EBG00000313339 - n.1001A>G
Drug resistance types
17 Sensitive
39 RR-TB
16 HR-TB
15 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
163 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 5 |
| lineage4.8 | 23 |
| lineage4.7 | 4 |
| lineage3 | 24 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 8 |
| lineage4.1.3 | 3 |
| lineage4.9 | 17 |
| lineage4.1.1.3 | 3 |
| lineage3.1.1 | 6 |
| lineage4.1.2.1 | 30 |
| lineage4.3.4.2.1 | 5 |
| lineage2.2.1 | 25 |
| lineage1.2.2.2 | 3 |
| lineage4.4.1.1 | 7 |
| lineage4.6 | 3 |
| lineage4.3.4.2 | 2 |
| lineage1.1.3 | 1 |
| lineage2.2 | 1 |
| lineage4.3.3 | 10 |
| lineage4.2.1 | 1 |
| lineage4 | 8 |
| 4 | |
| lineage4.1.2 | 3 |
| lineage3.1.2 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 4 |
| lineage1 | 2 |
| lineage4.2.2.2 | 4 |
| lineage4.8.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.1.1 | 4 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 4 |
| lineage4.1.1.3.1 | 5 |
| lineage4.8.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.2.2 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.9;lineage4.8 | 1 |
| lineage3.1.3 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage5 | 1 |
| lineage3.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage3.1.2.2 | 2 |
| lineage4.9;lineage3 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 256 |
Geographic prevalence
Country level data for this variant is available for 51 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4814341 | Other | lineage4.7 | None | ERR4815613 | Other | lineage3 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR4815618 | Other | lineage4.8 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815646 | Sensitive | lineage4.9 | None | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR4815334 | Other | lineage3.1.1 | None | ERR4814415 | Other | lineage3.1.1 | None | ERR4815467 | Other | lineage3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4814930 | Other | lineage4.4.1.1 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814986 | Other | lineage4.3.4.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814843 | Other | lineage1.1.3 | None | ERR4816951 | HR-TB | lineage4.1.2.1 | gb | ERR4815919 | Other | lineage4.8 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4815921 | Other | lineage4.3.3 | gb | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816993 | Other | lineage4.3.4.2.1 | None | ERR4816120 | MDR-TB | lineage4.1.3 | None | ERR4816231 | Other | lineage4 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4816464 | Other | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4817380 | Sensitive | lineage3 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816696 | Other | lineage3 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4816699 | Other | lineage4.6 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | RR-TB | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816896 | Sensitive | lineage3 | gb | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR2513378 | Other | lineage3 | None | ERR4818988 | Other | lineage1 | None | ERR4817735 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4817907 | Other | lineage3 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4817919 | Other | lineage4.3.4.1 | gb | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513059 | Other | lineage4.1.1 | gb | ERR4817993 | Other | lineage1.2.2.2 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4819030 | Other | lineage4.6.2.2 | gb | ERR4818180 | Other | lineage4.8 | gb | ERR4818173 | Other | lineage2.2.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2512599 | Other | lineage3 | gb | ERR2512606 | MDR-TB | lineage3 | None | ERR2512698 | Other | lineage1.1.3.1 | gb | ERR4818431 | Other | lineage1.1.2 | gb | ERR2503545 | Sensitive | lineage4.3.3 | fi | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007196 | HR-TB | lineage4.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817533 | Sensitive | lineage4.1.2.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2513356 | Other | lineage4.5 | gb | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR2513652 | Sensitive | lineage4.1.1.3.1 | gb | ERR2513728 | Other | lineage3 | gb | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820284 | Other | lineage4.9 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | ERR4820324 | Other | lineage4 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4820369 | Other | lineage2.2.1 | None | ERR4819498 | Sensitive | lineage4.9 | gb | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819532 | HR-TB | lineage4.6.2.2 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4820787 | Other | lineage3.1.1 | gb | ERR4819655 | Other | lineage4.8 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR2514896 | Other | lineage3 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR2514943 | Other | lineage4.8 | gb | ERR4819955 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR2515027 | Sensitive | lineage4.1.2.1 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820130 | Other | lineage3 | None | ERR4821069 | Other | lineage3 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820193 | Other | lineage3 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821010 | Sensitive | lineage4.2.2.2 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821310 | Other | lineage5 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821209 | Sensitive | lineage4.1.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821325 | Other | lineage3 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822173 | Other | lineage4.7 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821454 | Sensitive | lineage1.1.2 | gb | ERR4821595 | Other | lineage4.1.1.3 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4822232 | Other | lineage4.3.4.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6046152 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045726 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046541 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR4830493 | MDR-TB | lineage2.2.1 | None | ERR4830529 | RR-TB | lineage2.2.1 | za | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046641 | Other | lineage4.8 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6046852 | MDR-TB | lineage3 | None | SRR6785164 | Sensitive | lineage4.1.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | DRR034447 | Sensitive | lineage4.2.2 | None | SRR9971234 | MDR-TB | lineage4.3.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796635 | Other | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR4797872 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR10315635 | RR-TB | lineage2.2.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR10315513 | Sensitive | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18213721 | Other | lineage4.8 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None |
|---|
