EBG00000313339 - n.979A>C
Drug resistance types
27 Sensitive
28 RR-TB
9 HR-TB
11 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
145 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 6 |
| lineage4.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1 | 19 |
| lineage4.1.2 | 1 |
| lineage3 | 30 |
| lineage4.5 | 2 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.8 | 31 |
| lineage4.3.3 | 10 |
| lineage4.3.4 | 1 |
| lineage4.2.1 | 4 |
| lineage4.4.1.1 | 5 |
| lineage4.1.2.1 | 24 |
| lineage3.1.2.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.7 | 6 |
| lineage3.1.2.2 | 5 |
| lineage4 | 4 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.6.2.2 | 6 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 5 |
| lineage1 | 2 |
| lineage4.2.2.2 | 4 |
| lineage1.2.1.2.1 | 2 |
| lineage5.1.1 | 1 |
| lineage1.1.2 | 4 |
| lineage5 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.1.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8.2 | 2 |
| lineage4.1 | 2 |
| lineage3.1.2 | 4 |
| lineage4.9 | 8 |
| lineage4.4.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| 1 | |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2 | 1 |
| lineage3.1 | 1 |
| lineage3.1.3 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 231 |
Geographic prevalence
Country level data for this variant is available for 71 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117740 | Other | lineage3.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | SRR19304109 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4815804 | Other | lineage4.2.1 | gb | ERR4821812 | Other | lineage4.8 | gb | ERR4814518 | Sensitive | lineage3 | gb | SRR5818667 | Sensitive | lineage4.4.1.1 | dj | SRR6045894 | Other | lineage4.8 | None | ERR2513223 | Sensitive | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR6046246 | Other | lineage3 | None | ERR4816800 | Other | lineage4.8 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046646 | Other | lineage4.7 | gb | ERR4819007 | Other | lineage2.2.1 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6046440 | Other | lineage3.1.2.2 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6046291 | Other | lineage3 | None | SRR3675565 | Other | lineage4 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR2514943 | Other | lineage4.8 | gb | SRR6046208 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR4815178 | Other | lineage4.8 | gb | SRR3675230 | RR-TB | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2513298 | Other | lineage4.8 | gb | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4822085 | Other | lineage4.8 | gb | ERR4818988 | Other | lineage1 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4816758 | Other | lineage4.8 | gb | SRR6044983 | Other | lineage3.1.1 | None | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4821286 | Other | lineage4.8 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR2513160 | Pre-XDR-TB | lineage3 | gb | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6046020 | Other | lineage3 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4820939 | Sensitive | lineage4.2.2.2 | gb | SRR6046359 | Other | lineage4.7 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR4816967 | RR-TB | lineage5 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR5818672 | Other | lineage1.2.2.2 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR5007161 | RR-TB | lineage4.1.1 | None | SRR6046064 | Other | lineage3 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4817761 | Other | lineage4.6.1.1 | gb | SRR6398010 | Sensitive | lineage4.2.1 | ca | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR3675491 | Other | lineage4.7 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR6044904 | Other | lineage3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR6045424 | Other | lineage1.1.2 | None | ERR2512471 | Sensitive | lineage4.1.1.1 | gb | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR2513728 | Other | lineage3 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2514351 | Sensitive | lineage3 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR6046447 | Sensitive | lineage4.8 | gb | ERR4815502 | Other | lineage4.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | SRR6153150 | Other | lineage3.1.1 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR2515027 | Sensitive | lineage4.1.2.1 | gb | ERR4817435 | Other | lineage1.1.3.1 | None | SRR5818648 | Sensitive | lineage4.2.2.2 | dj | ERR4817795 | Other | lineage4.7 | gb | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR4818064 | Other | lineage4.8 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4819166 | Other | lineage3 | gb | SRR14801652 | MDR-TB | lineage4.3.3 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4822150 | Other | lineage4.8 | gb | ERR4829835 | HR-TB | lineage4.8 | it | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4814841 | Other | lineage4.1 | None | SRR6046905 | Other | lineage3 | gb | ERR10796557 | Other | lineage4 | None | ERR2512698 | Other | lineage1.1.3.1 | gb | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4814524 | Other | lineage4.1.1 | gb | SRR6046848 | Other | lineage4.6.5 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4820284 | Other | lineage4.9 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4821371 | Other | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | SRR5818624 | Sensitive | lineage3 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR6045743 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR2514609 | HR-TB | lineage3 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR2514896 | Other | lineage3 | gb | ERR4816232 | Other | lineage4 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4816690 | Other | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4815618 | Other | lineage4.8 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815901 | Other | lineage2.2 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR4819385 | Other | lineage2.2.1 | gb | ERR4819198 | Other | lineage2.2.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821761 | Other | lineage3 | gb | ERR9117763 | HR-TB | lineage3 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR9117678 | Other | lineage4.6.2.2 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6044817 | Other | lineage3 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR2514261 | Other | lineage3 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4814843 | Other | lineage1.1.3 | None | ERR4815919 | Other | lineage4.8 | None | ERR4818200 | Other | lineage3.1.2 | gb | ERR4818548 | Other | lineage4.3.3 | None | ERR4819324 | Other | lineage4.8 | gb | ERR2514834 | Other | lineage4.7 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4818151 | Other | lineage2.2.1 | gb | ERR4818691 | Other | lineage4.8 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4819655 | Other | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820193 | Other | lineage3 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4820864 | Other | lineage4.9;lineage4.8 | None | ERR4830529 | RR-TB | lineage2.2.1 | za | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4829015 | Sensitive | lineage4.6.2.2 | it |
|---|
