EBG00000313325 - n.668T>C


Drug resistance types
24 Sensitive 57 RR-TB 19 HR-TB 32 MDR-TB 23 Pre-XDR-TB 0 XDR-TB 265 Other
lineage Counts
lineage Count
lineage3 41
lineage4.3.3 17
lineage4.8 30
lineage2.2.1 55
lineage4.1 2
lineage4 15
lineage2.2.1.1 5
lineage4.1.2.1 38
lineage4.4.1.1 16
13
lineage4.9 49
lineage1.2.2.2 4
lineage3.1.1 10
lineage2.2 1
lineage1.2.1.1 1
lineage5 2
lineage4.2 1
lineage3.1.2 4
lineage1.1.3 2
lineage4.2.2.2 4
lineage3.1 1
lineage4.6.1.2 1
lineage3.1.2.1 2
lineage4.1.2 4
lineage1.1.1 1
lineage1 2
lineage2.2.2 2
lineage4.8.1 1
lineage4.6.2.2 6
lineage4.1.1 9
lineage4.2.2 2
lineage4.3.2 4
lineage4.1.1.3.1 5
lineage4.3.4.1 8
lineage1.2.1.2.1 2
lineage1.1.2 5
lineage4.3.4.2 3
lineage4.5 3
lineage1.1.3.1 2
lineage4.3.4.2.1 3
lineage4.7 6
lineage4.3.1.1 5
lineage4.1.1.3 4
lineage4.3.2.1 2
lineage2.1 1
lineage4.1.1.2 1
lineage4.2.1 2
La1.6 1
lineage4.8.2 1
lineage1.1.3.3 1
lineage4.3.1 1
lineage3.1.2.2 1
lineage1.1.1.1 1
lineage4.6.5 1
lineage4.4.1.1.1 1
lineage4.4.2 5
lineage4.9;lineage4.3.4 1
lineage4.3 2
lineage4.6 2
lineage4.3.4 1
lineage6 2
La2 1
lineage4.4.1.2 1
spoligotype Counts
spoligotype Count
None 420
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4814714 Other lineage3 None
SRR3675230 RR-TB lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814748 Other lineage4.8 None
ERR4814763 Other lineage2.2.1 None
ERR4815502 Other lineage4.1 None
SRR3675265 Other lineage4 None
ERR4815738 Other lineage3 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815572 Other lineage4.1.2.1 None
ERR4814911 Other lineage4.3.3 None
SRR3675288 Other lineage3 None
ERR4814930 Other lineage4.4.1.1 None
SAMEA3501073 RR-TB lineage4.8 None
SRR5818419 Sensitive None
SRR3675509 Other lineage4.9 None
ERR4816928 HR-TB lineage1.2.2.2 None
ERR4815849 Other lineage3.1.1 None
ERR4815901 Other lineage2.2 None
ERR4815898 Other lineage3 None
ERR4815910 Other lineage4.1.2.1 None
ERR4815919 Other lineage4.8 None
SRR3675510 Other None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816967 RR-TB lineage5 None
ERR4817464 Other lineage3.1.1 None
ERR4816043 Other lineage4.2 None
ERR2027250 Other lineage3.1.2 None
ERR4816093 Other lineage1.1.3 None
SRR3675538 Other lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027230 Other lineage4.2.2.2 None
ERR2027304 Sensitive lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816183 Other None
ERR4816510 Other lineage4.1.2.1 None
ERR4816184 Other lineage4.1.2.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4817478 Other lineage3 None
ERR4817060 RR-TB None
SRR3675565 Other lineage3 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816476 Other lineage3.1.2.1 None
ERR4816531 Other lineage4.1.2 None
ERR4817131 Pre-XDR-TB None
ERR2229234 RR-TB lineage4.8 None
ERR4817134 HR-TB lineage2.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816549 Other lineage2.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR4817175 Other lineage4.8 None
ERR4816907 Other lineage1.1.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816856 Other lineage4.1.2.1 None
SRR5818426 Other None
ERR4818691 Other lineage4.8 None
ERR4818988 Other lineage1 None
ERR4816425 Other lineage2.2.2 None
ERR2512986 Other lineage3 None
ERR4817853 Other lineage4.8.1 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818726 Other lineage4.1.2.1 None
ERR4818752 Other lineage3 None
ERR4818126 RR-TB lineage1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4818064 Other lineage4.8 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818173 Other lineage2.2.1 None
ERR4818176 Other lineage4.1.2.1 None
ERR4819078 Other lineage4.3.3 None
ERR4818190 Other lineage4.8 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4819087 Other lineage4.3.3 None
ERR4818265 Other lineage4.1.2.1 None
ERR4818351 Other lineage1.1.3 None
ERR4818274 Other lineage4 None
ERR4818296 Other lineage4.2.2 None
ERR2512606 MDR-TB lineage3 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818393 RR-TB lineage3 None
ERR4818407 Other lineage4.3.2 None
SRR5007165 MDR-TB lineage3 None
ERR3276155 Other lineage4.1.2.1 nl
ERR4818556 Other lineage3 None
ERR4818507 RR-TB lineage4.1.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818570 Other lineage4.3.3 None
SRR5007168 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007170 RR-TB lineage4.9 None
ERR4817555 RR-TB lineage3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4817645 Other lineage4.8 None
SRR5818458 Other None
ERR4819096 Other lineage4.4.1.1 None
ERR2513628 Other lineage4.1.2.1 None
ERR2513743 Other lineage4.1.2 None
ERR4819198 Other lineage2.2.1 None
ERR4820713 HR-TB lineage4.8 None
ERR4820266 RR-TB lineage3 None
ERR4820256 Other lineage2.2.1 None
ERR4819217 Other lineage1.2.2.2 None
ERR2513830 RR-TB lineage4.8 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819491 Other lineage4.1.2.1 None
ERR4819329 Sensitive lineage4.6.2.2 None
ERR4820324 Other lineage4 None
ERR4819456 Other lineage4.8 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819528 RR-TB lineage3 None
ERR4820369 Other lineage2.2.1 None
ERR4819518 Other lineage4.1.1 None
ERR4820746 RR-TB lineage3 None
ERR4819533 Other lineage1.1.2 None
ERR2514394 Other lineage4.3.4.2 None
ERR4819555 Other lineage4.8 None
ERR4819550 Other lineage3 None
ERR4820397 Other lineage4.9 None
ERR4819567 Other lineage2.2.1 None
ERR4819593 Other lineage4.5 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819636 Other lineage3.1.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4820771 Other lineage4.8 None
ERR4819784 Other lineage4.1.2.1 None
ERR4819766 Other lineage4.4.1.1 None
ERR4819765 Other lineage4.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR2514645 Other lineage4.3.4.1 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4819872 HR-TB lineage4.4.1.1 None
ERR2514834 Other lineage4.7 None
ERR4819948 Other lineage4.4.1.1 None
ERR2514692 Other None
ERR4819980 Other lineage4.1.2.1 None
ERR2515007 Other lineage3 None
ERR2515032 Other lineage3 None
ERR4820130 Other lineage3 None
ERR4820107 RR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR4820161 Other lineage3 None
ERR4821054 Other lineage3 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821796 Other lineage4.1.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR6045422 Other lineage4.3.1.1 None
ERR4821829 Other lineage1.1.2 None
SRR6046089 Other lineage4.1.2.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045485 Other lineage4.9 None
ERR4821887 Other lineage4.1.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6046117 RR-TB lineage4.9 None
SRR6045553 RR-TB lineage4.9 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR4821915 RR-TB lineage4.9 None
ERR4821891 Other lineage4.8 None
ERR4821214 RR-TB None
ERR4821222 Other lineage4.3.2.1 None
ERR4822043 Other lineage4.1.1 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821310 Other lineage5 None
ERR4821331 HR-TB lineage4.8 None
ERR4821572 Other lineage2.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4822176 Other lineage4.1.1.2 None
ERR4821610 Other lineage4.3.2 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821679 Other lineage4.3.3 None
SRR6045664 Other lineage4.2.1 None
ERR4821773 Other La1.6 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045618 Other lineage3.1.2 None
SRR6045655 Other lineage4.1.1.3.1 None
SRR5818395 Sensitive lineage4.9 None
SRR6045705 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818427 HR-TB lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818417 Sensitive lineage4.9 None
SRR5818413 HR-TB lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818428 Sensitive lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR6045743 Other lineage3 None
SRR5818460 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045849 Other lineage4.4.1.1 None
SRR6044784 MDR-TB lineage3 None
SRR6044817 Other lineage3 None
SRR6044841 Other lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044936 Other lineage4 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045957 Other lineage4.9 None
SRR6045125 Other lineage1.1.2 None
SRR6044983 Other lineage3.1.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6046159 Other lineage4.8.2 None
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6045289 Other None
SRR6045295 Other lineage4.7 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045379 Other None
SRR6045424 Other lineage1.1.2 None
SRR6046246 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
ERR4829039 RR-TB lineage4.3.1 None
ERR2851359 Other lineage4.9 None
ERR4829359 Other lineage4.7 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046517 Other lineage4.8 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046729 Other None
SRR6046616 Other lineage4.3.1.1 None
SRR6046612 Other lineage1.1.1.1 None
SRR6046641 Other lineage4.8 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046815 Other lineage3 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046766 Other lineage3.1.1 None
SRR6046848 Other lineage4.6.5 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6046852 MDR-TB lineage3 None
SRR6367397 Other lineage4.1.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR6785282 Other lineage4.3.3 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131030 Other lineage4.1.2.1 None
SRR7131094 Other lineage4.3.3 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131237 Other lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
SRR9971223 Other lineage2.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796558 Sensitive lineage4 None
ERR10796564 Other lineage4.3.3 None
ERR10796563 Other lineage4.3.3 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796568 Other lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796576 RR-TB lineage4.9 None
ERR10796574 Other lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796582 HR-TB lineage4.3 None
ERR10796580 RR-TB lineage4.6 None
ERR10796583 Other lineage2.2.1 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796586 Other lineage4.9 None
ERR10796588 Other lineage4 None
ERR10796596 Other lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796593 RR-TB lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796617 Other lineage4.3.4.1 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796615 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796620 Other lineage4.1.1 None
ERR10796623 Other lineage4.1.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796627 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796635 Other lineage4 None
ERR3806588 Other lineage6 None
ERR9117711 Other lineage4.3.4.2.1 None
ERR6197038 HR-TB lineage4.9 None
ERR9117704 Other lineage4.6 None
ERR6197022 Other lineage4.9 None
ERR9117740 Other lineage3.1.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117788 Other lineage3 None
ERR9117760 HR-TB lineage4.3 None
ERR9117763 HR-TB lineage3 None
ERR9117805 Other lineage4.3.2 None
ERR9117812 Other lineage4.3.1.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
ERR9117842 Sensitive lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR11342690 Sensitive lineage4.1.2.1 None
SRR10851741 Sensitive lineage4.3.4.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR1181161 Other lineage4.9 None
SRR11349180 MDR-TB lineage2.2.1 None
SRR1180252 Other lineage4.9 None
SRR13888750 Other La2 None
SRR1181250 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002985 HR-TB lineage2.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR18213726 Other lineage3 None
SRR18213736 MDR-TB lineage3 None
SRR18913779 Other lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19303773 Other lineage4.6.2.2 None
SRR19303820 RR-TB lineage4.8 None
SRR19303796 Other lineage4.3.3 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303815 Other lineage4.8 None
SRR19303907 Other lineage4.8 None
SRR19303949 Other lineage4.3.3 None
SRR19303985 Other lineage4.8 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19304094 Other lineage6 None
SRR19304109 Other lineage4.8 None
SRR19304095 Other lineage4.1.2.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR22048536 Other lineage4.3.3 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR21595825 Other lineage1.2.1.2.1 None
SRR21595935 Other lineage2.2.1 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4815104 Other lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR22424910 HR-TB lineage4.5 None
ERR4815172 Other lineage1.2.2.2 None
ERR4815613 Other lineage3 None
ERR4815193 MDR-TB lineage4.8 None
SRR3675474 Other lineage4.1.1 None
ERR4815301 Other lineage4.4.2 None
ERR4815281 Other lineage4.4.2 None
ERR4815298 Other lineage4.3.4.2.1 None
ERR4815777 Other lineage4.9 None
ERR4814312 Other lineage4 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR4815698 RR-TB lineage4.7 None
ERR4815334 Other lineage3.1.1 None
SRR6046646 Other lineage4.7 gb
ERR4815394 RR-TB lineage4.2.1 None
ERR4814617 Other lineage1.1.3.1 None