lineage | Count |
---|---|
lineage4.1.2.1 | 58 |
lineage4.9 | 36 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage2.2.1 | 62 |
lineage2.2.2 | 6 |
lineage4.2.2 | 2 |
lineage4.5 | 2 |
lineage3 | 56 |
lineage4.8 | 41 |
lineage4.1.1.3 | 10 |
lineage4.3.3 | 21 |
lineage4.4.1.2 | 1 |
lineage6 | 1 |
lineage1.1.2 | 12 |
lineage1.2.2 | 1 |
lineage4.1.1 | 7 |
lineage4.4.2 | 4 |
lineage4.7 | 8 |
lineage3.1.1 | 13 |
lineage4.1.3 | 3 |
lineage4.6.2.2 | 12 |
lineage4.3.4.2.1 | 6 |
lineage1.1.3.1 | 8 |
lineage1.2.1.1 | 2 |
lineage4.1 | 3 |
lineage1.1.3 | 1 |
lineage4.4.1.1 | 15 |
lineage2.2.1.1 | 3 |
lineage4.3.4.2 | 3 |
lineage1.2.2.2 | 7 |
lineage2.2 | 1 |
lineage5 | 2 |
lineage4.2.2.2 | 6 |
9 | |
lineage3.1 | 2 |
La1.8.2 | 1 |
lineage4 | 11 |
lineage4.6.1.2 | 1 |
lineage3.1.2 | 4 |
lineage3.1.2.1 | 3 |
lineage4.1.2 | 6 |
lineage4.6 | 3 |
lineage1 | 2 |
lineage3.1.3 | 4 |
lineage4.3.2 | 4 |
lineage4.1.1.3.1 | 2 |
lineage4.8.2 | 3 |
lineage4.2.1.1 | 1 |
lineage4.3.4.1 | 4 |
lineage4.1.1.2 | 1 |
lineage4;lineage3.1.2.1 | 1 |
lineage4.9;lineage4.8 | 1 |
lineage4.4 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.3.1.1 | 6 |
lineage6.1.3 | 1 |
lineage4.3.2.1 | 4 |
lineage3.1.2.2 | 3 |
lineage4.2.1 | 1 |
lineage1.1.3.3 | 1 |
lineage4.9;lineage3 | 1 |
lineage4.6.5 | 1 |
lineage5.1.1 | 1 |
lineage4.4.1.1.1 | 3 |
lineage4.9;lineage4.3.4 | 1 |
lineage4.3.4 | 1 |
lineage4.9;La1.3 | 1 |
lineage4.3 | 1 |
lineage4.1.4 | 1 |
lineage4.6.3 | 1 |
lineage4.8.1 | 1 |
spoligotype | Count |
---|---|
None | 508 |
ID | Drug resistance | Lineage | Country iso2 | SRR1735591 | Other | lineage4.1.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002938 | Sensitive | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18912070 | Sensitive | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303805 | Other | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304029 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR21595935 | Other | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21595927 | HR-TB | lineage2.2.1 | None | SRR22048392 | Other | lineage4.8 | None | SRR22048374 | Sensitive | lineage4.8 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815613 | Other | lineage3 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815618 | Other | lineage4.8 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR4815301 | Other | lineage4.4.2 | None | SRR6046064 | Other | lineage3 | gb | SRR3675491 | Other | lineage4.7 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814415 | Other | lineage3.1.1 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814497 | HR-TB | lineage4.6.2.2 | None | ERR4814507 | Other | lineage2.2.1 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR4814341 | Other | lineage4.7 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815467 | Other | lineage3 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4814843 | Other | lineage1.1.3 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815005 | Other | lineage4.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675509 | Other | lineage4.9 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4816954 | Other | lineage4.1.2.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815920 | Other | lineage3 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR4816183 | Other | None | ERR4816120 | MDR-TB | lineage4.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4816184 | Other | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | ERR4816231 | Other | lineage4 | None | ERR4817046 | Other | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817060 | RR-TB | None | SRR3675565 | Other | lineage3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816562 | Other | lineage4 | None | ERR4816756 | RR-TB | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816696 | Other | lineage3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816555 | Other | lineage3 | None | ERR4817175 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816690 | Other | None | ERR4816699 | Other | lineage4.6 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816890 | HR-TB | lineage4.6.2.2 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818008 | Other | lineage4.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4817874 | Other | lineage3 | None | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4818752 | Other | lineage3 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4817710 | Other | lineage1.1.2 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4817735 | Other | lineage4.8 | None | ERR2513378 | Other | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4817993 | Other | lineage1.2.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818064 | Other | lineage4.8 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818126 | RR-TB | lineage1 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818190 | Other | lineage4.8 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR2512536 | Other | lineage3.1.3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818355 | Other | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818930 | Other | lineage4.1.2.1 | None | ERR4818556 | Other | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007196 | HR-TB | lineage4.1.2.1 | None | SRR5007186 | Other | lineage4.6 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4819183 | Other | lineage3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR2513929 | Other | lineage4.1.1.2 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR2514261 | Other | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819593 | Other | lineage4.5 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514389 | Other | lineage3 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514533 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514962 | Other | lineage4.4 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4819821 | Other | lineage4.8 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR2514834 | Other | lineage4.7 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4819955 | Other | lineage3 | None | ERR4819982 | RR-TB | lineage2.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820679 | Other | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820130 | Other | lineage3 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | ERR4820161 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821829 | Other | lineage1.1.2 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4821209 | Sensitive | lineage4.1.1 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821325 | Other | lineage3 | None | ERR4821310 | Other | lineage5 | None | ERR4822035 | Other | lineage4.8 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822105 | Other | lineage4.1 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4822173 | Other | lineage4.7 | None | ERR4821595 | Other | lineage4.1.1.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | ERR4821610 | Other | lineage4.3.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822232 | Other | lineage4.3.4.2 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045726 | Other | lineage3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045859 | Other | lineage3 | None | SRR6045778 | Other | lineage3.1 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5818624 | Sensitive | lineage3 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044817 | Other | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6046173 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6046050 | Other | lineage4.3.3 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046246 | Other | lineage3 | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6046250 | Other | lineage4.9 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829289 | Other | lineage4.1.2.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829261 | Other | lineage2.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046815 | Other | lineage3 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046729 | Other | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | SRR6046848 | Other | lineage4.6.5 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131094 | Other | lineage4.3.3 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9971330 | Sensitive | lineage2.2.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971185 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR4819166 | Other | lineage3 | gb | SRR9971223 | Other | lineage2.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR10796557 | Other | lineage4 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796611 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796634 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4821761 | Other | lineage3 | gb | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR3957933 | Sensitive | lineage4.1.1.3 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117686 | HR-TB | lineage3.1.1 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117788 | Other | lineage3 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315513 | Sensitive | lineage2.2.1 | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349153 | RR-TB | lineage4.1.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None |
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