EBG00000313339 - n.1518G>C
Drug resistance types
12 Sensitive
18 RR-TB
12 HR-TB
14 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
92 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 19 |
| lineage1.1.3.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage1.1.1.1 | 1 |
| lineage4.9 | 24 |
| lineage5.1.1 | 1 |
| lineage4.3 | 1 |
| lineage3 | 23 |
| lineage4.1.2.1 | 18 |
| lineage4.3.3 | 7 |
| lineage4 | 5 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.8.1 | 1 |
| 3 | |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.1.1 | 1 |
| lineage4.8 | 12 |
| lineage1.1.3.1 | 2 |
| lineage4.6.5 | 1 |
| lineage1.2.1.1 | 3 |
| lineage5 | 1 |
| lineage4.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.6 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3.1.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 24 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR16370328 | Sensitive | lineage3.1.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4814623 | Other | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR22048374 | Sensitive | lineage4.8 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815640 | Other | lineage3 | gb | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816068 | HR-TB | lineage1.2.1.1 | gb | ERR4815502 | Other | lineage4.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2228965 | Other | lineage4.8 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816951 | HR-TB | lineage4.1.2.1 | gb | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816232 | Other | lineage4 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816688 | Other | lineage4.2.2.2 | gb | ERR4816464 | Other | lineage3 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4817398 | Other | lineage3.1.1 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2513298 | Other | lineage4.8 | gb | ERR4818272 | Other | lineage4.3.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818831 | Other | lineage3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4819192 | Other | lineage3 | None | ERR2513814 | Sensitive | lineage4.3.4.1 | gb | ERR4820256 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819497 | Sensitive | lineage4.4.1.2 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514261 | Other | lineage3 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514409 | Sensitive | lineage3 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4820891 | Other | lineage4.9 | gb | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4820030 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4820939 | Sensitive | lineage4.2.2.2 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821828 | Other | lineage4.1.2.1 | gb | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045705 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | SRR6045379 | Other | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046246 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046376 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6896478 | HR-TB | lineage4.4.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR017781 | Other | lineage3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR019855 | Other | lineage3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None |
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