Rv0667 - c.3081G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
7 Sensitive
26 RR-TB
4 HR-TB
27 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 9 |
| lineage4.3.4.2.1 | 4 |
| lineage4.9 | 17 |
| lineage3 | 5 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.3.3 | 4 |
| lineage4.3.4.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 3 |
| lineage2.2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.8 | 8 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.2 | 1 |
| La1.6 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| 1 | |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR2517457 | Sensitive | lineage3 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR1049724 | MDR-TB | lineage4.6.1.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR1049672 | Other | lineage3 | None | ERR037504 | Other | lineage4.9.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4817069 | RR-TB | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4817440 | Sensitive | lineage4.3.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None |
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