EBG00000313325 - n.668T>C
Drug resistance types
17 Sensitive
23 RR-TB
5 HR-TB
29 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
125 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 33 |
| lineage3.1.2.1 | 4 |
| lineage4.8 | 19 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 37 |
| lineage3 | 16 |
| lineage4.3.3 | 11 |
| lineage4.4.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4.1.1.1 | 6 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.4.1 | 3 |
| La2 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.7 | 3 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.1.1 | 2 |
| lineage2.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4 | 2 |
| lineage6.1.3 | 1 |
| lineage6.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5818411 | RR-TB | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR7070553 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6046020 | Other | lineage3 | None | SRR13888750 | Other | La2 | None | SRR18002945 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR6046646 | Other | lineage4.7 | gb | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4821679 | Other | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR4818507 | Other | lineage4.1.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR867544 | Other | lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR6044936 | Other | lineage4.6 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR6046815 | Other | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR18213721 | Other | lineage4.8 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR867575 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR867574 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR5818460 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | ERR10796623 | Other | lineage4.1.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR7069082 | Other | lineage4.1.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR7069030 | Other | lineage3 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR9117788 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR5818427 | HR-TB | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR10796635 | Other | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR7069839 | Other | lineage4.8 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR7069675 | Other | lineage3 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR7070329 | Other | lineage3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR18213726 | Other | lineage3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR19303815 | Other | lineage4.8 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069074 | Other | lineage3 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18913779 | Sensitive | lineage3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR5007170 | Other | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None |
|---|
