818413 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR19303876 Other lineage4.7 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR18002981 Other lineage2.2.1 None
ERR867572 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR6046020 Other lineage3 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
ERR4820030 Other lineage4.9 None
SRR6046616 Other lineage4.3.1.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR5818421 Sensitive lineage4.9 None
SRR5818391 Other lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
SRR5818460 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
ERR10796578 Other lineage2.2.1 None
SRR5818411 RR-TB lineage4.9 None
ERR867544 Other lineage4.9 None
SRR7070087 Other lineage4.8.1 None
SRR5818466 Other lineage4.9 None
ERR9117788 Other lineage3 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR4817826 Other lineage4.5 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR18002967 HR-TB lineage2.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR9117812 Other lineage4.3.1.1 None
SRR5818437 RR-TB lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None