EBG00000313339 - n.1518G>C


Drug resistance types
7 Sensitive 18 RR-TB 8 HR-TB 14 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 79 Other
lineage Counts
lineage Count
lineage4.9 23
lineage1.1.3.1 2
lineage4.8 9
lineage4.1.2.1 14
lineage4.1.1.3 3
lineage4.3.3 7
lineage4.2.2.2 1
lineage4.4.1.1 1
lineage3 18
3
lineage4.7 1
lineage4.3.1.1 1
lineage4.4.2 1
lineage2.2.1.1 1
lineage4.3.2.1 1
lineage2.2.1 17
lineage1.1.3.3 1
lineage2.2.2 1
lineage4.3 1
lineage1.1.1.1 1
lineage5.1.1 1
lineage4.3.4.2.1 5
lineage4 5
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.8.1 1
lineage3.1.2 1
lineage4.5 1
lineage1.1.1 1
lineage4.6.5 1
lineage5 1
lineage4.1 1
lineage3.1.2.1 2
lineage1.2.1.1 1
lineage4.1.2 1
lineage4.6 1
lineage3.1.1 3
lineage4.6.2.2 2
lineage4.3.4.2 1
lineage4.3.2 1
lineage4;lineage3.1.2.1 1
spoligotype Counts
spoligotype Count
None 139
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4821172 RR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821286 Other lineage4.8 None
ERR4822114 Other lineage4.1.2.1 None
ERR4822170 Other lineage4.1.1.3 None
SRR6045705 Other lineage4.9 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044784 MDR-TB lineage3 None
SRR6045379 Other None
SRR6046246 Other lineage3 None
SRR6046250 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
SRR6046442 Other lineage3 None
SRR6046376 Other lineage3 None
SRR6046839 Other lineage4.9 None
SRR6046815 Other lineage3 None
SRR6046616 Other lineage4.3.1.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6896478 HR-TB lineage4.4.2 None
ERR502478 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR017781 Other lineage3 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971168 Other lineage4.3.2.1 None
ERR10796565 RR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR019855 Other lineage3 None
ERR4819166 Other lineage3 gb
ERR10796564 Other lineage4.3.3 None
ERR10796578 Other lineage2.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR10796596 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR10796636 Other lineage4.1.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6197024 RR-TB lineage4.9 None
ERR9117760 HR-TB lineage4.3 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR751345 Other lineage5.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1049672 Other lineage3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1173515 HR-TB lineage4.9 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173281 RR-TB lineage3 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1173170 Other lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None
SRR16370328 Sensitive lineage3.1.2 None
SRR1184308 Sensitive lineage4.9 None
SRR18002933 Other lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
ERR4814623 Other lineage4.8 None
SRR18003023 Other lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
DRR261040 Sensitive lineage4.5 None
SRR21658550 Other lineage1.1.1 None
SRR22048374 Sensitive lineage4.8 None
SRR18003027 Other lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
ERR4814617 Other lineage1.1.3.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4815452 Other lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
ERR4816967 RR-TB lineage5 None
SRR3675509 Other lineage4.9 None
ERR4814763 Other lineage2.2.1 None
ERR4815502 Other lineage4.1 None
ERR4815022 Other lineage3.1.2.1 None
ERR2228965 Other lineage4.8 None
ERR4816184 Other lineage4.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816232 Other lineage4 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816270 Other lineage4.1.2.1 None
ERR4816531 Other lineage4.1.2 None
ERR4816417 Other lineage4.9 None
ERR4816464 Other lineage3 None
ERR4816782 Other lineage4.1.2.1 None
ERR4816699 Other lineage4.6 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4816856 Other lineage4.1.2.1 None
ERR4818691 Other lineage4.8 None
ERR4819002 HR-TB lineage4.8 None
ERR2228810 RR-TB lineage4 None
ERR4818646 Sensitive lineage4.1.2.1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817874 Other lineage3 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818831 Other lineage3 None
ERR4818548 Other lineage4.3.3 None
ERR4818904 Other lineage4.8 None
ERR4818272 Other lineage4.3.2 None
ERR4819198 Other lineage2.2.1 None
ERR4818570 Other lineage4.3.3 None
ERR4819192 Other lineage3 None
ERR4819307 RR-TB lineage4 None
ERR4820720 Other lineage4.1.2.1 None
ERR4820256 Other lineage2.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR2514261 Other lineage3 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820030 Other lineage4.9 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820151 RR-TB lineage4.8 None
SRR6045516 Other lineage3.1.1 None
ERR4820484 Other lineage4.8 None
ERR2515032 Other lineage3 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821811 RR-TB lineage4.9 None