EBG00000313339 - n.1001A>G
Drug resistance types
4 Sensitive
16 RR-TB
3 HR-TB
13 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| 1 | |
| lineage4.8 | 10 |
| lineage4.8.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.5 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.9 | 5 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.3 | 7 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.7 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4817060 | Other | None | ERR10796635 | Other | lineage4.8 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR2514173 | Other | lineage4.5 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR867574 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | DRR034447 | Sensitive | lineage4.2.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR6785164 | Sensitive | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796580 | Other | lineage4 | None | SRR7069319 | Other | lineage4.5 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4.7 | None | ERR2514943 | Sensitive | lineage4.8 | gb | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4820256 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None |
|---|
